RNA–Protein interactions for RNA: ENST00000541548.5

CUL3-214, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-214ENST00000541548 SLC10A4Q96EP9 437 aa7.62□□□□□ -1.19
CUL3-214ENST00000541548 KCTD15Q96SI1 283 aaPredicted RBP7.62□□□□□ -1.19
CUL3-214ENST00000541548 CAPN5O15484 640 aaPredicted RBP7.61□□□□□ -1.19
CUL3-214ENST00000541548 WDR4P57081 412 aaKnown RBP7.61□□□□□ -1.19
CUL3-214ENST00000541548 NR1H3Q13133 447 aa7.61□□□□□ -1.19
CUL3-214ENST00000541548 ZBTB33Q86T24 672 aa7.61□□□□□ -1.19
CUL3-214ENST00000541548 POM121Q96HA1 1249 aa7.6□□□□□ -1.19
CUL3-214ENST00000541548 ZIC2O95409 532 aaPredicted RBP7.59□□□□□ -1.19
CUL3-214ENST00000541548 PPP1R26Q5T8A7 1209 aaPredicted RBP7.59□□□□□ -1.19
CUL3-214ENST00000541548 CCDC116Q8IYX3 515 aa7.59□□□□□ -1.19
CUL3-214ENST00000541548 MEIOBQ8N635 442 aa7.59□□□□□ -1.19
CUL3-214ENST00000541548 PNMA1Q8ND90 353 aa7.59□□□□□ -1.19
CUL3-214ENST00000541548 GDPD2Q9HCC8 539 aa7.59□□□□□ -1.19
CUL3-214ENST00000541548 COG6Q9Y2V7 657 aa7.59□□□□□ -1.19
CUL3-214ENST00000541548 LILRA1O75019 489 aa7.58□□□□□ -1.2
CUL3-214ENST00000541548 SNRPBP14678 240 aaKnown RBP7.58□□□□□ -1.2
CUL3-214ENST00000541548 KDF1Q8NAX2 398 aaPredicted RBP7.58□□□□□ -1.2
CUL3-214ENST00000541548 TRIM47Q96LD4 638 aa7.58□□□□□ -1.2
CUL3-214ENST00000541548 CDV3Q9UKY7 258 aaKnown RBP7.58□□□□□ -1.2
CUL3-214ENST00000541548 ZNF787Q6DD87 383 aa7.57□□□□□ -1.2
CUL3-214ENST00000541548 Q6ZVU0 165 aa7.57□□□□□ -1.2
CUL3-214ENST00000541548 GIGYF1O75420 1035 aaPredicted RBP7.56□□□□□ -1.2
CUL3-214ENST00000541548 CBLBQ13191 982 aa7.56□□□□□ -1.2
CUL3-214ENST00000541548 NBPF20Q3BBV1 942 aa7.56□□□□□ -1.2
CUL3-214ENST00000541548 TMPRSS4Q9NRS4 437 aa7.56□□□□□ -1.2
CUL3-214ENST00000541548 ERVH48-1M5A8F1 160 aa7.55□□□□□ -1.2
CUL3-214ENST00000541548 APBB1O00213 710 aa7.55□□□□□ -1.2
CUL3-214ENST00000541548 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
CUL3-214ENST00000541548 LCE2CQ5TA81 110 aa7.55□□□□□ -1.2
CUL3-214ENST00000541548 MRPL14Q6P1L8 145 aaKnown RBP7.55□□□□□ -1.2
CUL3-214ENST00000541548 DZIP3Q86Y13 1208 aaKnown RBP7.55□□□□□ -1.2
CUL3-214ENST00000541548 ZNF784Q8NCA9 323 aaPredicted RBP7.55□□□□□ -1.2
CUL3-214ENST00000541548 ZFP42Q96MM3 310 aa7.55□□□□□ -1.2
CUL3-214ENST00000541548 PCDHB9Q9Y5E1 797 aa7.55□□□□□ -1.2
CUL3-214ENST00000541548 EMILIN1Q9Y6C2 1016 aa7.55□□□□□ -1.2
CUL3-214ENST00000541548 ADD1P35611 737 aaKnown RBP7.54□□□□□ -1.2
CUL3-214ENST00000541548 VAC14Q08AM6 782 aa7.53□□□□□ -1.2
CUL3-214ENST00000541548 SEPT12Q8IYM1 358 aa7.53□□□□□ -1.2
CUL3-214ENST00000541548 PHTF2Q8N3S3 785 aa7.53□□□□□ -1.2
CUL3-214ENST00000541548 ABL2P42684 1182 aa7.52□□□□□ -1.21
CUL3-214ENST00000541548 LINC00528Q8N1L1 170 aa7.52□□□□□ -1.21
CUL3-214ENST00000541548 ZNF775Q96BV0 537 aaPredicted RBP7.52□□□□□ -1.21
CUL3-214ENST00000541548 PURBQ96QR8 312 aaKnown RBP7.52□□□□□ -1.21
CUL3-214ENST00000541548 CHIC2Q9UKJ5 165 aa7.52□□□□□ -1.21
CUL3-214ENST00000541548 C11orf95C9JLR9 678 aaPredicted RBP7.51□□□□□ -1.21
CUL3-214ENST00000541548 ADAMTS19Q8TE59 1207 aa7.51□□□□□ -1.21
CUL3-214ENST00000541548 CCDC85AQ96PX6 553 aaPredicted RBP7.51□□□□□ -1.21
CUL3-214ENST00000541548 SCTRP47872 440 aa7.5□□□□□ -1.21
CUL3-214ENST00000541548 RAB15P59190 212 aa7.5□□□□□ -1.21
CUL3-214ENST00000541548 DHX9Q08211 1270 aaKnown RBP7.5□□□□□ -1.21
CUL3-214ENST00000541548 FLIIQ13045 1269 aa7.5□□□□□ -1.21
CUL3-214ENST00000541548 FNBP4Q8N3X1 1017 aaPredicted RBP7.5□□□□□ -1.21
CUL3-214ENST00000541548 CEP126Q9P2H0 1117 aa7.5□□□□□ -1.21
CUL3-214ENST00000541548 ERVK-9P63128 1117 aa7.49□□□□□ -1.21
CUL3-214ENST00000541548 TSGA10IPQ3SY00 556 aa7.49□□□□□ -1.21
CUL3-214ENST00000541548 AGBL1Q96MI9 1066 aa7.49□□□□□ -1.21
CUL3-214ENST00000541548 SENP2Q9HC62 589 aa7.49□□□□□ -1.21
CUL3-214ENST00000541548 PGPEP1Q9NXJ5 209 aa7.49□□□□□ -1.21
CUL3-214ENST00000541548 SOS2Q07890 1332 aaPredicted RBP7.49□□□□□ -1.21
CUL3-214ENST00000541548 SOBPA7XYQ1 873 aa7.48□□□□□ -1.21
CUL3-214ENST00000541548 POM121CA8CG34 1229 aa7.48□□□□□ -1.21
CUL3-214ENST00000541548 SPINT1O43278 529 aa7.48□□□□□ -1.21
CUL3-214ENST00000541548 MCCD1P59942 119 aaPredicted RBP7.48□□□□□ -1.21
CUL3-214ENST00000541548 KIFC2Q96AC6 838 aa7.48□□□□□ -1.21
CUL3-214ENST00000541548 CDCA7Q9BWT1 371 aaPredicted RBP7.48□□□□□ -1.21
CUL3-214ENST00000541548 CYLDQ9NQC7 956 aa7.48□□□□□ -1.21
CUL3-214ENST00000541548 TRAK2O60296 914 aa7.47□□□□□ -1.21
CUL3-214ENST00000541548 ADH1AP07327 375 aa7.47□□□□□ -1.21
CUL3-214ENST00000541548 NFX1Q12986 1120 aaKnown RBP7.47□□□□□ -1.21
CUL3-214ENST00000541548 C6orf118Q5T5N4 469 aa7.47□□□□□ -1.21
CUL3-214ENST00000541548 CLUAP1Q96AJ1 413 aa7.47□□□□□ -1.21
CUL3-214ENST00000541548 ALG2Q9H553 416 aa7.47□□□□□ -1.21
CUL3-214ENST00000541548 DNMT3LQ9UJW3 386 aa7.47□□□□□ -1.21
CUL3-214ENST00000541548 TSEN34Q9BSV6 310 aaKnown RBP7.46□□□□□ -1.22
CUL3-214ENST00000541548 OSBPL3Q9H4L5 887 aa7.46□□□□□ -1.22
CUL3-214ENST00000541548 PIK3CDO00329 1044 aa7.45□□□□□ -1.22
CUL3-214ENST00000541548 WASHC4Q2M389 1173 aa7.45□□□□□ -1.22
CUL3-214ENST00000541548 FOXD4L5Q5VV16 416 aaPredicted RBP7.45□□□□□ -1.22
CUL3-214ENST00000541548 BMP2P12643 396 aa7.44□□□□□ -1.22
CUL3-214ENST00000541548 UBTFP17480 764 aaKnown RBP7.44□□□□□ -1.22
CUL3-214ENST00000541548 CTSOP43234 321 aaPredicted RBP7.44□□□□□ -1.22
CUL3-214ENST00000541548 EIF4G2P78344 907 aaKnown RBP eCLIP7.44□□□□□ -1.22
CUL3-214ENST00000541548 SCARF1Q14162 830 aa7.44□□□□□ -1.22
CUL3-214ENST00000541548 PRM3Q9NNZ6 103 aa7.44□□□□□ -1.22
CUL3-214ENST00000541548 PTGIRP43119 386 aa7.43□□□□□ -1.22
CUL3-214ENST00000541548 RELBQ01201 579 aa7.43□□□□□ -1.22
CUL3-214ENST00000541548 CC2D2BQ6DHV5 1058 aa7.43□□□□□ -1.22
CUL3-214ENST00000541548 UCN2Q96RP3 112 aa7.43□□□□□ -1.22
CUL3-214ENST00000541548 ZNF330Q9Y3S2 320 aaPredicted RBP7.43□□□□□ -1.22
CUL3-214ENST00000541548 PCDHB11Q9Y5F2 797 aa7.43□□□□□ -1.22
CUL3-214ENST00000541548 RNF20Q5VTR2 975 aa7.42□□□□□ -1.22
CUL3-214ENST00000541548 CCDC125Q86Z20 511 aa7.42□□□□□ -1.22
CUL3-214ENST00000541548 RNF217Q8TC41 542 aa7.42□□□□□ -1.22
CUL3-214ENST00000541548 INSM2Q96T92 566 aaPredicted RBP7.42□□□□□ -1.22
CUL3-214ENST00000541548 SOX11P35716 441 aa7.41□□□□□ -1.22
CUL3-214ENST00000541548 ZNF592Q92610 1267 aa7.41□□□□□ -1.22
CUL3-214ENST00000541548 ZNF395Q9H8N7 513 aaPredicted RBP7.41□□□□□ -1.22
CUL3-214ENST00000541548 HRH3Q9Y5N1 445 aa7.41□□□□□ -1.22
CUL3-214ENST00000541548 A6NJR5 290 aa7.4□□□□□ -1.22
CUL3-214ENST00000541548 TTLL8A6PVC2 850 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms