RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 SMTNL1A8MU46 457 aa17.72■□□□□ 0.43
SMARCA4-207ENST00000541122 OFD1O75665 1012 aa17.72■□□□□ 0.43
SMARCA4-207ENST00000541122 NOL10Q9BSC4 688 aaKnown RBP17.72■□□□□ 0.43
SMARCA4-207ENST00000541122 GOLGA6L10A6NI86 522 aa17.72■□□□□ 0.43
SMARCA4-207ENST00000541122 MAGEC2Q9UBF1 373 aaPredicted RBP17.72■□□□□ 0.43
SMARCA4-207ENST00000541122 TNPO1Q92973 898 aaKnown RBP17.71■□□□□ 0.43
SMARCA4-207ENST00000541122 PTPN14Q15678 1187 aa17.71■□□□□ 0.43
SMARCA4-207ENST00000541122 SART3Q15020 963 aaKnown RBP17.71■□□□□ 0.43
SMARCA4-207ENST00000541122 TTLL5Q6EMB2 1281 aa17.71■□□□□ 0.43
SMARCA4-207ENST00000541122 GOLGA6L7A0A1B0GV03 622 aa17.71■□□□□ 0.42
SMARCA4-207ENST00000541122 NEMFO60524 1076 aa17.71■□□□□ 0.42
SMARCA4-207ENST00000541122 WASHC4Q2M389 1173 aa17.71■□□□□ 0.42
SMARCA4-207ENST00000541122 NUTM2FA1L443 756 aa17.7■□□□□ 0.42
SMARCA4-207ENST00000541122 CBX1P83916 185 aa17.7■□□□□ 0.42
SMARCA4-207ENST00000541122 FILIP1Q7Z7B0 1213 aa17.7■□□□□ 0.42
SMARCA4-207ENST00000541122 LRPPRCP42704 1394 aaKnown RBP17.7■□□□□ 0.42
SMARCA4-207ENST00000541122 GTF2E1P29083 439 aaPredicted RBP17.7■□□□□ 0.42
SMARCA4-207ENST00000541122 ME1P48163 572 aa17.7■□□□□ 0.42
SMARCA4-207ENST00000541122 KIF18AQ8NI77 898 aa17.7■□□□□ 0.42
SMARCA4-207ENST00000541122 XPCQ01831 940 aaPredicted RBP17.7■□□□□ 0.42
SMARCA4-207ENST00000541122 LUC7LQ9NQ29 371 aaKnown RBP17.7■□□□□ 0.42
SMARCA4-207ENST00000541122 MPNDQ8N594 471 aa17.7■□□□□ 0.42
SMARCA4-207ENST00000541122 ZMYND15Q9H091 742 aa17.7■□□□□ 0.42
SMARCA4-207ENST00000541122 NBPF1Q3BBV0 1214 aa17.69■□□□□ 0.42
SMARCA4-207ENST00000541122 UPF3BQ9BZI7 483 aaKnown RBP17.69■□□□□ 0.42
SMARCA4-207ENST00000541122 UVSSAQ2YD98 709 aa17.69■□□□□ 0.42
SMARCA4-207ENST00000541122 TXLNAP40222 546 aa17.69■□□□□ 0.42
SMARCA4-207ENST00000541122 RIC3Q7Z5B4 369 aa17.69■□□□□ 0.42
SMARCA4-207ENST00000541122 ERLIN2O94905 339 aa17.69■□□□□ 0.42
SMARCA4-207ENST00000541122 PDRG1Q9NUG6 133 aa17.69■□□□□ 0.42
SMARCA4-207ENST00000541122 ERICH4A6NGS2 130 aa17.68■□□□□ 0.42
SMARCA4-207ENST00000541122 NEUROD6Q96NK8 337 aa17.68■□□□□ 0.42
SMARCA4-207ENST00000541122 NCOA1Q15788 1441 aa17.68■□□□□ 0.42
SMARCA4-207ENST00000541122 SYNJ1O43426 1573 aa17.68■□□□□ 0.42
SMARCA4-207ENST00000541122 EPS15P42566 896 aa17.68■□□□□ 0.42
SMARCA4-207ENST00000541122 KRT32Q14532 448 aa17.68■□□□□ 0.42
SMARCA4-207ENST00000541122 KLHL40Q2TBA0 621 aa17.68■□□□□ 0.42
SMARCA4-207ENST00000541122 CABP2Q9NPB3 220 aa17.68■□□□□ 0.42
SMARCA4-207ENST00000541122 NCBP3Q53F19 620 aaKnown RBP17.68■□□□□ 0.42
SMARCA4-207ENST00000541122 BLOC1S2Q6QNY1 142 aa17.67■□□□□ 0.42
SMARCA4-207ENST00000541122 NAIPQ13075 1403 aa17.67■□□□□ 0.42
SMARCA4-207ENST00000541122 ZSCAN12O43309 604 aa17.67■□□□□ 0.42
SMARCA4-207ENST00000541122 TBC1D32Q96NH3 1257 aa17.66■□□□□ 0.42
SMARCA4-207ENST00000541122 PRDM10Q9NQV6 1147 aa17.66■□□□□ 0.42
SMARCA4-207ENST00000541122 SUPT6HQ7KZ85 1726 aaKnown RBP17.66■□□□□ 0.42
SMARCA4-207ENST00000541122 CEBPZQ03701 1054 aaKnown RBP17.65■□□□□ 0.42
SMARCA4-207ENST00000541122 SCAND2PQ9GZW5 306 aaPredicted RBP17.65■□□□□ 0.42
SMARCA4-207ENST00000541122 FAM107BQ9H098 131 aa17.65■□□□□ 0.42
SMARCA4-207ENST00000541122 SFPQP23246 707 aaKnown RBP eCLIP17.65■□□□□ 0.42
SMARCA4-207ENST00000541122 ABCC11Q96J66 1382 aa17.65■□□□□ 0.42
SMARCA4-207ENST00000541122 CT47A1Q5JQC4 288 aaPredicted RBP17.65■□□□□ 0.42
SMARCA4-207ENST00000541122 ALDH1L2Q3SY69 923 aa17.64■□□□□ 0.41
SMARCA4-207ENST00000541122 HSP90AB3PQ58FF7 597 aa17.64■□□□□ 0.41
SMARCA4-207ENST00000541122 CFAP70Q5T0N1 1121 aa17.64■□□□□ 0.41
SMARCA4-207ENST00000541122 PRDM2Q13029 1718 aa17.64■□□□□ 0.41
SMARCA4-207ENST00000541122 G3V3G9 751 aa17.64■□□□□ 0.41
SMARCA4-207ENST00000541122 SSFA2P28290 1259 aa17.64■□□□□ 0.41
SMARCA4-207ENST00000541122 DCAF8Q5TAQ9 597 aa17.64■□□□□ 0.41
SMARCA4-207ENST00000541122 C9orf84Q5VXU9 1444 aa17.64■□□□□ 0.41
SMARCA4-207ENST00000541122 RARSP54136 660 aaKnown RBP17.64■□□□□ 0.41
SMARCA4-207ENST00000541122 CCDC181Q5TID7 509 aa17.64■□□□□ 0.41
SMARCA4-207ENST00000541122 SLC4A2P04920 1241 aa17.64■□□□□ 0.41
SMARCA4-207ENST00000541122 TMEM57Q8N5G2 664 aa17.64■□□□□ 0.41
SMARCA4-207ENST00000541122 CCDC102AQ96A19 550 aa17.64■□□□□ 0.41
SMARCA4-207ENST00000541122 ZRSR2Q15696 482 aaKnown RBP17.63■□□□□ 0.41
SMARCA4-207ENST00000541122 MAP3K1Q13233 1512 aa17.63■□□□□ 0.41
SMARCA4-207ENST00000541122 DAPK1P53355 1430 aa17.63■□□□□ 0.41
SMARCA4-207ENST00000541122 GPRASP1Q5JY77 1395 aa17.63■□□□□ 0.41
SMARCA4-207ENST00000541122 STIM1Q13586 685 aa17.63■□□□□ 0.41
SMARCA4-207ENST00000541122 MCM3P25205 808 aa17.63■□□□□ 0.41
SMARCA4-207ENST00000541122 C20orf194Q5TEA3 1177 aa17.63■□□□□ 0.41
SMARCA4-207ENST00000541122 SH2B1Q9NRF2 756 aaPredicted RBP17.63■□□□□ 0.41
SMARCA4-207ENST00000541122 ANO10Q9NW15 660 aa17.63■□□□□ 0.41
SMARCA4-207ENST00000541122 TBC1D2BQ9UPU7 963 aa17.62■□□□□ 0.41
SMARCA4-207ENST00000541122 JAKMIP1Q96N16 626 aaKnown RBP17.62■□□□□ 0.41
SMARCA4-207ENST00000541122 ANKRD30BQ9BXX2 1392 aa17.62■□□□□ 0.41
SMARCA4-207ENST00000541122 CTAGE5O15320 804 aa17.62■□□□□ 0.41
SMARCA4-207ENST00000541122 BRPF1P55201 1214 aaPredicted RBP17.62■□□□□ 0.41
SMARCA4-207ENST00000541122 HECW1Q76N89 1606 aa17.61■□□□□ 0.41
SMARCA4-207ENST00000541122 TNNT1P13805 278 aa17.61■□□□□ 0.41
SMARCA4-207ENST00000541122 HSP90AB2PQ58FF8 381 aa17.61■□□□□ 0.41
SMARCA4-207ENST00000541122 PPP4R3BQ5MIZ7 849 aa17.61■□□□□ 0.41
SMARCA4-207ENST00000541122 MAP9Q49MG5 647 aa17.61■□□□□ 0.41
SMARCA4-207ENST00000541122 CDKL5O76039 1030 aa17.61■□□□□ 0.41
SMARCA4-207ENST00000541122 RAD54L2Q9Y4B4 1467 aa17.61■□□□□ 0.41
SMARCA4-207ENST00000541122 FCHSD2O94868 740 aa17.61■□□□□ 0.41
SMARCA4-207ENST00000541122 HS1BP3Q53T59 392 aa17.61■□□□□ 0.41
SMARCA4-207ENST00000541122 CAVIN2O95810 425 aa17.6■□□□□ 0.41
SMARCA4-207ENST00000541122 DNAJC2Q99543 621 aaKnown RBP17.6■□□□□ 0.41
SMARCA4-207ENST00000541122 SHTN1A0MZ66 631 aa17.6■□□□□ 0.41
SMARCA4-207ENST00000541122 BAG4O95429 457 aaKnown RBP17.6■□□□□ 0.41
SMARCA4-207ENST00000541122 GSDMDP57764 484 aa17.6■□□□□ 0.41
SMARCA4-207ENST00000541122 PAXBP1Q9Y5B6 917 aa17.6■□□□□ 0.41
SMARCA4-207ENST00000541122 TOP2BQ02880 1626 aa17.6■□□□□ 0.41
SMARCA4-207ENST00000541122 CCDC148Q8NFR7 591 aa17.6■□□□□ 0.41
SMARCA4-207ENST00000541122 TRIM22Q8IYM9 498 aa17.6■□□□□ 0.41
SMARCA4-207ENST00000541122 TCEAL9Q9UHQ7 104 aa17.6■□□□□ 0.41
SMARCA4-207ENST00000541122 POTEB2H3BUK9 544 aa17.59■□□□□ 0.41
SMARCA4-207ENST00000541122 VPS37DQ86XT2 251 aa17.59■□□□□ 0.41
SMARCA4-207ENST00000541122 FAM177A1Q8N128 213 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms