RNA–Protein interactions for RNA: ENST00000540801.5

SSH2-204, Transcript of slingshot protein phosphatase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH2, Length 4,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-204ENST00000540801 VAMP4O75379 141 aa8.09□□□□□ -1.11
SSH2-204ENST00000540801 NPM1P06748 294 aaKnown RBP eCLIP8.09□□□□□ -1.11
SSH2-204ENST00000540801 MS4A1P11836 297 aa8.09□□□□□ -1.11
SSH2-204ENST00000540801 NOB1Q9ULX3 412 aaKnown RBP8.09□□□□□ -1.11
SSH2-204ENST00000540801 MLECQ14165 292 aa8.09□□□□□ -1.11
SSH2-204ENST00000540801 FRAT1Q92837 279 aaPredicted RBP8.09□□□□□ -1.11
SSH2-204ENST00000540801 ESF1Q9H501 851 aaKnown RBP8.09□□□□□ -1.11
SSH2-204ENST00000540801 C16orf71Q8IYS4 520 aaPredicted RBP8.08□□□□□ -1.12
SSH2-204ENST00000540801 STAC3Q96MF2 364 aa8.08□□□□□ -1.12
SSH2-204ENST00000540801 PIK3R4Q99570 1358 aa8.08□□□□□ -1.12
SSH2-204ENST00000540801 C5P01031 1676 aa8.08□□□□□ -1.12
SSH2-204ENST00000540801 KDM3BQ7LBC6 1761 aa8.08□□□□□ -1.12
SSH2-204ENST00000540801 ZBTB7BO15156 539 aaPredicted RBP8.08□□□□□ -1.12
SSH2-204ENST00000540801 WDR43Q15061 677 aaKnown RBP eCLIP8.08□□□□□ -1.12
SSH2-204ENST00000540801 RBM42Q9BTD8 480 aaKnown RBP8.08□□□□□ -1.12
SSH2-204ENST00000540801 BRPF3Q9ULD4 1205 aa8.08□□□□□ -1.12
SSH2-204ENST00000540801 ARHGAP23Q9P227 1491 aa8.08□□□□□ -1.12
SSH2-204ENST00000540801 NUTM2FA1L443 756 aa8.08□□□□□ -1.12
SSH2-204ENST00000540801 NFKBIBQ15653 356 aa8.08□□□□□ -1.12
SSH2-204ENST00000540801 CENPQQ7L2Z9 268 aaPredicted RBP8.08□□□□□ -1.12
SSH2-204ENST00000540801 CDK12Q9NYV4 1490 aaPredicted RBP8.08□□□□□ -1.12
SSH2-204ENST00000540801 DIP2AQ14689 1571 aa8.07□□□□□ -1.12
SSH2-204ENST00000540801 HSP90AB2PQ58FF8 381 aa8.07□□□□□ -1.12
SSH2-204ENST00000540801 MBIPQ9NS73 344 aa8.07□□□□□ -1.12
SSH2-204ENST00000540801 MIS18AQ9NYP9 233 aa8.07□□□□□ -1.12
SSH2-204ENST00000540801 NCOA3Q9Y6Q9 1424 aa8.07□□□□□ -1.12
SSH2-204ENST00000540801 GSPT1P15170 499 aaKnown RBP8.07□□□□□ -1.12
SSH2-204ENST00000540801 CGNL1Q0VF96 1302 aa8.07□□□□□ -1.12
SSH2-204ENST00000540801 TRPM3Q9HCF6 1732 aaPredicted RBP8.07□□□□□ -1.12
SSH2-204ENST00000540801 PTCH1Q13635 1447 aa8.06□□□□□ -1.12
SSH2-204ENST00000540801 U2AF1L5P0DN76 240 aaPredicted RBP8.06□□□□□ -1.12
SSH2-204ENST00000540801 U2AF1Q01081 240 aaKnown RBP eCLIP8.06□□□□□ -1.12
SSH2-204ENST00000540801 POGKQ9P215 609 aa8.06□□□□□ -1.12
SSH2-204ENST00000540801 MED1Q15648 1581 aaPredicted RBP8.06□□□□□ -1.12
SSH2-204ENST00000540801 PDE3AQ14432 1141 aa8.06□□□□□ -1.12
SSH2-204ENST00000540801 WDR63Q8IWG1 891 aa8.06□□□□□ -1.12
SSH2-204ENST00000540801 TBC1D2Q9BYX2 928 aa8.06□□□□□ -1.12
SSH2-204ENST00000540801 EVC2Q86UK5 1308 aa8.06□□□□□ -1.12
SSH2-204ENST00000540801 SLIT1O75093 1534 aa8.06□□□□□ -1.12
SSH2-204ENST00000540801 ELL2O00472 640 aaPredicted RBP8.06□□□□□ -1.12
SSH2-204ENST00000540801 PRKAR2BP31323 418 aa8.06□□□□□ -1.12
SSH2-204ENST00000540801 MVPQ14764 893 aaKnown RBP8.06□□□□□ -1.12
SSH2-204ENST00000540801 PUS7Q96PZ0 661 aaKnown RBP8.06□□□□□ -1.12
SSH2-204ENST00000540801 NFAT5O94916 1531 aa8.05□□□□□ -1.12
SSH2-204ENST00000540801 SLC52A1Q9NWF4 448 aa8.05□□□□□ -1.12
SSH2-204ENST00000540801 VGFO15240 615 aaPredicted RBP8.05□□□□□ -1.12
SSH2-204ENST00000540801 G2E3Q7L622 706 aa8.05□□□□□ -1.12
SSH2-204ENST00000540801 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.05□□□□□ -1.12
SSH2-204ENST00000540801 MRPL50Q8N5N7 158 aaKnown RBP8.05□□□□□ -1.12
SSH2-204ENST00000540801 DTNBO60941 627 aa8.04□□□□□ -1.12
SSH2-204ENST00000540801 EIF4A2Q14240 407 aaKnown RBP8.04□□□□□ -1.12
SSH2-204ENST00000540801 FAM161AQ3B820 660 aa8.04□□□□□ -1.12
SSH2-204ENST00000540801 TMEM2Q9UHN6 1383 aa8.04□□□□□ -1.12
SSH2-204ENST00000540801 WASLO00401 505 aaPredicted RBP8.04□□□□□ -1.12
SSH2-204ENST00000540801 TBC1D32Q96NH3 1257 aa8.04□□□□□ -1.12
SSH2-204ENST00000540801 SRPK2P78362 688 aaKnown RBP8.04□□□□□ -1.12
SSH2-204ENST00000540801 SMC5Q8IY18 1101 aa8.04□□□□□ -1.12
SSH2-204ENST00000540801 ADAMTS7Q9UKP4 1686 aa8.04□□□□□ -1.12
SSH2-204ENST00000540801 COL18A1P39060 1754 aa8.04□□□□□ -1.12
SSH2-204ENST00000540801 MAP3K19Q56UN5 1328 aa8.04□□□□□ -1.12
SSH2-204ENST00000540801 SHANK3Q9BYB0 1731 aa8.03□□□□□ -1.12
SSH2-204ENST00000540801 RIPK4P57078 832 aa8.03□□□□□ -1.12
SSH2-204ENST00000540801 SLC26A8Q96RN1 970 aa8.03□□□□□ -1.12
SSH2-204ENST00000540801 USP6P35125 1406 aa8.03□□□□□ -1.12
SSH2-204ENST00000540801 PXDNQ92626 1479 aa8.03□□□□□ -1.12
SSH2-204ENST00000540801 EDC4Q6P2E9 1401 aaKnown RBP8.03□□□□□ -1.12
SSH2-204ENST00000540801 NSD2O96028 1365 aa8.03□□□□□ -1.12
SSH2-204ENST00000540801 PKP1Q13835 747 aa8.03□□□□□ -1.12
SSH2-204ENST00000540801 MCM10Q7L590 875 aa8.03□□□□□ -1.12
SSH2-204ENST00000540801 USP31Q70CQ4 1352 aa8.03□□□□□ -1.12
SSH2-204ENST00000540801 CAMTA1Q9Y6Y1 1673 aa8.03□□□□□ -1.12
SSH2-204ENST00000540801 ABCC4O15439 1325 aa8.03□□□□□ -1.12
SSH2-204ENST00000540801 NUDT16Q96DE0 195 aaKnown RBP8.02□□□□□ -1.12
SSH2-204ENST00000540801 PHRF1Q9P1Y6 1649 aaKnown RBP8.02□□□□□ -1.13
SSH2-204ENST00000540801 MSH6P52701 1360 aa8.02□□□□□ -1.13
SSH2-204ENST00000540801 LMO7Q8WWI1 1683 aa8.02□□□□□ -1.13
SSH2-204ENST00000540801 U2SURPO15042 1029 aaKnown RBP8.01□□□□□ -1.13
SSH2-204ENST00000540801 ATF7IPQ6VMQ6 1270 aa8.01□□□□□ -1.13
SSH2-204ENST00000540801 ACEP12821 1306 aa8.01□□□□□ -1.13
SSH2-204ENST00000540801 SALL3Q9BXA9 1300 aa8.01□□□□□ -1.13
SSH2-204ENST00000540801 AATKQ6ZMQ8 1374 aa8.01□□□□□ -1.13
SSH2-204ENST00000540801 CACNA1FO60840 1977 aa8.01□□□□□ -1.13
SSH2-204ENST00000540801 MYO5AQ9Y4I1 1855 aaKnown RBP8.01□□□□□ -1.13
SSH2-204ENST00000540801 KDRP35968 1356 aa8□□□□□ -1.13
SSH2-204ENST00000540801 TSHZ3Q63HK5 1081 aa7.99□□□□□ -1.13
SSH2-204ENST00000540801 PRAMEF22A3QJZ6 481 aa7.99□□□□□ -1.13
SSH2-204ENST00000540801 NEFMP07197 916 aa7.99□□□□□ -1.13
SSH2-204ENST00000540801 TRHP20396 242 aaPredicted RBP7.99□□□□□ -1.13
SSH2-204ENST00000540801 CDCA8Q53HL2 280 aa7.99□□□□□ -1.13
SSH2-204ENST00000540801 RTN4Q9NQC3 1192 aaKnown RBP7.99□□□□□ -1.13
SSH2-204ENST00000540801 BRPF1P55201 1214 aaPredicted RBP7.99□□□□□ -1.13
SSH2-204ENST00000540801 NUCB1Q02818 461 aa7.99□□□□□ -1.13
SSH2-204ENST00000540801 HDAC1Q13547 482 aaPredicted RBP7.99□□□□□ -1.13
SSH2-204ENST00000540801 GAS2L3Q86XJ1 694 aa7.99□□□□□ -1.13
SSH2-204ENST00000540801 PANK2Q9BZ23 570 aa7.99□□□□□ -1.13
SSH2-204ENST00000540801 ZBTB47Q9UFB7 747 aaPredicted RBP7.99□□□□□ -1.13
SSH2-204ENST00000540801 ZNF142P52746 1687 aaPredicted RBP7.99□□□□□ -1.13
SSH2-204ENST00000540801 ALS2Q96Q42 1657 aa7.99□□□□□ -1.13
SSH2-204ENST00000540801 SPRYD3Q8NCJ5 442 aa7.98□□□□□ -1.13
SSH2-204ENST00000540801 ANO8Q9HCE9 1232 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms