RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 GCC1Q96CN9 775 aa21.95■■□□□ 1.11
TRA2A-211ENST00000538367 CD2BP2O95400 341 aaKnown RBP21.95■■□□□ 1.1
TRA2A-211ENST00000538367 CAVIN1Q6NZI2 390 aaKnown RBP21.95■■□□□ 1.1
TRA2A-211ENST00000538367 LRSAM1Q6UWE0 723 aa21.95■■□□□ 1.1
TRA2A-211ENST00000538367 IPO8O15397 1037 aaKnown RBP21.94■■□□□ 1.1
TRA2A-211ENST00000538367 NSD2O96028 1365 aa21.94■■□□□ 1.1
TRA2A-211ENST00000538367 ZSCAN20P17040 1043 aaPredicted RBP21.94■■□□□ 1.1
TRA2A-211ENST00000538367 RRP7AQ9Y3A4 280 aaKnown RBP21.94■■□□□ 1.1
TRA2A-211ENST00000538367 MORC1Q86VD1 984 aa21.93■■□□□ 1.1
TRA2A-211ENST00000538367 NSD3Q9BZ95 1437 aa21.93■■□□□ 1.1
TRA2A-211ENST00000538367 SETBP1Q9Y6X0 1596 aa21.93■■□□□ 1.1
TRA2A-211ENST00000538367 KIAA2012Q0VF49 1180 aa21.92■■□□□ 1.1
TRA2A-211ENST00000538367 PPP6R1Q9UPN7 881 aa21.92■■□□□ 1.1
TRA2A-211ENST00000538367 FGD1P98174 961 aa21.92■■□□□ 1.1
TRA2A-211ENST00000538367 NEUROD2Q15784 382 aa21.92■■□□□ 1.1
TRA2A-211ENST00000538367 MCTP1Q6DN14 999 aa21.92■■□□□ 1.1
TRA2A-211ENST00000538367 IFT172Q9UG01 1749 aa21.92■■□□□ 1.1
TRA2A-211ENST00000538367 LETM1O95202 739 aaPredicted RBP21.91■■□□□ 1.1
TRA2A-211ENST00000538367 PRIM1P49642 420 aaKnown RBP21.91■■□□□ 1.1
TRA2A-211ENST00000538367 KIF1BO60333 1816 aa21.91■■□□□ 1.1
TRA2A-211ENST00000538367 TBC1D9Q6ZT07 1266 aa21.91■■□□□ 1.1
TRA2A-211ENST00000538367 MBD3O95983 291 aa21.9■■□□□ 1.1
TRA2A-211ENST00000538367 CLTCQ00610 1675 aaKnown RBP21.9■■□□□ 1.1
TRA2A-211ENST00000538367 CDC45O75419 566 aa21.89■■□□□ 1.1
TRA2A-211ENST00000538367 BRPF1P55201 1214 aaPredicted RBP21.88■■□□□ 1.09
TRA2A-211ENST00000538367 ALDH1L2Q3SY69 923 aa21.88■■□□□ 1.09
TRA2A-211ENST00000538367 LNPKQ9C0E8 428 aa21.88■■□□□ 1.09
TRA2A-211ENST00000538367 UGGT1Q9NYU2 1555 aa21.88■■□□□ 1.09
TRA2A-211ENST00000538367 NRXN1Q9ULB1 1477 aa21.88■■□□□ 1.09
TRA2A-211ENST00000538367 TMEM57Q8N5G2 664 aa21.88■■□□□ 1.09
TRA2A-211ENST00000538367 SSH1Q8WYL5 1049 aa21.88■■□□□ 1.09
TRA2A-211ENST00000538367 ZNF428Q96B54 188 aa21.88■■□□□ 1.09
TRA2A-211ENST00000538367 PREX1Q8TCU6 1659 aa21.86■■□□□ 1.09
TRA2A-211ENST00000538367 TAF3Q5VWG9 929 aa21.86■■□□□ 1.09
TRA2A-211ENST00000538367 FOXD4L1Q9NU39 408 aa21.86■■□□□ 1.09
TRA2A-211ENST00000538367 PIK3R4Q99570 1358 aa21.85■■□□□ 1.09
TRA2A-211ENST00000538367 MLECQ14165 292 aa21.85■■□□□ 1.09
TRA2A-211ENST00000538367 EXOSC9Q06265 439 aaKnown RBP21.84■■□□□ 1.09
TRA2A-211ENST00000538367 NOB1Q9ULX3 412 aaKnown RBP21.84■■□□□ 1.09
TRA2A-211ENST00000538367 AK9Q5TCS8 1911 aa21.84■■□□□ 1.09
TRA2A-211ENST00000538367 GPT2Q8TD30 523 aa21.83■■□□□ 1.09
TRA2A-211ENST00000538367 A0A0U1RQG5 324 aaPredicted RBP21.83■■□□□ 1.08
TRA2A-211ENST00000538367 KLHL34Q8N239 644 aa21.83■■□□□ 1.08
TRA2A-211ENST00000538367 ZHX1Q9UKY1 873 aaPredicted RBP21.83■■□□□ 1.08
TRA2A-211ENST00000538367 PIK3C2BO00750 1634 aa21.82■■□□□ 1.08
TRA2A-211ENST00000538367 PPIP5K1Q6PFW1 1433 aa21.82■■□□□ 1.08
TRA2A-211ENST00000538367 PIBF1Q8WXW3 757 aa21.82■■□□□ 1.08
TRA2A-211ENST00000538367 MROH2AA6NES4 1674 aa21.81■■□□□ 1.08
TRA2A-211ENST00000538367 QRICH2Q9H0J4 1663 aa21.81■■□□□ 1.08
TRA2A-211ENST00000538367 MTHFSP49914 203 aa21.8■■□□□ 1.08
TRA2A-211ENST00000538367 UVSSAQ2YD98 709 aa21.8■■□□□ 1.08
TRA2A-211ENST00000538367 FAM184AQ8NB25 1140 aa21.8■■□□□ 1.08
TRA2A-211ENST00000538367 SYAP1Q96A49 352 aaPredicted RBP21.8■■□□□ 1.08
TRA2A-211ENST00000538367 PUS7Q96PZ0 661 aaKnown RBP21.8■■□□□ 1.08
TRA2A-211ENST00000538367 RBM42Q9BTD8 480 aaKnown RBP21.8■■□□□ 1.08
TRA2A-211ENST00000538367 PRDM10Q9NQV6 1147 aa21.79■■□□□ 1.08
TRA2A-211ENST00000538367 PTCH1Q13635 1447 aa21.79■■□□□ 1.08
TRA2A-211ENST00000538367 ST18O60284 1047 aa21.79■■□□□ 1.08
TRA2A-211ENST00000538367 PHF14O94880 888 aa21.79■■□□□ 1.08
TRA2A-211ENST00000538367 ESF1Q9H501 851 aaKnown RBP21.79■■□□□ 1.08
TRA2A-211ENST00000538367 TMEM63CQ9P1W3 806 aa21.79■■□□□ 1.08
TRA2A-211ENST00000538367 ADGRB3O60242 1522 aa21.78■■□□□ 1.08
TRA2A-211ENST00000538367 PRPF40AO75400 957 aaKnown RBP21.78■■□□□ 1.08
TRA2A-211ENST00000538367 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.78■■□□□ 1.087e-9■■■■■ 29.7
TRA2A-211ENST00000538367 PTMAP06454 111 aaKnown RBP21.77■■□□□ 1.08
TRA2A-211ENST00000538367 ANKRD45Q5TZF3 282 aa21.77■■□□□ 1.08
TRA2A-211ENST00000538367 ARHGAP45Q92619 1136 aa21.77■■□□□ 1.08
TRA2A-211ENST00000538367 TSR2Q969E8 191 aaKnown RBP21.77■■□□□ 1.08
TRA2A-211ENST00000538367 ZNF710Q8N1W2 664 aa21.77■■□□□ 1.08
TRA2A-211ENST00000538367 TSPY26PQ9H489 355 aa21.77■■□□□ 1.08
TRA2A-211ENST00000538367 SPTLC3Q9NUV7 552 aa21.77■■□□□ 1.08
TRA2A-211ENST00000538367 PPP4R3BQ5MIZ7 849 aa21.76■■□□□ 1.07
TRA2A-211ENST00000538367 KIF3AQ9Y496 699 aa21.76■■□□□ 1.07
TRA2A-211ENST00000538367 SYCE3A1L190 88 aa21.76■■□□□ 1.07
TRA2A-211ENST00000538367 U2AF1L5P0DN76 240 aaPredicted RBP21.75■■□□□ 1.07
TRA2A-211ENST00000538367 U2AF1Q01081 240 aaKnown RBP eCLIP21.75■■□□□ 1.071e-7■■■□□ 15.2
TRA2A-211ENST00000538367 PLEKHF1Q96S99 279 aa21.75■■□□□ 1.07
TRA2A-211ENST00000538367 COL3A1P02461 1466 aaPredicted RBP21.75■■□□□ 1.07
TRA2A-211ENST00000538367 TMPOP42166 694 aaKnown RBP21.74■■□□□ 1.07
TRA2A-211ENST00000538367 RBM27Q9P2N5 1060 aaKnown RBP21.74■■□□□ 1.07
TRA2A-211ENST00000538367 TRIM35Q9UPQ4 493 aa21.74■■□□□ 1.07
TRA2A-211ENST00000538367 SPATA31D1Q6ZQQ2 1576 aa21.74■■□□□ 1.07
TRA2A-211ENST00000538367 FKBP5Q13451 457 aaPredicted RBP21.73■■□□□ 1.07
TRA2A-211ENST00000538367 USP26Q9BXU7 913 aa21.73■■□□□ 1.07
TRA2A-211ENST00000538367 KIF24Q5T7B8 1368 aa21.73■■□□□ 1.07
TRA2A-211ENST00000538367 DNTTIP2Q5QJE6 756 aaKnown RBP21.73■■□□□ 1.07
TRA2A-211ENST00000538367 INTS3Q68E01 1043 aaKnown RBP21.73■■□□□ 1.07
TRA2A-211ENST00000538367 SLC52A1Q9NWF4 448 aa21.73■■□□□ 1.07
TRA2A-211ENST00000538367 ZBTB7BO15156 539 aaPredicted RBP21.72■■□□□ 1.07
TRA2A-211ENST00000538367 ZDHHC9Q9Y397 364 aa21.72■■□□□ 1.07
TRA2A-211ENST00000538367 ANKRD36BQ8N2N9 1353 aa21.71■■□□□ 1.07
TRA2A-211ENST00000538367 CHGAP10645 457 aaKnown RBP21.71■■□□□ 1.07
TRA2A-211ENST00000538367 NOLC1Q14978 699 aaKnown RBP eCLIP21.71■■□□□ 1.07
TRA2A-211ENST00000538367 FBXO31Q5XUX0 539 aaPredicted RBP21.71■■□□□ 1.07
TRA2A-211ENST00000538367 FER1L4A9Z1Z3 1794 aa21.71■■□□□ 1.07
TRA2A-211ENST00000538367 ANKRD26Q9UPS8 1709 aa21.71■■□□□ 1.07
TRA2A-211ENST00000538367 PPLO60437 1756 aa21.71■■□□□ 1.07
TRA2A-211ENST00000538367 CFAP70Q5T0N1 1121 aa21.71■■□□□ 1.07
TRA2A-211ENST00000538367 MCM2P49736 904 aa21.7■■□□□ 1.06
TRA2A-211ENST00000538367 FEZ1Q99689 392 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms