RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 SOS2Q07890 1332 aaPredicted RBP17.07■□□□□ 0.32
CDK5RAP3-202ENST00000536708 SPATA31A3Q5VYP0 1347 aa17.07■□□□□ 0.32
CDK5RAP3-202ENST00000536708 RGPD2P0DJD1 1756 aa17.07■□□□□ 0.32
CDK5RAP3-202ENST00000536708 CABLES1Q8TDN4 633 aa17.06■□□□□ 0.32
CDK5RAP3-202ENST00000536708 B4GALNT3Q6L9W6 998 aa17.06■□□□□ 0.32
CDK5RAP3-202ENST00000536708 COL16A1Q07092 1604 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP3-202ENST00000536708 HSP90AB2PQ58FF8 381 aa17.05■□□□□ 0.32
CDK5RAP3-202ENST00000536708 FLT4P35916 1363 aa17.05■□□□□ 0.32
CDK5RAP3-202ENST00000536708 ZBTB7CA1YPR0 619 aa17.04■□□□□ 0.32
CDK5RAP3-202ENST00000536708 U2SURPO15042 1029 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-202ENST00000536708 DIAPH1O60610 1272 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-202ENST00000536708 PIP4K2BP78356 416 aa17.04■□□□□ 0.32
CDK5RAP3-202ENST00000536708 GCP02774 474 aa17.03■□□□□ 0.32
CDK5RAP3-202ENST00000536708 U2AF1L5P0DN76 240 aaPredicted RBP17.03■□□□□ 0.32
CDK5RAP3-202ENST00000536708 U2AF1Q01081 240 aaKnown RBP eCLIP17.03■□□□□ 0.326e-9■■■□□ 17
CDK5RAP3-202ENST00000536708 IQSEC2Q5JU85 1478 aa17.03■□□□□ 0.32
CDK5RAP3-202ENST00000536708 ARHGEF10O15013 1369 aa17.02■□□□□ 0.32
CDK5RAP3-202ENST00000536708 SALL2Q9Y467 1007 aaPredicted RBP17.02■□□□□ 0.32
CDK5RAP3-202ENST00000536708 COL18A1P39060 1754 aa17.01■□□□□ 0.31
CDK5RAP3-202ENST00000536708 IL13P35225 146 aa17.01■□□□□ 0.31
CDK5RAP3-202ENST00000536708 AMPHP49418 695 aa17.01■□□□□ 0.31
CDK5RAP3-202ENST00000536708 EIF4A2Q14240 407 aaKnown RBP17.01■□□□□ 0.31
CDK5RAP3-202ENST00000536708 HOXC9P31274 260 aa17■□□□□ 0.31
CDK5RAP3-202ENST00000536708 UBAP1LF5GYI3 381 aa17■□□□□ 0.31
CDK5RAP3-202ENST00000536708 KCNH5Q8NCM2 988 aa17■□□□□ 0.31
CDK5RAP3-202ENST00000536708 RTL1A6NKG5 1358 aa16.99■□□□□ 0.31
CDK5RAP3-202ENST00000536708 HMOX1P09601 288 aa16.99■□□□□ 0.31
CDK5RAP3-202ENST00000536708 ZC3H6P61129 1189 aaKnown RBP16.99■□□□□ 0.31
CDK5RAP3-202ENST00000536708 COL22A1Q8NFW1 1626 aaPredicted RBP16.99■□□□□ 0.31
CDK5RAP3-202ENST00000536708 DLG5Q8TDM6 1919 aa16.98■□□□□ 0.31
CDK5RAP3-202ENST00000536708 TOM1O60784 492 aa16.97■□□□□ 0.31
CDK5RAP3-202ENST00000536708 ARHGEF25Q86VW2 580 aa16.97■□□□□ 0.31
CDK5RAP3-202ENST00000536708 CERKQ8TCT0 537 aa16.97■□□□□ 0.31
CDK5RAP3-202ENST00000536708 LTV1Q96GA3 475 aaPredicted RBP16.97■□□□□ 0.31
CDK5RAP3-202ENST00000536708 APAF1O14727 1248 aa16.97■□□□□ 0.31
CDK5RAP3-202ENST00000536708 AEBP1Q8IUX7 1158 aa16.97■□□□□ 0.31
CDK5RAP3-202ENST00000536708 KIF24Q5T7B8 1368 aa16.96■□□□□ 0.31
CDK5RAP3-202ENST00000536708 KIAA0232Q92628 1395 aa16.96■□□□□ 0.31
CDK5RAP3-202ENST00000536708 LMO7Q8WWI1 1683 aa16.95■□□□□ 0.3
CDK5RAP3-202ENST00000536708 RRP1P56182 461 aaKnown RBP16.95■□□□□ 0.3
CDK5RAP3-202ENST00000536708 RRP7AQ9Y3A4 280 aaKnown RBP16.95■□□□□ 0.3
CDK5RAP3-202ENST00000536708 RSPH6AQ9H0K4 717 aa16.95■□□□□ 0.3
CDK5RAP3-202ENST00000536708 AXIN2Q9Y2T1 843 aa16.95■□□□□ 0.3
CDK5RAP3-202ENST00000536708 CAMTA1Q9Y6Y1 1673 aa16.94■□□□□ 0.3
CDK5RAP3-202ENST00000536708 CHRNA2Q15822 529 aa16.94■□□□□ 0.3
CDK5RAP3-202ENST00000536708 ERICH6Q7L0X2 663 aa16.94■□□□□ 0.3
CDK5RAP3-202ENST00000536708 CCDC136Q96JN2 1154 aa16.94■□□□□ 0.3
CDK5RAP3-202ENST00000536708 PLEKHF1Q96S99 279 aa16.94■□□□□ 0.3
CDK5RAP3-202ENST00000536708 RCAN3Q9UKA8 241 aa16.94■□□□□ 0.3
CDK5RAP3-202ENST00000536708 PRKAR2BP31323 418 aa16.93■□□□□ 0.3
CDK5RAP3-202ENST00000536708 IP6K1Q92551 441 aa16.93■□□□□ 0.3
CDK5RAP3-202ENST00000536708 RUNDC1Q96C34 613 aa16.93■□□□□ 0.3
CDK5RAP3-202ENST00000536708 TCP11L2Q8N4U5 519 aa16.92■□□□□ 0.3
CDK5RAP3-202ENST00000536708 NEUROD2Q15784 382 aa16.91■□□□□ 0.3
CDK5RAP3-202ENST00000536708 USHBP1Q8N6Y0 703 aa16.91■□□□□ 0.3
CDK5RAP3-202ENST00000536708 ABCC6O95255 1503 aa16.91■□□□□ 0.3
CDK5RAP3-202ENST00000536708 IGSF1Q8N6C5 1336 aa16.91■□□□□ 0.3
CDK5RAP3-202ENST00000536708 FAM208AQ9UK61 1670 aaKnown RBP16.91■□□□□ 0.3
CDK5RAP3-202ENST00000536708 SULT6B1Q6IMI4 303 aa16.91■□□□□ 0.3
CDK5RAP3-202ENST00000536708 LRRC59Q96AG4 307 aaKnown RBP16.91■□□□□ 0.3
CDK5RAP3-202ENST00000536708 EYA1Q99502 592 aa16.91■□□□□ 0.3
CDK5RAP3-202ENST00000536708 CPDO75976 1380 aa16.91■□□□□ 0.3
CDK5RAP3-202ENST00000536708 HAP1P54257 671 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP3-202ENST00000536708 PHACTR3Q96KR7 559 aa16.9■□□□□ 0.3
CDK5RAP3-202ENST00000536708 MAPK8IP3Q9UPT6 1336 aa16.89■□□□□ 0.29
CDK5RAP3-202ENST00000536708 PLCH1Q4KWH8 1693 aa16.89■□□□□ 0.29
CDK5RAP3-202ENST00000536708 KDRP35968 1356 aa16.89■□□□□ 0.29
CDK5RAP3-202ENST00000536708 FCHSD2O94868 740 aa16.88■□□□□ 0.29
CDK5RAP3-202ENST00000536708 ANKRD24Q8TF21 1146 aa16.88■□□□□ 0.29
CDK5RAP3-202ENST00000536708 ERBB3P21860 1342 aa16.88■□□□□ 0.29
CDK5RAP3-202ENST00000536708 CDCA7LQ96GN5 454 aa16.88■□□□□ 0.29
CDK5RAP3-202ENST00000536708 PRDM11Q9NQV5 511 aa16.88■□□□□ 0.29
CDK5RAP3-202ENST00000536708 ZNF521Q96K83 1311 aa16.87■□□□□ 0.29
CDK5RAP3-202ENST00000536708 NBPF6Q5VWK0 638 aa16.87■□□□□ 0.29
CDK5RAP3-202ENST00000536708 NBPF4Q96M43 638 aa16.87■□□□□ 0.29
CDK5RAP3-202ENST00000536708 COL14A1Q05707 1796 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP3-202ENST00000536708 COL5A2P05997 1499 aaPredicted RBP16.85■□□□□ 0.29
CDK5RAP3-202ENST00000536708 VIRMAQ69YN4 1812 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP3-202ENST00000536708 NCAPD2Q15021 1401 aa16.84■□□□□ 0.29
CDK5RAP3-202ENST00000536708 TMPOP42166 694 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP3-202ENST00000536708 WWC1Q8IX03 1113 aa16.83■□□□□ 0.28
CDK5RAP3-202ENST00000536708 EXOC6Q8TAG9 804 aa16.83■□□□□ 0.28
CDK5RAP3-202ENST00000536708 SPINK5Q9NQ38 1064 aaPredicted RBP16.83■□□□□ 0.28
CDK5RAP3-202ENST00000536708 NRAPQ86VF7 1730 aa16.82■□□□□ 0.28
CDK5RAP3-202ENST00000536708 FAM83GA6ND36 823 aa16.82■□□□□ 0.28
CDK5RAP3-202ENST00000536708 PHF23Q9BUL5 403 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-202ENST00000536708 TRIM35Q9UPQ4 493 aa16.81■□□□□ 0.28
CDK5RAP3-202ENST00000536708 NUTM2BA6NNL0 878 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-202ENST00000536708 NUTM2EB1AL46 878 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-202ENST00000536708 RIPK4P57078 832 aa16.8■□□□□ 0.28
CDK5RAP3-202ENST00000536708 NUTM2AQ8IVF1 878 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-202ENST00000536708 ADAMTS2O95450 1211 aa16.8■□□□□ 0.28
CDK5RAP3-202ENST00000536708 NFE2L2Q16236 605 aa16.8■□□□□ 0.28
CDK5RAP3-202ENST00000536708 PNNQ9H307 717 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-202ENST00000536708 NLRP2Q9NX02 1062 aa16.8■□□□□ 0.28
CDK5RAP3-202ENST00000536708 MEGF6O75095 1541 aa16.8■□□□□ 0.28
CDK5RAP3-202ENST00000536708 NEFMP07197 916 aa16.79■□□□□ 0.28
CDK5RAP3-202ENST00000536708 CSB-PGBD3P0DP91 1061 aa16.79■□□□□ 0.28
CDK5RAP3-202ENST00000536708 THUMPD2Q9BTF0 503 aaKnown RBP16.79■□□□□ 0.28
CDK5RAP3-202ENST00000536708 LRP6O75581 1613 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms