RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 GAS2L2Q8NHY3 880 aa19.6■□□□□ 0.73
VARS2-212ENST00000542001 NEUROD6Q96NK8 337 aa19.6■□□□□ 0.73
VARS2-212ENST00000542001 MEIS3Q99687 375 aa19.6■□□□□ 0.73
VARS2-212ENST00000542001 ZNF530Q6P9A1 599 aaPredicted RBP19.6■□□□□ 0.73
VARS2-212ENST00000542001 DTNBO60941 627 aa19.6■□□□□ 0.73
VARS2-212ENST00000542001 NUCB2P80303 420 aa19.6■□□□□ 0.73
VARS2-212ENST00000542001 GNAI3P08754 354 aa19.59■□□□□ 0.73
VARS2-212ENST00000542001 TOMM22Q9NS69 142 aa19.59■□□□□ 0.73
VARS2-212ENST00000542001 ARHGEF12Q9NZN5 1544 aa19.59■□□□□ 0.73
VARS2-212ENST00000542001 NEXNQ0ZGT2 675 aa19.59■□□□□ 0.73
VARS2-212ENST00000542001 PTMSP20962 102 aa19.59■□□□□ 0.73
VARS2-212ENST00000542001 MRE11P49959 708 aa19.59■□□□□ 0.73
VARS2-212ENST00000542001 TTC5Q8N0Z6 440 aa19.59■□□□□ 0.73
VARS2-212ENST00000542001 SYTL4Q96C24 671 aaPredicted RBP19.59■□□□□ 0.73
VARS2-212ENST00000542001 KDM2BQ8NHM5 1336 aa19.59■□□□□ 0.73
VARS2-212ENST00000542001 FIBPO43427 364 aa19.58■□□□□ 0.73
VARS2-212ENST00000542001 GNL2Q13823 731 aaKnown RBP19.58■□□□□ 0.73
VARS2-212ENST00000542001 PANK2Q9BZ23 570 aa19.58■□□□□ 0.73
VARS2-212ENST00000542001 NINLQ9Y2I6 1382 aa19.58■□□□□ 0.73
VARS2-212ENST00000542001 A0A1W2PP64 1363 aa19.58■□□□□ 0.72
VARS2-212ENST00000542001 LRRCC1Q9C099 1032 aa19.57■□□□□ 0.72
VARS2-212ENST00000542001 SMC3Q9UQE7 1217 aa19.57■□□□□ 0.72
VARS2-212ENST00000542001 RAPGEF4Q8WZA2 1011 aa19.57■□□□□ 0.72
VARS2-212ENST00000542001 GCC2Q8IWJ2 1684 aa19.57■□□□□ 0.72
VARS2-212ENST00000542001 CWC27Q6UX04 472 aaKnown RBP19.57■□□□□ 0.72
VARS2-212ENST00000542001 RABEP1Q15276 862 aa19.56■□□□□ 0.72
VARS2-212ENST00000542001 TNPO1Q92973 898 aaKnown RBP19.56■□□□□ 0.72
VARS2-212ENST00000542001 AMOTL2Q9Y2J4 779 aa19.56■□□□□ 0.72
VARS2-212ENST00000542001 ERC2O15083 957 aa19.56■□□□□ 0.72
VARS2-212ENST00000542001 ZKSCAN1P17029 563 aaPredicted RBP19.56■□□□□ 0.72
VARS2-212ENST00000542001 CLASRPQ8N2M8 674 aaKnown RBP19.56■□□□□ 0.72
VARS2-212ENST00000542001 IFT57Q9NWB7 429 aa19.56■□□□□ 0.72
VARS2-212ENST00000542001 GRPEL1Q9HAV7 217 aa19.56■□□□□ 0.72
VARS2-212ENST00000542001 GDPD2Q9HCC8 539 aa19.56■□□□□ 0.72
VARS2-212ENST00000542001 ACEP12821 1306 aa19.55■□□□□ 0.72
VARS2-212ENST00000542001 POLR3AO14802 1390 aaPredicted RBP19.55■□□□□ 0.72
VARS2-212ENST00000542001 SHANK2Q9UPX8 1470 aa19.55■□□□□ 0.72
VARS2-212ENST00000542001 MPRIPQ6WCQ1 1025 aa19.55■□□□□ 0.72
VARS2-212ENST00000542001 ANKRD36BQ8N2N9 1353 aa19.54■□□□□ 0.72
VARS2-212ENST00000542001 H3BQV1 296 aa19.54■□□□□ 0.72
VARS2-212ENST00000542001 STK3Q13188 491 aa19.54■□□□□ 0.72
VARS2-212ENST00000542001 IFFO2Q5TF58 517 aa19.54■□□□□ 0.72
VARS2-212ENST00000542001 JARID2Q92833 1246 aaPredicted RBP19.54■□□□□ 0.72
VARS2-212ENST00000542001 FAM13BQ9NYF5 915 aa19.54■□□□□ 0.72
VARS2-212ENST00000542001 TRIM35Q9UPQ4 493 aa19.54■□□□□ 0.72
VARS2-212ENST00000542001 ALDH1L2Q3SY69 923 aa19.54■□□□□ 0.72
VARS2-212ENST00000542001 SRCIN1Q9C0H9 1055 aa19.54■□□□□ 0.72
VARS2-212ENST00000542001 LRRFIP2Q9Y608 721 aaKnown RBP19.54■□□□□ 0.72
VARS2-212ENST00000542001 OTUD7AQ8TE49 926 aaPredicted RBP19.53■□□□□ 0.72
VARS2-212ENST00000542001 CCDC85AQ96PX6 553 aaPredicted RBP19.53■□□□□ 0.72
VARS2-212ENST00000542001 VAMP4O75379 141 aa19.53■□□□□ 0.72
VARS2-212ENST00000542001 DNAJC2Q99543 621 aaKnown RBP19.53■□□□□ 0.72
VARS2-212ENST00000542001 PLA2R1Q13018 1463 aa19.53■□□□□ 0.72
VARS2-212ENST00000542001 FAM43AQ8N2R8 423 aa19.53■□□□□ 0.72
VARS2-212ENST00000542001 FAM177BA6PVY3 158 aa19.52■□□□□ 0.72
VARS2-212ENST00000542001 HSP90AA2PQ14568 343 aaPredicted RBP19.52■□□□□ 0.72
VARS2-212ENST00000542001 FAM184AQ8NB25 1140 aa19.52■□□□□ 0.72
VARS2-212ENST00000542001 CEBPZQ03701 1054 aaKnown RBP19.52■□□□□ 0.72
VARS2-212ENST00000542001 FSD1Q9BTV5 496 aa19.52■□□□□ 0.72
VARS2-212ENST00000542001 UGGT1Q9NYU2 1555 aa19.52■□□□□ 0.72
VARS2-212ENST00000542001 RSPH6AQ9H0K4 717 aa19.51■□□□□ 0.71
VARS2-212ENST00000542001 CCT4P50991 539 aaKnown RBP19.51■□□□□ 0.71
VARS2-212ENST00000542001 TAF7Q15545 349 aaPredicted RBP19.51■□□□□ 0.71
VARS2-212ENST00000542001 RPAP2Q8IXW5 612 aaPredicted RBP19.51■□□□□ 0.71
VARS2-212ENST00000542001 PIK3C2GO75747 1445 aa19.51■□□□□ 0.71
VARS2-212ENST00000542001 CHAF1AQ13111 956 aaPredicted RBP19.5■□□□□ 0.71
VARS2-212ENST00000542001 RUFY2Q8WXA3 655 aa19.5■□□□□ 0.71
VARS2-212ENST00000542001 ZBTB40Q9NUA8 1239 aa19.5■□□□□ 0.71
VARS2-212ENST00000542001 PPFIA3O75145 1194 aa19.5■□□□□ 0.71
VARS2-212ENST00000542001 NUCB1Q02818 461 aa19.5■□□□□ 0.71
VARS2-212ENST00000542001 R3HCC1Q9Y3T6 440 aaKnown RBP19.49■□□□□ 0.71
VARS2-212ENST00000542001 BCORL1Q5H9F3 1711 aa19.49■□□□□ 0.71
VARS2-212ENST00000542001 SF3A1Q15459 793 aaKnown RBP19.49■□□□□ 0.71
VARS2-212ENST00000542001 DDX58O95786 925 aaKnown RBP19.49■□□□□ 0.71
VARS2-212ENST00000542001 EIF4A2Q14240 407 aaKnown RBP19.49■□□□□ 0.71
VARS2-212ENST00000542001 FERMT3Q86UX7 667 aa19.49■□□□□ 0.71
VARS2-212ENST00000542001 PROSER2Q86WR7 435 aaPredicted RBP19.49■□□□□ 0.71
VARS2-212ENST00000542001 CHMP4AQ9BY43 222 aa19.49■□□□□ 0.71
VARS2-212ENST00000542001 GNAT3A8MTJ3 354 aa19.48■□□□□ 0.71
VARS2-212ENST00000542001 EVA1CP58658 441 aa19.48■□□□□ 0.71
VARS2-212ENST00000542001 BICD2Q8TD16 824 aa19.48■□□□□ 0.71
VARS2-212ENST00000542001 HDAC5Q9UQL6 1122 aa19.48■□□□□ 0.71
VARS2-212ENST00000542001 MRPL50Q8N5N7 158 aaKnown RBP19.48■□□□□ 0.71
VARS2-212ENST00000542001 WDR7Q9Y4E6 1490 aa19.48■□□□□ 0.71
VARS2-212ENST00000542001 KDM5CP41229 1560 aa19.48■□□□□ 0.71
VARS2-212ENST00000542001 BTBD11A6QL63 1104 aa19.47■□□□□ 0.71
VARS2-212ENST00000542001 FLIIQ13045 1269 aa19.47■□□□□ 0.71
VARS2-212ENST00000542001 APPP05067 770 aa19.47■□□□□ 0.71
VARS2-212ENST00000542001 THEMISQ8N1K5 641 aaPredicted RBP19.47■□□□□ 0.71
VARS2-212ENST00000542001 ABCC11Q96J66 1382 aa19.47■□□□□ 0.71
VARS2-212ENST00000542001 SPG7Q9UQ90 795 aa19.47■□□□□ 0.71
VARS2-212ENST00000542001 HDAC1Q13547 482 aaPredicted RBP19.46■□□□□ 0.71
VARS2-212ENST00000542001 CREBRFQ8IUR6 639 aa19.46■□□□□ 0.71
VARS2-212ENST00000542001 CNTROBQ8N137 903 aa19.46■□□□□ 0.71
VARS2-212ENST00000542001 SYCE3A1L190 88 aa19.46■□□□□ 0.71
VARS2-212ENST00000542001 SDSP20132 328 aa19.46■□□□□ 0.71
VARS2-212ENST00000542001 BMP2KLQ5H9B9 411 aa19.46■□□□□ 0.71
VARS2-212ENST00000542001 G2E3Q7L622 706 aa19.46■□□□□ 0.71
VARS2-212ENST00000542001 MX1P20591 662 aa19.46■□□□□ 0.7
VARS2-212ENST00000542001 PIP4K2AP48426 406 aaPredicted RBP19.46■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms