RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 FMN2Q9NZ56 1722 aa12.3□□□□□ -0.44
LCOR-209ENST00000540664 USP54Q70EL1 1684 aa12.29□□□□□ -0.44
LCOR-209ENST00000540664 HMOX1P09601 288 aa12.29□□□□□ -0.44
LCOR-209ENST00000540664 NEFMP07197 916 aa12.29□□□□□ -0.44
LCOR-209ENST00000540664 ANP32AP39687 249 aaKnown RBP12.29□□□□□ -0.44
LCOR-209ENST00000540664 ZKSCAN2Q63HK3 967 aa12.29□□□□□ -0.44
LCOR-209ENST00000540664 BCL2L13Q9BXK5 485 aa12.29□□□□□ -0.44
LCOR-209ENST00000540664 SSH1Q8WYL5 1049 aa12.28□□□□□ -0.44
LCOR-209ENST00000540664 CHD2O14647 1828 aaKnown RBP12.28□□□□□ -0.44
LCOR-209ENST00000540664 PIK3C2AO00443 1686 aa12.27□□□□□ -0.44
LCOR-209ENST00000540664 ZNF853P0CG23 659 aa12.27□□□□□ -0.44
LCOR-209ENST00000540664 BRPF1P55201 1214 aaPredicted RBP12.27□□□□□ -0.44
LCOR-209ENST00000540664 CALD1Q05682 793 aaKnown RBP12.27□□□□□ -0.44
LCOR-209ENST00000540664 ALDH1L2Q3SY69 923 aa12.27□□□□□ -0.44
LCOR-209ENST00000540664 ANKLE2Q86XL3 938 aa12.27□□□□□ -0.44
LCOR-209ENST00000540664 ZNF428Q96B54 188 aa12.27□□□□□ -0.44
LCOR-209ENST00000540664 IPO9Q96P70 1041 aaKnown RBP12.27□□□□□ -0.44
LCOR-209ENST00000540664 MVPQ14764 893 aaKnown RBP12.27□□□□□ -0.45
LCOR-209ENST00000540664 EIF4A2Q14240 407 aaKnown RBP12.26□□□□□ -0.45
LCOR-209ENST00000540664 DZIP1LQ8IYY4 767 aaKnown RBP12.26□□□□□ -0.45
LCOR-209ENST00000540664 PMFBP1Q8TBY8 1022 aa12.26□□□□□ -0.45
LCOR-209ENST00000540664 SMC4Q9NTJ3 1288 aa12.26□□□□□ -0.45
LCOR-209ENST00000540664 IFT57Q9NWB7 429 aa12.26□□□□□ -0.45
LCOR-209ENST00000540664 MARF1Q9Y4F3 1742 aaKnown RBP12.26□□□□□ -0.45
LCOR-209ENST00000540664 NUTM2FA1L443 756 aa12.26□□□□□ -0.45
LCOR-209ENST00000540664 KCNA6P17658 529 aa12.26□□□□□ -0.45
LCOR-209ENST00000540664 PCDHB15Q9Y5E8 787 aa12.26□□□□□ -0.45
LCOR-209ENST00000540664 TRIM27P14373 513 aa12.25□□□□□ -0.45
LCOR-209ENST00000540664 LMOD3Q0VAK6 560 aa12.25□□□□□ -0.45
LCOR-209ENST00000540664 ATF7IPQ6VMQ6 1270 aa12.25□□□□□ -0.45
LCOR-209ENST00000540664 KIF16BQ96L93 1317 aa12.24□□□□□ -0.45
LCOR-209ENST00000540664 GNAI1P63096 354 aa12.24□□□□□ -0.45
LCOR-209ENST00000540664 FAM161AQ3B820 660 aa12.24□□□□□ -0.45
LCOR-209ENST00000540664 C8orf34Q49A92 452 aa12.24□□□□□ -0.45
LCOR-209ENST00000540664 NOP58Q9Y2X3 529 aaKnown RBP12.24□□□□□ -0.45
LCOR-209ENST00000540664 VIRMAQ69YN4 1812 aaKnown RBP12.24□□□□□ -0.45
LCOR-209ENST00000540664 NOB1Q9ULX3 412 aaKnown RBP12.23□□□□□ -0.45
LCOR-209ENST00000540664 SBNO1A3KN83 1393 aa12.23□□□□□ -0.45
LCOR-209ENST00000540664 NPHP4O75161 1426 aaPredicted RBP12.22□□□□□ -0.45
LCOR-209ENST00000540664 FTSJ3Q8IY81 847 aaKnown RBP12.22□□□□□ -0.45
LCOR-209ENST00000540664 CFAP44Q96MT7 982 aa12.22□□□□□ -0.45
LCOR-209ENST00000540664 THUMPD2Q9BTF0 503 aaKnown RBP12.22□□□□□ -0.45
LCOR-209ENST00000540664 ARHGEF10O15013 1369 aa12.22□□□□□ -0.45
LCOR-209ENST00000540664 VAMP4O75379 141 aa12.22□□□□□ -0.45
LCOR-209ENST00000540664 HSP90AB2PQ58FF8 381 aa12.22□□□□□ -0.45
LCOR-209ENST00000540664 NGDNQ8NEJ9 315 aaKnown RBP12.22□□□□□ -0.45
LCOR-209ENST00000540664 FLT4P35916 1363 aa12.22□□□□□ -0.45
LCOR-209ENST00000540664 MAP3K19Q56UN5 1328 aa12.21□□□□□ -0.45
LCOR-209ENST00000540664 IPO8O15397 1037 aaKnown RBP12.21□□□□□ -0.45
LCOR-209ENST00000540664 AEBP1Q8IUX7 1158 aa12.21□□□□□ -0.45
LCOR-209ENST00000540664 MBIPQ9NS73 344 aa12.21□□□□□ -0.45
LCOR-209ENST00000540664 DDX19BQ9UMR2 479 aa12.21□□□□□ -0.45
LCOR-209ENST00000540664 KIF24Q5T7B8 1368 aa12.21□□□□□ -0.45
LCOR-209ENST00000540664 SULT6B1Q6IMI4 303 aa12.21□□□□□ -0.46
LCOR-209ENST00000540664 ERICH6Q7L0X2 663 aa12.21□□□□□ -0.46
LCOR-209ENST00000540664 ARHGAP45Q92619 1136 aa12.21□□□□□ -0.46
LCOR-209ENST00000540664 RWDD1Q9H446 243 aaPredicted RBP12.21□□□□□ -0.46
LCOR-209ENST00000540664 KDRP35968 1356 aa12.21□□□□□ -0.46
LCOR-209ENST00000540664 PAK3O75914 559 aaPredicted RBP12.2□□□□□ -0.46
LCOR-209ENST00000540664 RGS3P49796 1198 aa12.2□□□□□ -0.46
LCOR-209ENST00000540664 MRPL50Q8N5N7 158 aaKnown RBP12.19□□□□□ -0.46
LCOR-209ENST00000540664 HDAC1Q13547 482 aaPredicted RBP12.19□□□□□ -0.46
LCOR-209ENST00000540664 TMEM57Q8N5G2 664 aa12.19□□□□□ -0.46
LCOR-209ENST00000540664 TSPYL6Q8N831 410 aa12.19□□□□□ -0.46
LCOR-209ENST00000540664 ZBTB40Q9NUA8 1239 aa12.18□□□□□ -0.46
LCOR-209ENST00000540664 LAS1LQ9Y4W2 734 aaKnown RBP12.18□□□□□ -0.46
LCOR-209ENST00000540664 FAM83GA6ND36 823 aa12.18□□□□□ -0.46
LCOR-209ENST00000540664 ADGRL3Q9HAR2 1447 aa12.18□□□□□ -0.46
LCOR-209ENST00000540664 ZBTB47Q9UFB7 747 aaPredicted RBP12.18□□□□□ -0.46
LCOR-209ENST00000540664 IGSF1Q8N6C5 1336 aa12.18□□□□□ -0.46
LCOR-209ENST00000540664 NWD1Q149M9 1564 aa12.17□□□□□ -0.46
LCOR-209ENST00000540664 TWISTNBQ3B726 338 aaPredicted RBP12.17□□□□□ -0.46
LCOR-209ENST00000540664 NPM2Q86SE8 214 aaKnown RBP12.17□□□□□ -0.46
LCOR-209ENST00000540664 ITPRIPQ8IWB1 547 aa12.17□□□□□ -0.46
LCOR-209ENST00000540664 C8orf58Q8NAV2 365 aa12.17□□□□□ -0.46
LCOR-209ENST00000540664 PDZRN3Q9UPQ7 1066 aa12.17□□□□□ -0.46
LCOR-209ENST00000540664 CRB1P82279 1406 aa12.16□□□□□ -0.46
LCOR-209ENST00000540664 CHL1O00533 1208 aa12.16□□□□□ -0.46
LCOR-209ENST00000540664 KIAA0232Q92628 1395 aa12.16□□□□□ -0.46
LCOR-209ENST00000540664 DCTN1Q14203 1278 aa12.15□□□□□ -0.46
LCOR-209ENST00000540664 ABCC4O15439 1325 aa12.15□□□□□ -0.46
LCOR-209ENST00000540664 LRRC37A3O60309 1634 aa12.15□□□□□ -0.46
LCOR-209ENST00000540664 NLRP6P59044 892 aa12.15□□□□□ -0.46
LCOR-209ENST00000540664 PHF8Q9UPP1 1060 aa12.15□□□□□ -0.46
LCOR-209ENST00000540664 SMC5Q8IY18 1101 aa12.14□□□□□ -0.47
LCOR-209ENST00000540664 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
LCOR-209ENST00000540664 PHRF1Q9P1Y6 1649 aaKnown RBP12.14□□□□□ -0.47
LCOR-209ENST00000540664 RBM33Q96EV2 1170 aaKnown RBP12.14□□□□□ -0.47
LCOR-209ENST00000540664 DDRGK1Q96HY6 314 aa12.14□□□□□ -0.47
LCOR-209ENST00000540664 EYA1Q99502 592 aa12.14□□□□□ -0.47
LCOR-209ENST00000540664 NFAT5O94916 1531 aa12.14□□□□□ -0.47
LCOR-209ENST00000540664 ZBTB7BO15156 539 aaPredicted RBP12.13□□□□□ -0.47
LCOR-209ENST00000540664 SOX12O15370 315 aa12.13□□□□□ -0.47
LCOR-209ENST00000540664 HOXC9P31274 260 aa12.13□□□□□ -0.47
LCOR-209ENST00000540664 AMPHP49418 695 aa12.13□□□□□ -0.47
LCOR-209ENST00000540664 LTN1O94822 1766 aa12.13□□□□□ -0.47
LCOR-209ENST00000540664 MTHFSDQ2M296 383 aaKnown RBP12.13□□□□□ -0.47
LCOR-209ENST00000540664 HAP1P54257 671 aaPredicted RBP12.12□□□□□ -0.47
LCOR-209ENST00000540664 MCM10Q7L590 875 aa12.12□□□□□ -0.47
LCOR-209ENST00000540664 CHMP4BQ9H444 224 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms