RNA–Protein interactions for RNA: ENST00000539479.5

MDM2-225, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-225ENST00000539479 ILDR1Q86SU0 546 aaPredicted RBP8.62□□□□□ -1.03
MDM2-225ENST00000539479 RBM33Q96EV2 1170 aaKnown RBP8.62□□□□□ -1.03
MDM2-225ENST00000539479 ATAD2Q6PL18 1390 aa8.61□□□□□ -1.03
MDM2-225ENST00000539479 CDC42BPGQ6DT37 1551 aa8.61□□□□□ -1.03
MDM2-225ENST00000539479 FMN2Q9NZ56 1722 aa8.61□□□□□ -1.03
MDM2-225ENST00000539479 HOXB3P14651 431 aaPredicted RBP8.61□□□□□ -1.03
MDM2-225ENST00000539479 CNGB1Q14028 1251 aaPredicted RBP8.61□□□□□ -1.03
MDM2-225ENST00000539479 NRKQ7Z2Y5 1582 aa8.61□□□□□ -1.03
MDM2-225ENST00000539479 SRPK2P78362 688 aaKnown RBP8.6□□□□□ -1.03
MDM2-225ENST00000539479 CC2D1BQ5T0F9 858 aaKnown RBP8.6□□□□□ -1.03
MDM2-225ENST00000539479 CABP1Q9NZU7 370 aa8.6□□□□□ -1.03
MDM2-225ENST00000539479 RGPD8O14715 1765 aaPredicted RBP8.6□□□□□ -1.03
MDM2-225ENST00000539479 AKAP12Q02952 1782 aa8.6□□□□□ -1.03
MDM2-225ENST00000539479 MON2Q7Z3U7 1717 aa8.6□□□□□ -1.03
MDM2-225ENST00000539479 XIRP1Q702N8 1843 aaKnown RBP8.59□□□□□ -1.03
MDM2-225ENST00000539479 SLC24A1O60721 1099 aa8.59□□□□□ -1.03
MDM2-225ENST00000539479 NUDT16Q96DE0 195 aaKnown RBP8.59□□□□□ -1.03
MDM2-225ENST00000539479 PPIP5K1Q6PFW1 1433 aa8.59□□□□□ -1.03
MDM2-225ENST00000539479 SSH2Q76I76 1423 aa8.59□□□□□ -1.03
MDM2-225ENST00000539479 ADGRL3Q9HAR2 1447 aa8.59□□□□□ -1.03
MDM2-225ENST00000539479 KTN1Q86UP2 1357 aaKnown RBP8.59□□□□□ -1.03
MDM2-225ENST00000539479 NINLQ9Y2I6 1382 aa8.59□□□□□ -1.03
MDM2-225ENST00000539479 TMC1Q8TDI8 760 aa8.58□□□□□ -1.04
MDM2-225ENST00000539479 MYBBP1AQ9BQG0 1328 aaKnown RBP8.57□□□□□ -1.04
MDM2-225ENST00000539479 PPP2R1AP30153 589 aa8.57□□□□□ -1.04
MDM2-225ENST00000539479 RALBP1Q15311 655 aa8.57□□□□□ -1.04
MDM2-225ENST00000539479 ANKRD26Q9UPS8 1709 aa8.57□□□□□ -1.04
MDM2-225ENST00000539479 PLEKHG3A1L390 1219 aa8.56□□□□□ -1.04
MDM2-225ENST00000539479 NUTM2FA1L443 756 aa8.56□□□□□ -1.04
MDM2-225ENST00000539479 FYB1O15117 783 aa8.56□□□□□ -1.04
MDM2-225ENST00000539479 VARS2Q5ST30 1063 aaKnown RBP8.56□□□□□ -1.04
MDM2-225ENST00000539479 PNISRQ8TF01 805 aaKnown RBP8.56□□□□□ -1.04
MDM2-225ENST00000539479 YTHDC1Q96MU7 727 aaKnown RBP8.56□□□□□ -1.04
MDM2-225ENST00000539479 CIZ1Q9ULV3 898 aaPredicted RBP8.56□□□□□ -1.04
MDM2-225ENST00000539479 KNSTRNQ9Y448 316 aa8.56□□□□□ -1.04
MDM2-225ENST00000539479 MARF1Q9Y4F3 1742 aaKnown RBP8.56□□□□□ -1.04
MDM2-225ENST00000539479 BRD4O60885 1362 aaPredicted RBP8.56□□□□□ -1.04
MDM2-225ENST00000539479 ANKARQ7Z5J8 1434 aa8.55□□□□□ -1.04
MDM2-225ENST00000539479 KIF20BQ96Q89 1820 aa8.55□□□□□ -1.04
MDM2-225ENST00000539479 MRS2Q9HD23 443 aa8.55□□□□□ -1.04
MDM2-225ENST00000539479 POLR3AO14802 1390 aaPredicted RBP8.55□□□□□ -1.04
MDM2-225ENST00000539479 SHPRHQ149N8 1683 aa8.55□□□□□ -1.04
MDM2-225ENST00000539479 ZNF335Q9H4Z2 1342 aaPredicted RBP8.54□□□□□ -1.04
MDM2-225ENST00000539479 USP6P35125 1406 aa8.54□□□□□ -1.04
MDM2-225ENST00000539479 EDC4Q6P2E9 1401 aaKnown RBP8.54□□□□□ -1.04
MDM2-225ENST00000539479 COL3A1P02461 1466 aaPredicted RBP8.54□□□□□ -1.04
MDM2-225ENST00000539479 TMEM94Q12767 1356 aa8.54□□□□□ -1.04
MDM2-225ENST00000539479 ITSN1Q15811 1721 aa8.54□□□□□ -1.04
MDM2-225ENST00000539479 LRRC7Q96NW7 1537 aa8.54□□□□□ -1.04
MDM2-225ENST00000539479 ACEP12821 1306 aa8.54□□□□□ -1.04
MDM2-225ENST00000539479 FBLN1P23142 703 aa8.53□□□□□ -1.04
MDM2-225ENST00000539479 NLRP13Q86W25 1043 aa8.53□□□□□ -1.04
MDM2-225ENST00000539479 NME9Q86XW9 330 aa8.53□□□□□ -1.04
MDM2-225ENST00000539479 GGNBP2Q9H3C7 697 aa8.53□□□□□ -1.04
MDM2-225ENST00000539479 OVOS2A0A0J9YW53 1432 aa8.53□□□□□ -1.04
MDM2-225ENST00000539479 MST1RQ04912 1400 aa8.53□□□□□ -1.04
MDM2-225ENST00000539479 OVOS2Q6IE36 1432 aa8.53□□□□□ -1.04
MDM2-225ENST00000539479 PIK3C2AO00443 1686 aa8.53□□□□□ -1.04
MDM2-225ENST00000539479 PTGER2P43116 358 aa8.52□□□□□ -1.05
MDM2-225ENST00000539479 CGNL1Q0VF96 1302 aa8.52□□□□□ -1.05
MDM2-225ENST00000539479 C1orf167Q5SNV9 1468 aa8.51□□□□□ -1.05
MDM2-225ENST00000539479 NSD2O96028 1365 aa8.51□□□□□ -1.05
MDM2-225ENST00000539479 USP54Q70EL1 1684 aa8.51□□□□□ -1.05
MDM2-225ENST00000539479 PROSER2Q86WR7 435 aaPredicted RBP8.51□□□□□ -1.05
MDM2-225ENST00000539479 PMFBP1Q8TBY8 1022 aa8.51□□□□□ -1.05
MDM2-225ENST00000539479 SPOCK2Q92563 424 aa8.51□□□□□ -1.05
MDM2-225ENST00000539479 ZSWIM6Q9HCJ5 1215 aa8.51□□□□□ -1.05
MDM2-225ENST00000539479 TERF2IPQ9NYB0 399 aa8.51□□□□□ -1.05
MDM2-225ENST00000539479 BLMP54132 1417 aaPredicted RBP8.51□□□□□ -1.05
MDM2-225ENST00000539479 TTC21BQ7Z4L5 1316 aa8.51□□□□□ -1.05
MDM2-225ENST00000539479 HDGFL2Q7Z4V5 671 aaPredicted RBP8.5□□□□□ -1.05
MDM2-225ENST00000539479 SMG6Q86US8 1419 aaKnown RBP8.5□□□□□ -1.05
MDM2-225ENST00000539479 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.5□□□□□ -1.05
MDM2-225ENST00000539479 ORAI2Q96SN7 254 aa8.5□□□□□ -1.05
MDM2-225ENST00000539479 PEAK1Q9H792 1746 aa8.5□□□□□ -1.05
MDM2-225ENST00000539479 TRPM3Q9HCF6 1732 aaPredicted RBP8.5□□□□□ -1.05
MDM2-225ENST00000539479 NCOA3Q9Y6Q9 1424 aa8.5□□□□□ -1.05
MDM2-225ENST00000539479 LTBP4Q8N2S1 1624 aa8.5□□□□□ -1.05
MDM2-225ENST00000539479 DCCP43146 1447 aa8.49□□□□□ -1.05
MDM2-225ENST00000539479 SENP3-EIF4A1A0A087X0R7 540 aa8.49□□□□□ -1.05
MDM2-225ENST00000539479 TNNT2P45379 298 aaPredicted RBP8.49□□□□□ -1.05
MDM2-225ENST00000539479 MORC1Q86VD1 984 aa8.49□□□□□ -1.05
MDM2-225ENST00000539479 FAM9BQ8IZU0 186 aa8.49□□□□□ -1.05
MDM2-225ENST00000539479 ZNF687Q8N1G0 1237 aa8.49□□□□□ -1.05
MDM2-225ENST00000539479 USP31Q70CQ4 1352 aa8.48□□□□□ -1.05
MDM2-225ENST00000539479 PNPLA6Q8IY17 1366 aa8.48□□□□□ -1.05
MDM2-225ENST00000539479 INSRP06213 1382 aa8.48□□□□□ -1.05
MDM2-225ENST00000539479 MTHFSP49914 203 aa8.47□□□□□ -1.05
MDM2-225ENST00000539479 C19orf44Q9H6X5 657 aa8.47□□□□□ -1.05
MDM2-225ENST00000539479 POLKQ9UBT6 870 aa8.47□□□□□ -1.05
MDM2-225ENST00000539479 ADAMTS8Q9UP79 889 aa8.47□□□□□ -1.05
MDM2-225ENST00000539479 PHF8Q9UPP1 1060 aa8.47□□□□□ -1.05
MDM2-225ENST00000539479 EFCAB3Q8N7B9 438 aa8.46□□□□□ -1.06
MDM2-225ENST00000539479 DDX17Q92841 729 aaKnown RBP8.46□□□□□ -1.06
MDM2-225ENST00000539479 EMILIN1Q9Y6C2 1016 aa8.46□□□□□ -1.06
MDM2-225ENST00000539479 ALS2Q96Q42 1657 aa8.46□□□□□ -1.06
MDM2-225ENST00000539479 AATKQ6ZMQ8 1374 aa8.46□□□□□ -1.06
MDM2-225ENST00000539479 IQSEC2Q5JU85 1478 aa8.45□□□□□ -1.06
MDM2-225ENST00000539479 PXDNQ92626 1479 aa8.45□□□□□ -1.06
MDM2-225ENST00000539479 NFAT5O94916 1531 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms