RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 TRAF7Q6Q0C0 670 aa5.7□□□□□ -1.5
SNHG1-210ENST00000539303 DZIP3Q86Y13 1208 aaKnown RBP5.7□□□□□ -1.5
SNHG1-210ENST00000539303 PLEKHM2Q8IWE5 1019 aa5.7□□□□□ -1.5
SNHG1-210ENST00000539303 NFATC2IPQ8NCF5 419 aa5.7□□□□□ -1.5
SNHG1-210ENST00000539303 MKRN1Q9UHC7 482 aaKnown RBP5.7□□□□□ -1.5
SNHG1-210ENST00000539303 SKOR1P84550 965 aa5.69□□□□□ -1.5
SNHG1-210ENST00000539303 TMEM164Q5U3C3 297 aa5.69□□□□□ -1.5
SNHG1-210ENST00000539303 CDCA7Q9BWT1 371 aaPredicted RBP5.69□□□□□ -1.5
SNHG1-210ENST00000539303 CHIC2Q9UKJ5 165 aa5.69□□□□□ -1.5
SNHG1-210ENST00000539303 NOVA2Q9UNW9 492 aaKnown RBP5.69□□□□□ -1.5
SNHG1-210ENST00000539303 USTQ9Y2C2 406 aa5.69□□□□□ -1.5
SNHG1-210ENST00000539303 USP17L15C9J2P7 530 aa5.68□□□□□ -1.5
SNHG1-210ENST00000539303 USP17L10C9JJH3 530 aa5.68□□□□□ -1.5
SNHG1-210ENST00000539303 USP17L13C9JLJ4 530 aa5.68□□□□□ -1.5
SNHG1-210ENST00000539303 USP17L12C9JPN9 530 aa5.68□□□□□ -1.5
SNHG1-210ENST00000539303 USP17L11C9JVI0 530 aa5.68□□□□□ -1.5
SNHG1-210ENST00000539303 USP17L21D6R901 530 aa5.68□□□□□ -1.5
SNHG1-210ENST00000539303 USP17L18D6R9N7 530 aa5.68□□□□□ -1.5
SNHG1-210ENST00000539303 USP17L22D6RA61 530 aa5.68□□□□□ -1.5
SNHG1-210ENST00000539303 USP17L17D6RBQ6 530 aa5.68□□□□□ -1.5
SNHG1-210ENST00000539303 USP17L19D6RCP7 530 aa5.68□□□□□ -1.5
SNHG1-210ENST00000539303 USP17L20D6RJB6 530 aa5.68□□□□□ -1.5
SNHG1-210ENST00000539303 ITGBL1O95965 494 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-210ENST00000539303 KCNC4Q03721 635 aa5.68□□□□□ -1.5
SNHG1-210ENST00000539303 USP17L24Q0WX57 530 aa5.68□□□□□ -1.5
SNHG1-210ENST00000539303 BPHLQ86WA6 291 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-210ENST00000539303 KCTD17Q8N5Z5 321 aa5.68□□□□□ -1.5
SNHG1-210ENST00000539303 C1QTNF2Q9BXJ5 285 aa5.68□□□□□ -1.5
SNHG1-210ENST00000539303 SLAIN2Q9P270 581 aa5.68□□□□□ -1.5
SNHG1-210ENST00000539303 KIAA1024Q9UPX6 916 aa5.68□□□□□ -1.5
SNHG1-210ENST00000539303 RAB15P59190 212 aa5.67□□□□□ -1.5
SNHG1-210ENST00000539303 CLDN10P78369 228 aa5.67□□□□□ -1.5
SNHG1-210ENST00000539303 TRIM32Q13049 653 aa5.67□□□□□ -1.5
SNHG1-210ENST00000539303 PTK7Q13308 1070 aa5.67□□□□□ -1.5
SNHG1-210ENST00000539303 OXLD1Q5BKU9 147 aa5.67□□□□□ -1.5
SNHG1-210ENST00000539303 EMID1Q96A84 441 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-210ENST00000539303 ZNF594Q96JF6 807 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-210ENST00000539303 RASA1P20936 1047 aa5.66□□□□□ -1.5
SNHG1-210ENST00000539303 PPP1R18Q6NYC8 613 aa5.66□□□□□ -1.5
SNHG1-210ENST00000539303 SLC10A4Q96EP9 437 aa5.66□□□□□ -1.5
SNHG1-210ENST00000539303 GZF1Q9H116 711 aaPredicted RBP5.66□□□□□ -1.5
SNHG1-210ENST00000539303 DOLKQ9UPQ8 538 aa5.66□□□□□ -1.5
SNHG1-210ENST00000539303 FAM196BA6NMK8 535 aa5.65□□□□□ -1.5
SNHG1-210ENST00000539303 ELOAQ14241 798 aaKnown RBP5.65□□□□□ -1.5
SNHG1-210ENST00000539303 EML3Q32P44 896 aa5.65□□□□□ -1.5
SNHG1-210ENST00000539303 OGFOD1Q8N543 542 aa5.65□□□□□ -1.5
SNHG1-210ENST00000539303 ESPNB1AK53 854 aa5.64□□□□□ -1.51
SNHG1-210ENST00000539303 ZBTB24O43167 697 aaPredicted RBP5.64□□□□□ -1.51
SNHG1-210ENST00000539303 LGR5O75473 907 aa5.64□□□□□ -1.51
SNHG1-210ENST00000539303 DKK1O94907 266 aa5.64□□□□□ -1.51
SNHG1-210ENST00000539303 BRD1O95696 1058 aa5.64□□□□□ -1.51
SNHG1-210ENST00000539303 SCNN1AP37088 669 aa5.64□□□□□ -1.51
SNHG1-210ENST00000539303 SCTRP47872 440 aa5.64□□□□□ -1.51
SNHG1-210ENST00000539303 MCCD1P59942 119 aaPredicted RBP5.64□□□□□ -1.51
SNHG1-210ENST00000539303 FAM69CQ0P6D2 419 aa5.64□□□□□ -1.51
SNHG1-210ENST00000539303 DPYDQ12882 1025 aa5.64□□□□□ -1.51
SNHG1-210ENST00000539303 IFFO2Q5TF58 517 aa5.64□□□□□ -1.51
SNHG1-210ENST00000539303 PHLDB3Q6NSJ2 640 aa5.64□□□□□ -1.51
SNHG1-210ENST00000539303 LIAT1Q6ZQX7 453 aa5.64□□□□□ -1.51
SNHG1-210ENST00000539303 TRMT44Q8IYL2 757 aaKnown RBP5.64□□□□□ -1.51
SNHG1-210ENST00000539303 ANKLE1Q8NAG6 615 aa5.64□□□□□ -1.51
SNHG1-210ENST00000539303 PCDHB11Q9Y5F2 797 aa5.64□□□□□ -1.51
SNHG1-210ENST00000539303 ATP5J2-PTCD1G3V325 749 aa5.63□□□□□ -1.51
SNHG1-210ENST00000539303 ZBTB7BO15156 539 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-210ENST00000539303 MAP7D1Q3KQU3 841 aa5.63□□□□□ -1.51
SNHG1-210ENST00000539303 LARP1Q6PKG0 1096 aaKnown RBP5.63□□□□□ -1.51
SNHG1-210ENST00000539303 ANKMY2Q8IV38 441 aa5.63□□□□□ -1.51
SNHG1-210ENST00000539303 ZNF592Q92610 1267 aa5.63□□□□□ -1.51
SNHG1-210ENST00000539303 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.63□□□□□ -1.51
SNHG1-210ENST00000539303 TLL2Q9Y6L7 1015 aa5.63□□□□□ -1.51
SNHG1-210ENST00000539303 IVNS1ABPQ9Y6Y0 642 aa5.63□□□□□ -1.51
SNHG1-210ENST00000539303 STAU1O95793 577 aaKnown RBP5.62□□□□□ -1.51
SNHG1-210ENST00000539303 GTF2IP78347 998 aa5.62□□□□□ -1.51
SNHG1-210ENST00000539303 ARID5BQ14865 1188 aa5.62□□□□□ -1.51
SNHG1-210ENST00000539303 NBPF20Q3BBV1 942 aa5.62□□□□□ -1.51
SNHG1-210ENST00000539303 INTS6LQ5JSJ4 861 aaKnown RBP5.62□□□□□ -1.51
SNHG1-210ENST00000539303 KCTD15Q96SI1 283 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-210ENST00000539303 DNAAF2Q9NVR5 837 aaKnown RBP5.62□□□□□ -1.51
SNHG1-210ENST00000539303 NOD1Q9Y239 953 aa5.62□□□□□ -1.51
SNHG1-210ENST00000539303 SFI1A8K8P3 1242 aa5.61□□□□□ -1.51
SNHG1-210ENST00000539303 ERVH48-1M5A8F1 160 aa5.61□□□□□ -1.51
SNHG1-210ENST00000539303 PDE4CQ08493 712 aa5.61□□□□□ -1.51
SNHG1-210ENST00000539303 KCNA1Q09470 495 aa5.61□□□□□ -1.51
SNHG1-210ENST00000539303 VASH1Q7L8A9 365 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-210ENST00000539303 FAM200AQ8TCP9 573 aa5.61□□□□□ -1.51
SNHG1-210ENST00000539303 TMPRSS4Q9NRS4 437 aa5.61□□□□□ -1.51
SNHG1-210ENST00000539303 PCDHGA11Q9Y5H2 935 aa5.61□□□□□ -1.51
SNHG1-210ENST00000539303 LZTS3O60299 673 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-210ENST00000539303 FSHRP23945 695 aa5.6□□□□□ -1.51
SNHG1-210ENST00000539303 VARSP26640 1264 aaKnown RBP5.6□□□□□ -1.51
SNHG1-210ENST00000539303 GGCXP38435 758 aa5.6□□□□□ -1.51
SNHG1-210ENST00000539303 WNT7BP56706 349 aa5.6□□□□□ -1.51
SNHG1-210ENST00000539303 RC3H1Q5TC82 1133 aaKnown RBP5.6□□□□□ -1.51
SNHG1-210ENST00000539303 SIX5Q8N196 739 aa5.6□□□□□ -1.51
SNHG1-210ENST00000539303 EHBP1Q8NDI1 1231 aa5.6□□□□□ -1.51
SNHG1-210ENST00000539303 TPCN2Q8NHX9 752 aa5.6□□□□□ -1.51
SNHG1-210ENST00000539303 GAS2L2Q8NHY3 880 aa5.6□□□□□ -1.51
SNHG1-210ENST00000539303 PRMT3O60678 531 aa5.59□□□□□ -1.51
SNHG1-210ENST00000539303 TMCO4Q5TGY1 634 aa5.59□□□□□ -1.51
SNHG1-210ENST00000539303 CCDC102BQ68D86 513 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms