RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 ZBTB7CA1YPR0 619 aa25.44■■□□□ 1.66
LTBR-206ENST00000536876 AXIN2Q9Y2T1 843 aa25.44■■□□□ 1.66
LTBR-206ENST00000536876 BCL9O00512 1426 aa25.44■■□□□ 1.66
LTBR-206ENST00000536876 NLRP6P59044 892 aa25.43■■□□□ 1.66
LTBR-206ENST00000536876 WDR17Q8IZU2 1322 aa25.42■■□□□ 1.66
LTBR-206ENST00000536876 NINLQ9Y2I6 1382 aa25.42■■□□□ 1.66
LTBR-206ENST00000536876 KCNQ2O43526 872 aa25.41■■□□□ 1.66
LTBR-206ENST00000536876 SPON1Q9HCB6 807 aa25.41■■□□□ 1.66
LTBR-206ENST00000536876 NHSQ6T4R5 1651 aa25.41■■□□□ 1.66
LTBR-206ENST00000536876 PLSCR1O15162 318 aa25.4■■□□□ 1.66
LTBR-206ENST00000536876 DDB1Q16531 1140 aa25.4■■□□□ 1.66
LTBR-206ENST00000536876 MARCH10Q8NA82 808 aaPredicted RBP25.4■■□□□ 1.66
LTBR-206ENST00000536876 ABCC6O95255 1503 aa25.4■■□□□ 1.66
LTBR-206ENST00000536876 C11orf95C9JLR9 678 aaPredicted RBP25.39■■□□□ 1.66
LTBR-206ENST00000536876 PDGFDQ9GZP0 370 aaPredicted RBP25.39■■□□□ 1.66
LTBR-206ENST00000536876 TOM1L2Q6ZVM7 507 aa25.38■■□□□ 1.65
LTBR-206ENST00000536876 PROM2Q8N271 834 aa25.38■■□□□ 1.65
LTBR-206ENST00000536876 LTN1O94822 1766 aa25.37■■□□□ 1.65
LTBR-206ENST00000536876 ARHGEF25Q86VW2 580 aa25.37■■□□□ 1.65
LTBR-206ENST00000536876 PAPPAQ13219 1627 aa25.37■■□□□ 1.65
LTBR-206ENST00000536876 TTC21BQ7Z4L5 1316 aa25.37■■□□□ 1.65
LTBR-206ENST00000536876 YY1P25490 414 aa25.36■■□□□ 1.65
LTBR-206ENST00000536876 BCL11BQ9C0K0 894 aaPredicted RBP25.36■■□□□ 1.65
LTBR-206ENST00000536876 L3MBTL2Q969R5 705 aa25.35■■□□□ 1.65
LTBR-206ENST00000536876 TNS2Q63HR2 1409 aa25.35■■□□□ 1.65
LTBR-206ENST00000536876 EVC2Q86UK5 1308 aa25.34■■□□□ 1.65
LTBR-206ENST00000536876 PPP1R1BQ9UD71 204 aaPredicted RBP25.33■■□□□ 1.65
LTBR-206ENST00000536876 UTRNP46939 3433 aa25.32■■□□□ 1.64
LTBR-206ENST00000536876 CD163L1Q9NR16 1453 aa25.31■■□□□ 1.64
LTBR-206ENST00000536876 BTAF1O14981 1849 aa25.3■■□□□ 1.64
LTBR-206ENST00000536876 CARD10Q9BWT7 1032 aa25.3■■□□□ 1.64
LTBR-206ENST00000536876 TTC21AQ8NDW8 1320 aa25.29■■□□□ 1.64
LTBR-206ENST00000536876 SOX12O15370 315 aa25.28■■□□□ 1.64
LTBR-206ENST00000536876 PTGER2P43116 358 aa25.28■■□□□ 1.64
LTBR-206ENST00000536876 CDCA7Q9BWT1 371 aaPredicted RBP25.28■■□□□ 1.64
LTBR-206ENST00000536876 ROCK2O75116 1388 aaKnown RBP25.27■■□□□ 1.64
LTBR-206ENST00000536876 ZBTB7AO95365 584 aa25.26■■□□□ 1.63
LTBR-206ENST00000536876 KCNH5Q8NCM2 988 aa25.26■■□□□ 1.63
LTBR-206ENST00000536876 CCDC7Q96M83 1385 aa25.26■■□□□ 1.63
LTBR-206ENST00000536876 TXNRD1Q16881 649 aa25.25■■□□□ 1.63
LTBR-206ENST00000536876 KTN1Q86UP2 1357 aaKnown RBP25.25■■□□□ 1.63
LTBR-206ENST00000536876 SIN3AQ96ST3 1273 aa25.24■■□□□ 1.63
LTBR-206ENST00000536876 ZNF692Q9BU19 519 aaPredicted RBP25.24■■□□□ 1.63
LTBR-206ENST00000536876 USP31Q70CQ4 1352 aa25.23■■□□□ 1.63
LTBR-206ENST00000536876 SBNO2Q9Y2G9 1366 aa25.22■■□□□ 1.63
LTBR-206ENST00000536876 CSB-PGBD3P0DP91 1061 aa25.22■■□□□ 1.63
LTBR-206ENST00000536876 TUBGCP6Q96RT7 1819 aa25.21■■□□□ 1.63
LTBR-206ENST00000536876 QSER1Q2KHR3 1735 aa25.21■■□□□ 1.63
LTBR-206ENST00000536876 CHD4Q14839 1912 aa25.21■■□□□ 1.63
LTBR-206ENST00000536876 ERBB3P21860 1342 aa25.2■■□□□ 1.62
LTBR-206ENST00000536876 SGIP1Q9BQI5 828 aa25.2■■□□□ 1.62
LTBR-206ENST00000536876 COL24A1Q17RW2 1714 aa25.2■■□□□ 1.62
LTBR-206ENST00000536876 SLC15A2Q16348 729 aa25.19■■□□□ 1.62
LTBR-206ENST00000536876 SHANK3Q9BYB0 1731 aa25.18■■□□□ 1.62
LTBR-206ENST00000536876 FAM208AQ9UK61 1670 aaKnown RBP25.18■■□□□ 1.62
LTBR-206ENST00000536876 EXOC5O00471 708 aa25.18■■□□□ 1.62
LTBR-206ENST00000536876 ATF5Q9Y2D1 282 aaPredicted RBP25.18■■□□□ 1.62
LTBR-206ENST00000536876 STK32BQ9NY57 414 aa25.17■■□□□ 1.62
LTBR-206ENST00000536876 NME9Q86XW9 330 aa25.16■■□□□ 1.62
LTBR-206ENST00000536876 RGPD2P0DJD1 1756 aa25.14■■□□□ 1.62
LTBR-206ENST00000536876 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.14■■□□□ 1.62
LTBR-206ENST00000536876 ACSBG1Q96GR2 724 aa25.14■■□□□ 1.62
LTBR-206ENST00000536876 DOT1LQ8TEK3 1739 aa25.14■■□□□ 1.61
LTBR-206ENST00000536876 KAT6BQ8WYB5 2073 aa25.14■■□□□ 1.61
LTBR-206ENST00000536876 FHDC1Q9C0D6 1143 aaPredicted RBP25.13■■□□□ 1.61
LTBR-206ENST00000536876 ZNF827Q17R98 1081 aa25.11■■□□□ 1.61
LTBR-206ENST00000536876 SYT17Q9BSW7 474 aa25.11■■□□□ 1.61
LTBR-206ENST00000536876 MTFR1LQ9H019 292 aa25.11■■□□□ 1.61
LTBR-206ENST00000536876 LY75O60449 1722 aa25.11■■□□□ 1.61
LTBR-206ENST00000536876 EDC4Q6P2E9 1401 aaKnown RBP25.11■■□□□ 1.61
LTBR-206ENST00000536876 DCAF8L1A6NGE4 600 aa25.1■■□□□ 1.61
LTBR-206ENST00000536876 A0A1W2PP64 1363 aa25.09■■□□□ 1.61
LTBR-206ENST00000536876 NEUROD1Q13562 356 aa25.09■■□□□ 1.61
LTBR-206ENST00000536876 NLRP2Q9NX02 1062 aa25.09■■□□□ 1.61
LTBR-206ENST00000536876 IL2RBP14784 551 aa25.08■■□□□ 1.61
LTBR-206ENST00000536876 LRRC4BQ9NT99 713 aa25.08■■□□□ 1.61
LTBR-206ENST00000536876 MAP3K5Q99683 1374 aa25.07■■□□□ 1.6
LTBR-206ENST00000536876 ZNF784Q8NCA9 323 aaPredicted RBP25.07■■□□□ 1.6
LTBR-206ENST00000536876 ANKRD24Q8TF21 1146 aa25.07■■□□□ 1.6
LTBR-206ENST00000536876 GOLGB1Q14789 3259 aaKnown RBP25.05■■□□□ 1.6
LTBR-206ENST00000536876 SLC12A5Q9H2X9 1139 aa25.04■■□□□ 1.6
LTBR-206ENST00000536876 NSD2O96028 1365 aa25.02■■□□□ 1.6
LTBR-206ENST00000536876 ARXQ96QS3 562 aa25.01■■□□□ 1.59
LTBR-206ENST00000536876 AKT1S1Q96B36 256 aa25■■□□□ 1.59
LTBR-206ENST00000536876 MEGF6O75095 1541 aa24.99■■□□□ 1.59
LTBR-206ENST00000536876 TMC1Q8TDI8 760 aa24.99■■□□□ 1.59
LTBR-206ENST00000536876 CARD11Q9BXL7 1154 aa24.99■■□□□ 1.59
LTBR-206ENST00000536876 HDGFL2Q7Z4V5 671 aaPredicted RBP24.98■■□□□ 1.59
LTBR-206ENST00000536876 PNPLA7Q6ZV29 1317 aa24.96■■□□□ 1.59
LTBR-206ENST00000536876 IP6K1Q92551 441 aa24.96■■□□□ 1.59
LTBR-206ENST00000536876 ANKRD36BQ8N2N9 1353 aa24.93■■□□□ 1.58
LTBR-206ENST00000536876 KCNQ4P56696 695 aa24.93■■□□□ 1.58
LTBR-206ENST00000536876 MAP3K19Q56UN5 1328 aa24.92■■□□□ 1.58
LTBR-206ENST00000536876 C5P01031 1676 aa24.92■■□□□ 1.58
LTBR-206ENST00000536876 LTV1Q96GA3 475 aaPredicted RBP24.92■■□□□ 1.58
LTBR-206ENST00000536876 TAF1LQ8IZX4 1826 aa24.91■■□□□ 1.58
LTBR-206ENST00000536876 FBLN1P23142 703 aa24.91■■□□□ 1.58
LTBR-206ENST00000536876 DDX54Q8TDD1 881 aaKnown RBP24.91■■□□□ 1.58
LTBR-206ENST00000536876 TESK2Q96S53 571 aa24.91■■□□□ 1.58
LTBR-206ENST00000536876 TERF2IPQ9NYB0 399 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms