RNA–Protein interactions for RNA: ENST00000539890.1

CYB561A3-213, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4 BASIC

Gene CYB561A3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-213ENST00000539890 OVOS2Q6IE36 1432 aa17.13■□□□□ 0.33
CYB561A3-213ENST00000539890 PPM1GO15355 546 aaPredicted RBP17.12■□□□□ 0.33
CYB561A3-213ENST00000539890 TCP11L2Q8N4U5 519 aa17.12■□□□□ 0.33
CYB561A3-213ENST00000539890 SPATA31A1Q5TZJ5 1347 aa17.12■□□□□ 0.33
CYB561A3-213ENST00000539890 CCDC7Q96M83 1385 aa17.12■□□□□ 0.33
CYB561A3-213ENST00000539890 TNNT2P45379 298 aaPredicted RBP17.11■□□□□ 0.33
CYB561A3-213ENST00000539890 RRS1Q15050 365 aaKnown RBP17.11■□□□□ 0.33
CYB561A3-213ENST00000539890 MORC1Q86VD1 984 aa17.11■□□□□ 0.33
CYB561A3-213ENST00000539890 IP6K1Q92551 441 aa17.11■□□□□ 0.33
CYB561A3-213ENST00000539890 LTV1Q96GA3 475 aaPredicted RBP17.11■□□□□ 0.33
CYB561A3-213ENST00000539890 NLRP2Q9NX02 1062 aa17.11■□□□□ 0.33
CYB561A3-213ENST00000539890 THRAP3Q9Y2W1 955 aaKnown RBP17.11■□□□□ 0.33
CYB561A3-213ENST00000539890 WASHC2AQ641Q2 1341 aa17.11■□□□□ 0.33
CYB561A3-213ENST00000539890 CAMTA1Q9Y6Y1 1673 aa17.1■□□□□ 0.33
CYB561A3-213ENST00000539890 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.1■□□□□ 0.33
CYB561A3-213ENST00000539890 FBLN1P23142 703 aa17.1■□□□□ 0.33
CYB561A3-213ENST00000539890 WDR17Q8IZU2 1322 aa17.1■□□□□ 0.33
CYB561A3-213ENST00000539890 RGS12O14924 1447 aa17.1■□□□□ 0.33
CYB561A3-213ENST00000539890 ONECUT3O60422 494 aaPredicted RBP17.09■□□□□ 0.33
CYB561A3-213ENST00000539890 CNGB1Q14028 1251 aaPredicted RBP17.09■□□□□ 0.33
CYB561A3-213ENST00000539890 ANKRD24Q8TF21 1146 aa17.09■□□□□ 0.33
CYB561A3-213ENST00000539890 MAP3K19Q56UN5 1328 aa17.09■□□□□ 0.33
CYB561A3-213ENST00000539890 MYOM1P52179 1685 aa17.09■□□□□ 0.33
CYB561A3-213ENST00000539890 COL5A2P05997 1499 aaPredicted RBP17.08■□□□□ 0.32
CYB561A3-213ENST00000539890 CRB1P82279 1406 aa17.08■□□□□ 0.32
CYB561A3-213ENST00000539890 PDE3BQ13370 1112 aa17.08■□□□□ 0.32
CYB561A3-213ENST00000539890 KRT27Q7Z3Y8 459 aa17.08■□□□□ 0.32
CYB561A3-213ENST00000539890 NFAT5O94916 1531 aa17.07■□□□□ 0.32
CYB561A3-213ENST00000539890 NSD2O96028 1365 aa17.07■□□□□ 0.32
CYB561A3-213ENST00000539890 HOXC9P31274 260 aa17.07■□□□□ 0.32
CYB561A3-213ENST00000539890 BARGINQ6ZT62 677 aa17.07■□□□□ 0.32
CYB561A3-213ENST00000539890 CARD10Q9BWT7 1032 aa17.07■□□□□ 0.32
CYB561A3-213ENST00000539890 CDCA7Q9BWT1 371 aaPredicted RBP17.06■□□□□ 0.32
CYB561A3-213ENST00000539890 CC2D1BQ5T0F9 858 aaKnown RBP17.05■□□□□ 0.32
CYB561A3-213ENST00000539890 BLMP54132 1417 aaPredicted RBP17.04■□□□□ 0.32
CYB561A3-213ENST00000539890 ERBB3P21860 1342 aa17.04■□□□□ 0.32
CYB561A3-213ENST00000539890 GLI3P10071 1580 aa17.04■□□□□ 0.32
CYB561A3-213ENST00000539890 NRAPQ86VF7 1730 aa17.04■□□□□ 0.32
CYB561A3-213ENST00000539890 SMG6Q86US8 1419 aaKnown RBP17.04■□□□□ 0.32
CYB561A3-213ENST00000539890 SF3B2Q13435 895 aaKnown RBP17.03■□□□□ 0.32
CYB561A3-213ENST00000539890 EMILIN1Q9Y6C2 1016 aa17.03■□□□□ 0.32
CYB561A3-213ENST00000539890 USP54Q70EL1 1684 aa17.03■□□□□ 0.32
CYB561A3-213ENST00000539890 LMO7Q8WWI1 1683 aa17.03■□□□□ 0.32
CYB561A3-213ENST00000539890 KIF20BQ96Q89 1820 aa17.03■□□□□ 0.32
CYB561A3-213ENST00000539890 RTL1A6NKG5 1358 aa17.02■□□□□ 0.32
CYB561A3-213ENST00000539890 DDB1Q16531 1140 aa17.02■□□□□ 0.32
CYB561A3-213ENST00000539890 FLT4P35916 1363 aa17.02■□□□□ 0.31
CYB561A3-213ENST00000539890 ABCC6O95255 1503 aa17.01■□□□□ 0.31
CYB561A3-213ENST00000539890 EXOC5O00471 708 aa17.01■□□□□ 0.31
CYB561A3-213ENST00000539890 HSP90AB2PQ58FF8 381 aa17.01■□□□□ 0.31
CYB561A3-213ENST00000539890 KIF24Q5T7B8 1368 aa17.01■□□□□ 0.31
CYB561A3-213ENST00000539890 PER1O15534 1290 aaPredicted RBP17■□□□□ 0.31
CYB561A3-213ENST00000539890 AMER1Q5JTC6 1135 aaPredicted RBP17■□□□□ 0.31
CYB561A3-213ENST00000539890 UPF1Q92900 1129 aaKnown RBP eCLIP17■□□□□ 0.31
CYB561A3-213ENST00000539890 POLKQ9UBT6 870 aa17■□□□□ 0.31
CYB561A3-213ENST00000539890 IL2RBP14784 551 aa16.99■□□□□ 0.31
CYB561A3-213ENST00000539890 CCDC125Q86Z20 511 aa16.99■□□□□ 0.31
CYB561A3-213ENST00000539890 LTN1O94822 1766 aa16.99■□□□□ 0.31
CYB561A3-213ENST00000539890 COL18A1P39060 1754 aa16.98■□□□□ 0.31
CYB561A3-213ENST00000539890 FAM196AQ6ZSG2 479 aa16.98■□□□□ 0.31
CYB561A3-213ENST00000539890 INSRP06213 1382 aa16.98■□□□□ 0.31
CYB561A3-213ENST00000539890 FAM182BQ5T319 152 aa16.96■□□□□ 0.31
CYB561A3-213ENST00000539890 RAPGEF4Q8WZA2 1011 aa16.96■□□□□ 0.31
CYB561A3-213ENST00000539890 DDX10Q13206 875 aaKnown RBP16.95■□□□□ 0.3
CYB561A3-213ENST00000539890 RGPD5Q99666 1765 aa16.94■□□□□ 0.3
CYB561A3-213ENST00000539890 NBPF6Q5VWK0 638 aa16.94■□□□□ 0.3
CYB561A3-213ENST00000539890 NBPF4Q96M43 638 aa16.94■□□□□ 0.3
CYB561A3-213ENST00000539890 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
CYB561A3-213ENST00000539890 USHBP1Q8N6Y0 703 aa16.93■□□□□ 0.3
CYB561A3-213ENST00000539890 NPC1L1Q9UHC9 1359 aa16.92■□□□□ 0.3
CYB561A3-213ENST00000539890 MTHFSP49914 203 aa16.92■□□□□ 0.3
CYB561A3-213ENST00000539890 DDX54Q8TDD1 881 aaKnown RBP16.92■□□□□ 0.3
CYB561A3-213ENST00000539890 EIF4A2Q14240 407 aaKnown RBP16.9■□□□□ 0.3
CYB561A3-213ENST00000539890 ZCRB1Q8TBF4 217 aaKnown RBP16.9■□□□□ 0.3
CYB561A3-213ENST00000539890 CFAP53Q96M91 514 aa16.9■□□□□ 0.3
CYB561A3-213ENST00000539890 THSD7AQ9UPZ6 1657 aa16.89■□□□□ 0.29
CYB561A3-213ENST00000539890 TRIM37O94972 964 aa16.89■□□□□ 0.29
CYB561A3-213ENST00000539890 BAG6P46379 1132 aa16.89■□□□□ 0.29
CYB561A3-213ENST00000539890 ANKRD26Q9UPS8 1709 aa16.89■□□□□ 0.29
CYB561A3-213ENST00000539890 ZNF316A6NFI3 1004 aaPredicted RBP16.88■□□□□ 0.29
CYB561A3-213ENST00000539890 EYA1Q99502 592 aa16.88■□□□□ 0.29
CYB561A3-213ENST00000539890 MAP2P11137 1827 aaKnown RBP16.88■□□□□ 0.29
CYB561A3-213ENST00000539890 BRWD3Q6RI45 1802 aa16.87■□□□□ 0.29
CYB561A3-213ENST00000539890 MARCH10Q8NA82 808 aaPredicted RBP16.87■□□□□ 0.29
CYB561A3-213ENST00000539890 OVOS2A0A0G2JMS6 1433 aa16.87■□□□□ 0.29
CYB561A3-213ENST00000539890 DIAPH1O60610 1272 aaKnown RBP16.86■□□□□ 0.29
CYB561A3-213ENST00000539890 APBA3O96018 575 aa16.86■□□□□ 0.29
CYB561A3-213ENST00000539890 SPG7Q9UQ90 795 aa16.86■□□□□ 0.29
CYB561A3-213ENST00000539890 DISP2A7MBM2 1401 aa16.86■□□□□ 0.29
CYB561A3-213ENST00000539890 FAM208AQ9UK61 1670 aaKnown RBP16.85■□□□□ 0.29
CYB561A3-213ENST00000539890 PEAK1Q9H792 1746 aa16.84■□□□□ 0.29
CYB561A3-213ENST00000539890 NUDCQ9Y266 331 aa16.84■□□□□ 0.29
CYB561A3-213ENST00000539890 U2SURPO15042 1029 aaKnown RBP16.83■□□□□ 0.28
CYB561A3-213ENST00000539890 TNS2Q63HR2 1409 aa16.83■□□□□ 0.28
CYB561A3-213ENST00000539890 PARP4Q9UKK3 1724 aaKnown RBP16.83■□□□□ 0.28
CYB561A3-213ENST00000539890 PPP2R1AP30153 589 aa16.82■□□□□ 0.28
CYB561A3-213ENST00000539890 IL13P35225 146 aa16.82■□□□□ 0.28
CYB561A3-213ENST00000539890 RALBP1Q15311 655 aa16.82■□□□□ 0.28
CYB561A3-213ENST00000539890 SULT6B1Q6IMI4 303 aa16.82■□□□□ 0.28
CYB561A3-213ENST00000539890 DEFB132Q7Z7B7 95 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms