RNA–Protein interactions for RNA: ENST00000540221.1

PXN-209, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-209ENST00000540221 GGNBP2Q9H3C7 697 aa12.46□□□□□ -0.41
PXN-209ENST00000540221 KNSTRNQ9Y448 316 aa12.46□□□□□ -0.41
PXN-209ENST00000540221 COL5A2P05997 1499 aaPredicted RBP12.46□□□□□ -0.42
PXN-209ENST00000540221 BLMP54132 1417 aaPredicted RBP12.45□□□□□ -0.42
PXN-209ENST00000540221 CCDC7Q96M83 1385 aa12.45□□□□□ -0.42
PXN-209ENST00000540221 LMO7Q8WWI1 1683 aa12.45□□□□□ -0.42
PXN-209ENST00000540221 CAMTA1Q9Y6Y1 1673 aa12.45□□□□□ -0.42
PXN-209ENST00000540221 WDR17Q8IZU2 1322 aa12.45□□□□□ -0.42
PXN-209ENST00000540221 BARGINQ6ZT62 677 aa12.45□□□□□ -0.42
PXN-209ENST00000540221 CRB1P82279 1406 aa12.45□□□□□ -0.42
PXN-209ENST00000540221 RTL1A6NKG5 1358 aa12.44□□□□□ -0.42
PXN-209ENST00000540221 LARP1Q6PKG0 1096 aaKnown RBP12.44□□□□□ -0.42
PXN-209ENST00000540221 SEPT12Q8IYM1 358 aa12.44□□□□□ -0.42
PXN-209ENST00000540221 TCP11L2Q8N4U5 519 aa12.44□□□□□ -0.42
PXN-209ENST00000540221 IP6K1Q92551 441 aa12.44□□□□□ -0.42
PXN-209ENST00000540221 CDCA7Q9BWT1 371 aaPredicted RBP12.44□□□□□ -0.42
PXN-209ENST00000540221 NRAPQ86VF7 1730 aa12.44□□□□□ -0.42
PXN-209ENST00000540221 GLI3P10071 1580 aa12.43□□□□□ -0.42
PXN-209ENST00000540221 CSB-PGBD3P0DP91 1061 aa12.43□□□□□ -0.42
PXN-209ENST00000540221 AMPHP49418 695 aa12.43□□□□□ -0.42
PXN-209ENST00000540221 FAM98CQ17RN3 349 aaKnown RBP12.43□□□□□ -0.42
PXN-209ENST00000540221 TOM1L2Q6ZVM7 507 aa12.43□□□□□ -0.42
PXN-209ENST00000540221 CARD10Q9BWT7 1032 aa12.43□□□□□ -0.42
PXN-209ENST00000540221 AXIN2Q9Y2T1 843 aa12.43□□□□□ -0.42
PXN-209ENST00000540221 ERBB3P21860 1342 aa12.42□□□□□ -0.42
PXN-209ENST00000540221 MAP3K19Q56UN5 1328 aa12.42□□□□□ -0.42
PXN-209ENST00000540221 WASHC2AQ641Q2 1341 aa12.42□□□□□ -0.42
PXN-209ENST00000540221 A0A0G2JS52 829 aa12.42□□□□□ -0.42
PXN-209ENST00000540221 MYT1Q01538 1121 aa12.42□□□□□ -0.42
PXN-209ENST00000540221 HOXC9P31274 260 aa12.4□□□□□ -0.42
PXN-209ENST00000540221 KRT27Q7Z3Y8 459 aa12.4□□□□□ -0.42
PXN-209ENST00000540221 CCDC125Q86Z20 511 aa12.4□□□□□ -0.42
PXN-209ENST00000540221 ANKRD24Q8TF21 1146 aa12.4□□□□□ -0.42
PXN-209ENST00000540221 USP35Q9P2H5 1018 aa12.4□□□□□ -0.42
PXN-209ENST00000540221 FLT4P35916 1363 aa12.4□□□□□ -0.42
PXN-209ENST00000540221 SMG6Q86US8 1419 aaKnown RBP12.39□□□□□ -0.43
PXN-209ENST00000540221 COL18A1P39060 1754 aa12.39□□□□□ -0.43
PXN-209ENST00000540221 PER1O15534 1290 aaPredicted RBP12.39□□□□□ -0.43
PXN-209ENST00000540221 MORC1Q86VD1 984 aa12.39□□□□□ -0.43
PXN-209ENST00000540221 NPC1L1Q9UHC9 1359 aa12.39□□□□□ -0.43
PXN-209ENST00000540221 PDE3BQ13370 1112 aa12.38□□□□□ -0.43
PXN-209ENST00000540221 RRS1Q15050 365 aaKnown RBP12.38□□□□□ -0.43
PXN-209ENST00000540221 AMER1Q5JTC6 1135 aaPredicted RBP12.38□□□□□ -0.43
PXN-209ENST00000540221 NLRP2Q9NX02 1062 aa12.38□□□□□ -0.43
PXN-209ENST00000540221 INSRP06213 1382 aa12.38□□□□□ -0.43
PXN-209ENST00000540221 KIF20BQ96Q89 1820 aa12.37□□□□□ -0.43
PXN-209ENST00000540221 DDB1Q16531 1140 aa12.36□□□□□ -0.43
PXN-209ENST00000540221 UPF1Q92900 1129 aaKnown RBP eCLIP12.36□□□□□ -0.43
PXN-209ENST00000540221 EXOC5O00471 708 aa12.35□□□□□ -0.43
PXN-209ENST00000540221 FAM196AQ6ZSG2 479 aa12.35□□□□□ -0.43
PXN-209ENST00000540221 POLKQ9UBT6 870 aa12.35□□□□□ -0.43
PXN-209ENST00000540221 THSD7AQ9UPZ6 1657 aa12.35□□□□□ -0.43
PXN-209ENST00000540221 IL2RBP14784 551 aa12.34□□□□□ -0.43
PXN-209ENST00000540221 FBLN1P23142 703 aa12.34□□□□□ -0.43
PXN-209ENST00000540221 EMILIN1Q9Y6C2 1016 aa12.34□□□□□ -0.43
PXN-209ENST00000540221 LTN1O94822 1766 aa12.33□□□□□ -0.44
PXN-209ENST00000540221 PPM1GO15355 546 aaPredicted RBP12.33□□□□□ -0.44
PXN-209ENST00000540221 TNNT2P45379 298 aaPredicted RBP12.33□□□□□ -0.44
PXN-209ENST00000540221 SF3B2Q13435 895 aaKnown RBP12.33□□□□□ -0.44
PXN-209ENST00000540221 HSP90AB2PQ58FF8 381 aa12.33□□□□□ -0.44
PXN-209ENST00000540221 LTV1Q96GA3 475 aaPredicted RBP12.33□□□□□ -0.44
PXN-209ENST00000540221 FAM208AQ9UK61 1670 aaKnown RBP12.32□□□□□ -0.44
PXN-209ENST00000540221 DISP2A7MBM2 1401 aa12.32□□□□□ -0.44
PXN-209ENST00000540221 ANKRD26Q9UPS8 1709 aa12.31□□□□□ -0.44
PXN-209ENST00000540221 PLEKHG2Q9H7P9 1386 aa12.3□□□□□ -0.44
PXN-209ENST00000540221 OVOS2A0A0G2JMS6 1433 aa12.3□□□□□ -0.44
PXN-209ENST00000540221 CC2D1BQ5T0F9 858 aaKnown RBP12.3□□□□□ -0.44
PXN-209ENST00000540221 RAPGEF4Q8WZA2 1011 aa12.3□□□□□ -0.44
PXN-209ENST00000540221 BCL9O00512 1426 aa12.29□□□□□ -0.44
PXN-209ENST00000540221 PARP4Q9UKK3 1724 aaKnown RBP12.29□□□□□ -0.44
PXN-209ENST00000540221 NBPF6Q5VWK0 638 aa12.29□□□□□ -0.44
PXN-209ENST00000540221 NBPF4Q96M43 638 aa12.29□□□□□ -0.44
PXN-209ENST00000540221 TNS2Q63HR2 1409 aa12.28□□□□□ -0.44
PXN-209ENST00000540221 TATP17735 454 aaPredicted RBP12.28□□□□□ -0.44
PXN-209ENST00000540221 BAG6P46379 1132 aa12.27□□□□□ -0.45
PXN-209ENST00000540221 MTHFSP49914 203 aa12.27□□□□□ -0.45
PXN-209ENST00000540221 EIF4A2Q14240 407 aaKnown RBP12.27□□□□□ -0.45
PXN-209ENST00000540221 RGPD5Q99666 1765 aa12.27□□□□□ -0.45
PXN-209ENST00000540221 NCAPD2Q15021 1401 aa12.27□□□□□ -0.45
PXN-209ENST00000540221 PEAK1Q9H792 1746 aa12.26□□□□□ -0.45
PXN-209ENST00000540221 MARCH10Q8NA82 808 aaPredicted RBP12.26□□□□□ -0.45
PXN-209ENST00000540221 ZCRB1Q8TBF4 217 aaKnown RBP12.26□□□□□ -0.45
PXN-209ENST00000540221 EYA1Q99502 592 aa12.26□□□□□ -0.45
PXN-209ENST00000540221 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.26□□□□□ -0.45
PXN-209ENST00000540221 EP400Q96L91 3159 aa12.25□□□□□ -0.45
PXN-209ENST00000540221 CFAP53Q96M91 514 aa12.25□□□□□ -0.45
PXN-209ENST00000540221 IGSF1Q8N6C5 1336 aa12.25□□□□□ -0.45
PXN-209ENST00000540221 LRRC37A3O60309 1634 aa12.25□□□□□ -0.45
PXN-209ENST00000540221 BRWD3Q6RI45 1802 aa12.25□□□□□ -0.45
PXN-209ENST00000540221 FAM182BQ5T319 152 aa12.24□□□□□ -0.45
PXN-209ENST00000540221 PARD3Q8TEW0 1356 aa12.24□□□□□ -0.45
PXN-209ENST00000540221 BCL11BQ9C0K0 894 aaPredicted RBP12.24□□□□□ -0.45
PXN-209ENST00000540221 SPG7Q9UQ90 795 aa12.24□□□□□ -0.45
PXN-209ENST00000540221 PCDH11XQ9BZA7 1347 aa12.23□□□□□ -0.45
PXN-209ENST00000540221 PCDH11YQ9BZA8 1340 aa12.23□□□□□ -0.45
PXN-209ENST00000540221 DIAPH1O60610 1272 aaKnown RBP12.23□□□□□ -0.45
PXN-209ENST00000540221 TRIM37O94972 964 aa12.23□□□□□ -0.45
PXN-209ENST00000540221 IL13P35225 146 aa12.23□□□□□ -0.45
PXN-209ENST00000540221 DDX10Q13206 875 aaKnown RBP12.23□□□□□ -0.45
PXN-209ENST00000540221 USHBP1Q8N6Y0 703 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms