RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 CDCA8Q53HL2 280 aa19.83■□□□□ 0.77
LTBR-209ENST00000541102 CSB-PGBD3P0DP91 1061 aa19.82■□□□□ 0.76
LTBR-209ENST00000541102 PDE3BQ13370 1112 aa19.82■□□□□ 0.76
LTBR-209ENST00000541102 DEFB132Q7Z7B7 95 aa19.82■□□□□ 0.76
LTBR-209ENST00000541102 EIF4G2P78344 907 aaKnown RBP eCLIP19.81■□□□□ 0.76
LTBR-209ENST00000541102 THRAP3Q9Y2W1 955 aaKnown RBP19.81■□□□□ 0.76
LTBR-209ENST00000541102 CRB1P82279 1406 aa19.81■□□□□ 0.76
LTBR-209ENST00000541102 THSD7AQ9UPZ6 1657 aa19.81■□□□□ 0.76
LTBR-209ENST00000541102 WDR17Q8IZU2 1322 aa19.79■□□□□ 0.76
LTBR-209ENST00000541102 NFAT5O94916 1531 aa19.79■□□□□ 0.76
LTBR-209ENST00000541102 COL18A1P39060 1754 aa19.79■□□□□ 0.76
LTBR-209ENST00000541102 COG3Q96JB2 828 aa19.78■□□□□ 0.76
LTBR-209ENST00000541102 POLR3GLQ9BT43 218 aa19.78■□□□□ 0.76
LTBR-209ENST00000541102 ANKRD36BQ8N2N9 1353 aa19.78■□□□□ 0.76
LTBR-209ENST00000541102 EP400Q96L91 3159 aa19.78■□□□□ 0.76
LTBR-209ENST00000541102 FAM196AQ6ZSG2 479 aa19.77■□□□□ 0.76
LTBR-209ENST00000541102 C11orf95C9JLR9 678 aaPredicted RBP19.76■□□□□ 0.75
LTBR-209ENST00000541102 RGPD5Q99666 1765 aa19.75■□□□□ 0.75
LTBR-209ENST00000541102 BAG6P46379 1132 aa19.75■□□□□ 0.75
LTBR-209ENST00000541102 CARD10Q9BWT7 1032 aa19.75■□□□□ 0.75
LTBR-209ENST00000541102 TRIM37O94972 964 aa19.74■□□□□ 0.75
LTBR-209ENST00000541102 FBLN1P23142 703 aa19.74■□□□□ 0.75
LTBR-209ENST00000541102 OVOS2A0A0J9YW53 1432 aa19.74■□□□□ 0.75
LTBR-209ENST00000541102 OVOS2Q6IE36 1432 aa19.74■□□□□ 0.75
LTBR-209ENST00000541102 ZEB1P37275 1124 aaPredicted RBP19.73■□□□□ 0.75
LTBR-209ENST00000541102 DDB1Q16531 1140 aa19.73■□□□□ 0.75
LTBR-209ENST00000541102 GGNBP2Q9H3C7 697 aa19.73■□□□□ 0.75
LTBR-209ENST00000541102 NLRP2Q9NX02 1062 aa19.73■□□□□ 0.75
LTBR-209ENST00000541102 USP54Q70EL1 1684 aa19.72■□□□□ 0.75
LTBR-209ENST00000541102 FYB1O15117 783 aa19.72■□□□□ 0.75
LTBR-209ENST00000541102 EN1Q05925 392 aaPredicted RBP19.72■□□□□ 0.75
LTBR-209ENST00000541102 ANKRD24Q8TF21 1146 aa19.71■□□□□ 0.75
LTBR-209ENST00000541102 LTV1Q96GA3 475 aaPredicted RBP19.71■□□□□ 0.75
LTBR-209ENST00000541102 CDCA7Q9BWT1 371 aaPredicted RBP19.7■□□□□ 0.74
LTBR-209ENST00000541102 CARD14Q9BXL6 1004 aa19.7■□□□□ 0.74
LTBR-209ENST00000541102 AMPHP49418 695 aa19.69■□□□□ 0.74
LTBR-209ENST00000541102 IP6K1Q92551 441 aa19.69■□□□□ 0.74
LTBR-209ENST00000541102 LTN1O94822 1766 aa19.69■□□□□ 0.74
LTBR-209ENST00000541102 ERBB3P21860 1342 aa19.69■□□□□ 0.74
LTBR-209ENST00000541102 APBA3O96018 575 aa19.68■□□□□ 0.74
LTBR-209ENST00000541102 MAP3K19Q56UN5 1328 aa19.68■□□□□ 0.74
LTBR-209ENST00000541102 CCDC7Q96M83 1385 aa19.68■□□□□ 0.74
LTBR-209ENST00000541102 ABCC6O95255 1503 aa19.67■□□□□ 0.74
LTBR-209ENST00000541102 EXOC5O00471 708 aa19.67■□□□□ 0.74
LTBR-209ENST00000541102 PARP4Q9UKK3 1724 aaKnown RBP19.67■□□□□ 0.74
LTBR-209ENST00000541102 RGPD1P0DJD0 1748 aa19.66■□□□□ 0.74
LTBR-209ENST00000541102 RRS1Q15050 365 aaKnown RBP19.66■□□□□ 0.74
LTBR-209ENST00000541102 EZH2Q15910 746 aaKnown RBP19.65■□□□□ 0.74
LTBR-209ENST00000541102 MARCH10Q8NA82 808 aaPredicted RBP19.65■□□□□ 0.74
LTBR-209ENST00000541102 NSD3Q9BZ95 1437 aa19.65■□□□□ 0.74
LTBR-209ENST00000541102 MYOM1P52179 1685 aa19.65■□□□□ 0.74
LTBR-209ENST00000541102 HOXC9P31274 260 aa19.64■□□□□ 0.73
LTBR-209ENST00000541102 OVOS2A0A0G2JMS6 1433 aa19.62■□□□□ 0.73
LTBR-209ENST00000541102 DISP2A7MBM2 1401 aa19.62■□□□□ 0.73
LTBR-209ENST00000541102 KIF7Q2M1P5 1343 aa19.62■□□□□ 0.73
LTBR-209ENST00000541102 IL2RBP14784 551 aa19.62■□□□□ 0.73
LTBR-209ENST00000541102 CAMKK2Q96RR4 588 aa19.62■□□□□ 0.73
LTBR-209ENST00000541102 LRRC37A3O60309 1634 aa19.62■□□□□ 0.73
LTBR-209ENST00000541102 TNS1Q9HBL0 1735 aaKnown RBP19.6■□□□□ 0.73
LTBR-209ENST00000541102 PSDA5PKW4 1024 aaPredicted RBP19.6■□□□□ 0.73
LTBR-209ENST00000541102 CGNL1Q0VF96 1302 aa19.59■□□□□ 0.73
LTBR-209ENST00000541102 WASHC2AQ641Q2 1341 aa19.59■□□□□ 0.73
LTBR-209ENST00000541102 PTF1AQ7RTS3 328 aa19.59■□□□□ 0.73
LTBR-209ENST00000541102 PANK3Q9H999 370 aa19.59■□□□□ 0.73
LTBR-209ENST00000541102 WNK3Q9BYP7 1800 aa19.59■□□□□ 0.73
LTBR-209ENST00000541102 KIF20BQ96Q89 1820 aa19.58■□□□□ 0.73
LTBR-209ENST00000541102 HSP90AB2PQ58FF8 381 aa19.57■□□□□ 0.72
LTBR-209ENST00000541102 BCL11BQ9C0K0 894 aaPredicted RBP19.57■□□□□ 0.72
LTBR-209ENST00000541102 PPM1GO15355 546 aaPredicted RBP19.56■□□□□ 0.72
LTBR-209ENST00000541102 PEAK1Q9H792 1746 aa19.56■□□□□ 0.72
LTBR-209ENST00000541102 RTL1A6NKG5 1358 aa19.56■□□□□ 0.72
LTBR-209ENST00000541102 R3HDM1Q15032 1099 aaKnown RBP19.55■□□□□ 0.72
LTBR-209ENST00000541102 EMILIN1Q9Y6C2 1016 aa19.55■□□□□ 0.72
LTBR-209ENST00000541102 TNS2Q63HR2 1409 aa19.54■□□□□ 0.72
LTBR-209ENST00000541102 TNNT2P45379 298 aaPredicted RBP19.54■□□□□ 0.72
LTBR-209ENST00000541102 NBPF6Q5VWK0 638 aa19.54■□□□□ 0.72
LTBR-209ENST00000541102 USHBP1Q8N6Y0 703 aa19.54■□□□□ 0.72
LTBR-209ENST00000541102 DDX54Q8TDD1 881 aaKnown RBP19.54■□□□□ 0.72
LTBR-209ENST00000541102 ACSBG1Q96GR2 724 aa19.54■□□□□ 0.72
LTBR-209ENST00000541102 NBPF4Q96M43 638 aa19.54■□□□□ 0.72
LTBR-209ENST00000541102 PARD3Q8TEW0 1356 aa19.53■□□□□ 0.72
LTBR-209ENST00000541102 KCNQ2O43526 872 aa19.52■□□□□ 0.72
LTBR-209ENST00000541102 FLT4P35916 1363 aa19.52■□□□□ 0.72
LTBR-209ENST00000541102 SMG6Q86US8 1419 aaKnown RBP19.51■□□□□ 0.71
LTBR-209ENST00000541102 SBF2Q86WG5 1849 aa19.51■□□□□ 0.71
LTBR-209ENST00000541102 INSRP06213 1382 aa19.51■□□□□ 0.71
LTBR-209ENST00000541102 BCL9O00512 1426 aa19.51■□□□□ 0.71
LTBR-209ENST00000541102 NBPF14Q5TI25 921 aa19.5■□□□□ 0.71
LTBR-209ENST00000541102 RGPD2P0DJD1 1756 aa19.49■□□□□ 0.71
LTBR-209ENST00000541102 FAM208AQ9UK61 1670 aaKnown RBP19.49■□□□□ 0.71
LTBR-209ENST00000541102 KIF24Q5T7B8 1368 aa19.49■□□□□ 0.71
LTBR-209ENST00000541102 KAT6BQ8WYB5 2073 aa19.49■□□□□ 0.71
LTBR-209ENST00000541102 PLSCR1O15162 318 aa19.49■□□□□ 0.71
LTBR-209ENST00000541102 ZCRB1Q8TBF4 217 aaKnown RBP19.49■□□□□ 0.71
LTBR-209ENST00000541102 RAPGEF4Q8WZA2 1011 aa19.48■□□□□ 0.71
LTBR-209ENST00000541102 POLKQ9UBT6 870 aa19.48■□□□□ 0.71
LTBR-209ENST00000541102 KNSTRNQ9Y448 316 aa19.48■□□□□ 0.71
LTBR-209ENST00000541102 TATP17735 454 aaPredicted RBP19.46■□□□□ 0.71
LTBR-209ENST00000541102 MORC1Q86VD1 984 aa19.46■□□□□ 0.71
LTBR-209ENST00000541102 PROM2Q8N271 834 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms