RNA–Protein interactions for RNA: ENST00000537869.5

SNHG1-205, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 1,038 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-205ENST00000537869 SH3BP2P78314 561 aa10.45□□□□□ -0.74
SNHG1-205ENST00000537869 ELOAQ14241 798 aaKnown RBP10.45□□□□□ -0.74
SNHG1-205ENST00000537869 ZMIZ1Q9ULJ6 1067 aa10.45□□□□□ -0.74
SNHG1-205ENST00000537869 TRAF7Q6Q0C0 670 aa10.44□□□□□ -0.74
SNHG1-205ENST00000537869 HCSTQ9UBK5 93 aa10.44□□□□□ -0.74
SNHG1-205ENST00000537869 RNF223E7ERA6 249 aa10.43□□□□□ -0.74
SNHG1-205ENST00000537869 LZTS3O60299 673 aaPredicted RBP10.43□□□□□ -0.74
SNHG1-205ENST00000537869 BRD1O95696 1058 aa10.43□□□□□ -0.74
SNHG1-205ENST00000537869 MAP7D1Q3KQU3 841 aa10.43□□□□□ -0.74
SNHG1-205ENST00000537869 CRTC2Q53ET0 693 aaPredicted RBP10.43□□□□□ -0.74
SNHG1-205ENST00000537869 CCDC85AQ96PX6 553 aaPredicted RBP10.43□□□□□ -0.74
SNHG1-205ENST00000537869 NOVA2Q9UNW9 492 aaKnown RBP10.43□□□□□ -0.74
SNHG1-205ENST00000537869 ITGBL1O95965 494 aaPredicted RBP10.42□□□□□ -0.74
SNHG1-205ENST00000537869 RASA1P20936 1047 aa10.42□□□□□ -0.74
SNHG1-205ENST00000537869 TMEM164Q5U3C3 297 aa10.42□□□□□ -0.74
SNHG1-205ENST00000537869 STK32AQ8WU08 396 aa10.42□□□□□ -0.74
SNHG1-205ENST00000537869 FAM196BA6NMK8 535 aa10.41□□□□□ -0.74
SNHG1-205ENST00000537869 PTK7Q13308 1070 aa10.41□□□□□ -0.74
SNHG1-205ENST00000537869 EML3Q32P44 896 aa10.41□□□□□ -0.74
SNHG1-205ENST00000537869 PLA2G2CQ5R387 149 aa10.41□□□□□ -0.74
SNHG1-205ENST00000537869 LARP1Q6PKG0 1096 aaKnown RBP10.41□□□□□ -0.74
SNHG1-205ENST00000537869 C1QTNF2Q9BXJ5 285 aa10.41□□□□□ -0.74
SNHG1-205ENST00000537869 GZF1Q9H116 711 aaPredicted RBP10.41□□□□□ -0.74
SNHG1-205ENST00000537869 USP17L15C9J2P7 530 aa10.4□□□□□ -0.74
SNHG1-205ENST00000537869 USP17L10C9JJH3 530 aa10.4□□□□□ -0.74
SNHG1-205ENST00000537869 USP17L13C9JLJ4 530 aa10.4□□□□□ -0.74
SNHG1-205ENST00000537869 USP17L12C9JPN9 530 aa10.4□□□□□ -0.74
SNHG1-205ENST00000537869 USP17L11C9JVI0 530 aa10.4□□□□□ -0.74
SNHG1-205ENST00000537869 USP17L21D6R901 530 aa10.4□□□□□ -0.74
SNHG1-205ENST00000537869 USP17L18D6R9N7 530 aa10.4□□□□□ -0.74
SNHG1-205ENST00000537869 USP17L22D6RA61 530 aa10.4□□□□□ -0.74
SNHG1-205ENST00000537869 USP17L17D6RBQ6 530 aa10.4□□□□□ -0.74
SNHG1-205ENST00000537869 USP17L19D6RCP7 530 aa10.4□□□□□ -0.74
SNHG1-205ENST00000537869 USP17L20D6RJB6 530 aa10.4□□□□□ -0.74
SNHG1-205ENST00000537869 ATP5J2-PTCD1G3V325 749 aa10.4□□□□□ -0.74
SNHG1-205ENST00000537869 ZBTB24O43167 697 aaPredicted RBP10.4□□□□□ -0.74
SNHG1-205ENST00000537869 USP17L24Q0WX57 530 aa10.4□□□□□ -0.74
SNHG1-205ENST00000537869 RNF166Q96A37 237 aaPredicted RBP10.4□□□□□ -0.74
SNHG1-205ENST00000537869 SLC10A4Q96EP9 437 aa10.4□□□□□ -0.74
SNHG1-205ENST00000537869 DOLKQ9UPQ8 538 aa10.39□□□□□ -0.75
SNHG1-205ENST00000537869 KCNA1Q09470 495 aa10.38□□□□□ -0.75
SNHG1-205ENST00000537869 TRIM32Q13049 653 aa10.38□□□□□ -0.75
SNHG1-205ENST00000537869 OGFOD1Q8N543 542 aa10.38□□□□□ -0.75
SNHG1-205ENST00000537869 ANKLE1Q8NAG6 615 aa10.38□□□□□ -0.75
SNHG1-205ENST00000537869 CDCA7Q9BWT1 371 aaPredicted RBP10.38□□□□□ -0.75
SNHG1-205ENST00000537869 CLDN10P78369 228 aa10.37□□□□□ -0.75
SNHG1-205ENST00000537869 SKOR1P84550 965 aa10.37□□□□□ -0.75
SNHG1-205ENST00000537869 OXLD1Q5BKU9 147 aa10.37□□□□□ -0.75
SNHG1-205ENST00000537869 RNF20Q5VTR2 975 aa10.37□□□□□ -0.75
SNHG1-205ENST00000537869 SPNS2Q8IVW8 549 aa10.37□□□□□ -0.75
SNHG1-205ENST00000537869 TRMT44Q8IYL2 757 aaKnown RBP10.37□□□□□ -0.75
SNHG1-205ENST00000537869 NOD1Q9Y239 953 aa10.37□□□□□ -0.75
SNHG1-205ENST00000537869 CCDC9Q9Y3X0 531 aaKnown RBP10.37□□□□□ -0.75
SNHG1-205ENST00000537869 ESPNB1AK53 854 aa10.36□□□□□ -0.75
SNHG1-205ENST00000537869 GGCXP38435 758 aa10.36□□□□□ -0.75
SNHG1-205ENST00000537869 PPP1R18Q6NYC8 613 aa10.36□□□□□ -0.75
SNHG1-205ENST00000537869 ANKMY2Q8IV38 441 aa10.36□□□□□ -0.75
SNHG1-205ENST00000537869 FAM200AQ8TCP9 573 aa10.36□□□□□ -0.75
SNHG1-205ENST00000537869 ZBTB7BO15156 539 aaPredicted RBP10.35□□□□□ -0.75
SNHG1-205ENST00000537869 NBPF20Q3BBV1 942 aa10.35□□□□□ -0.75
SNHG1-205ENST00000537869 TRIM50Q86XT4 487 aa10.35□□□□□ -0.75
SNHG1-205ENST00000537869 ZNF594Q96JF6 807 aaPredicted RBP10.35□□□□□ -0.75
SNHG1-205ENST00000537869 PATL2C9JE40 543 aaKnown RBP10.34□□□□□ -0.75
SNHG1-205ENST00000537869 FAM69CQ0P6D2 419 aa10.34□□□□□ -0.75
SNHG1-205ENST00000537869 DPYDQ12882 1025 aa10.34□□□□□ -0.75
SNHG1-205ENST00000537869 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.34□□□□□ -0.75
SNHG1-205ENST00000537869 DNAAF2Q9NVR5 837 aaKnown RBP10.34□□□□□ -0.75
SNHG1-205ENST00000537869 CDV3Q9UKY7 258 aaKnown RBP10.34□□□□□ -0.75
SNHG1-205ENST00000537869 VARSP26640 1264 aaKnown RBP10.33□□□□□ -0.76
SNHG1-205ENST00000537869 WNT7BP56706 349 aa10.33□□□□□ -0.76
SNHG1-205ENST00000537869 RAB15P59190 212 aa10.33□□□□□ -0.76
SNHG1-205ENST00000537869 KCTD15Q96SI1 283 aaPredicted RBP10.33□□□□□ -0.76
SNHG1-205ENST00000537869 SLAIN2Q9P270 581 aa10.33□□□□□ -0.76
SNHG1-205ENST00000537869 KIAA1024Q9UPX6 916 aa10.33□□□□□ -0.76
SNHG1-205ENST00000537869 PCDHB11Q9Y5F2 797 aa10.33□□□□□ -0.76
SNHG1-205ENST00000537869 ATP1A2P50993 1020 aa10.32□□□□□ -0.76
SNHG1-205ENST00000537869 GTF2IP78347 998 aa10.32□□□□□ -0.76
SNHG1-205ENST00000537869 SEPT12Q8IYM1 358 aa10.32□□□□□ -0.76
SNHG1-205ENST00000537869 LARGE2Q8N3Y3 721 aa10.32□□□□□ -0.76
SNHG1-205ENST00000537869 PCDH10Q9P2E7 1040 aa10.32□□□□□ -0.76
SNHG1-205ENST00000537869 DKK1O94907 266 aa10.31□□□□□ -0.76
SNHG1-205ENST00000537869 RPIAP49247 311 aa10.31□□□□□ -0.76
SNHG1-205ENST00000537869 USP4Q13107 963 aa10.31□□□□□ -0.76
SNHG1-205ENST00000537869 PHLDB3Q6NSJ2 640 aa10.31□□□□□ -0.76
SNHG1-205ENST00000537869 PCDHGA11Q9Y5H2 935 aa10.31□□□□□ -0.76
SNHG1-205ENST00000537869 IVNS1ABPQ9Y6Y0 642 aa10.31□□□□□ -0.76
SNHG1-205ENST00000537869 TMCO4Q5TGY1 634 aa10.3□□□□□ -0.76
SNHG1-205ENST00000537869 VASH1Q7L8A9 365 aaPredicted RBP10.3□□□□□ -0.76
SNHG1-205ENST00000537869 CD2BP2O95400 341 aaKnown RBP10.29□□□□□ -0.76
SNHG1-205ENST00000537869 INTS6LQ5JSJ4 861 aaKnown RBP10.29□□□□□ -0.76
SNHG1-205ENST00000537869 RC3H1Q5TC82 1133 aaKnown RBP10.29□□□□□ -0.76
SNHG1-205ENST00000537869 SIX5Q8N196 739 aa10.29□□□□□ -0.76
SNHG1-205ENST00000537869 EHBP1Q8NDI1 1231 aa10.29□□□□□ -0.76
SNHG1-205ENST00000537869 SSFA2P28290 1259 aa10.28□□□□□ -0.76
SNHG1-205ENST00000537869 ARID5BQ14865 1188 aa10.28□□□□□ -0.76
SNHG1-205ENST00000537869 CCDC102BQ68D86 513 aa10.28□□□□□ -0.76
SNHG1-205ENST00000537869 B4GALNT3Q6L9W6 998 aa10.28□□□□□ -0.76
SNHG1-205ENST00000537869 LIAT1Q6ZQX7 453 aa10.28□□□□□ -0.76
SNHG1-205ENST00000537869 CCDC125Q86Z20 511 aa10.28□□□□□ -0.76
SNHG1-205ENST00000537869 CLP1Q92989 425 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms