RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 C11orf95C9JLR9 678 aaPredicted RBP18.33■□□□□ 0.52
PRKDC-206ENST00000536429 FBLN1P23142 703 aa18.33■□□□□ 0.52
PRKDC-206ENST00000536429 COL18A1P39060 1754 aa18.32■□□□□ 0.52
PRKDC-206ENST00000536429 USP54Q70EL1 1684 aa18.32■□□□□ 0.52
PRKDC-206ENST00000536429 MYOM1P52179 1685 aa18.31■□□□□ 0.52
PRKDC-206ENST00000536429 FYB1O15117 783 aa18.31■□□□□ 0.52
PRKDC-206ENST00000536429 KRT27Q7Z3Y8 459 aa18.31■□□□□ 0.52
PRKDC-206ENST00000536429 GGNBP2Q9H3C7 697 aa18.31■□□□□ 0.52
PRKDC-206ENST00000536429 FAM182BQ5T319 152 aa18.3■□□□□ 0.52
PRKDC-206ENST00000536429 TCP11L2Q8N4U5 519 aa18.3■□□□□ 0.52
PRKDC-206ENST00000536429 COG3Q96JB2 828 aa18.3■□□□□ 0.52
PRKDC-206ENST00000536429 THSD7AQ9UPZ6 1657 aa18.3■□□□□ 0.52
PRKDC-206ENST00000536429 BRWD3Q6RI45 1802 aa18.3■□□□□ 0.52
PRKDC-206ENST00000536429 BARGINQ6ZT62 677 aa18.29■□□□□ 0.52
PRKDC-206ENST00000536429 CRB1P82279 1406 aa18.29■□□□□ 0.52
PRKDC-206ENST00000536429 NSD3Q9BZ95 1437 aa18.29■□□□□ 0.52
PRKDC-206ENST00000536429 WDR17Q8IZU2 1322 aa18.28■□□□□ 0.52
PRKDC-206ENST00000536429 TOM1L2Q6ZVM7 507 aa18.28■□□□□ 0.52
PRKDC-206ENST00000536429 MAP3K19Q56UN5 1328 aa18.25■□□□□ 0.51
PRKDC-206ENST00000536429 CSB-PGBD3P0DP91 1061 aa18.25■□□□□ 0.51
PRKDC-206ENST00000536429 THRAP3Q9Y2W1 955 aaKnown RBP18.25■□□□□ 0.51
PRKDC-206ENST00000536429 ERBB3P21860 1342 aa18.23■□□□□ 0.51
PRKDC-206ENST00000536429 RRS1Q15050 365 aaKnown RBP18.23■□□□□ 0.51
PRKDC-206ENST00000536429 PANK3Q9H999 370 aa18.23■□□□□ 0.51
PRKDC-206ENST00000536429 ABCC6O95255 1503 aa18.23■□□□□ 0.51
PRKDC-206ENST00000536429 RGPD5Q99666 1765 aa18.22■□□□□ 0.51
PRKDC-206ENST00000536429 ANKRD24Q8TF21 1146 aa18.22■□□□□ 0.51
PRKDC-206ENST00000536429 IP6K1Q92551 441 aa18.22■□□□□ 0.51
PRKDC-206ENST00000536429 CARD10Q9BWT7 1032 aa18.22■□□□□ 0.51
PRKDC-206ENST00000536429 KIF7Q2M1P5 1343 aa18.22■□□□□ 0.51
PRKDC-206ENST00000536429 HOXC9P31274 260 aa18.2■□□□□ 0.5
PRKDC-206ENST00000536429 LTV1Q96GA3 475 aaPredicted RBP18.2■□□□□ 0.5
PRKDC-206ENST00000536429 BLMP54132 1417 aaPredicted RBP18.2■□□□□ 0.5
PRKDC-206ENST00000536429 LTN1O94822 1766 aa18.19■□□□□ 0.5
PRKDC-206ENST00000536429 DISP2A7MBM2 1401 aa18.19■□□□□ 0.5
PRKDC-206ENST00000536429 AMPHP49418 695 aa18.19■□□□□ 0.5
PRKDC-206ENST00000536429 PDE3BQ13370 1112 aa18.19■□□□□ 0.5
PRKDC-206ENST00000536429 DEFB132Q7Z7B7 95 aa18.19■□□□□ 0.5
PRKDC-206ENST00000536429 NLRP2Q9NX02 1062 aa18.19■□□□□ 0.5
PRKDC-206ENST00000536429 CCDC125Q86Z20 511 aa18.18■□□□□ 0.5
PRKDC-206ENST00000536429 CGNL1Q0VF96 1302 aa18.18■□□□□ 0.5
PRKDC-206ENST00000536429 KIF20BQ96Q89 1820 aa18.16■□□□□ 0.5
PRKDC-206ENST00000536429 CCDC7Q96M83 1385 aa18.16■□□□□ 0.5
PRKDC-206ENST00000536429 DDB1Q16531 1140 aa18.15■□□□□ 0.5
PRKDC-206ENST00000536429 EMILIN1Q9Y6C2 1016 aa18.15■□□□□ 0.5
PRKDC-206ENST00000536429 PARP4Q9UKK3 1724 aaKnown RBP18.15■□□□□ 0.5
PRKDC-206ENST00000536429 LRRC37A3O60309 1634 aa18.14■□□□□ 0.49
PRKDC-206ENST00000536429 TRIM37O94972 964 aa18.14■□□□□ 0.49
PRKDC-206ENST00000536429 HSP90AB2PQ58FF8 381 aa18.14■□□□□ 0.49
PRKDC-206ENST00000536429 FAM196AQ6ZSG2 479 aa18.14■□□□□ 0.49
PRKDC-206ENST00000536429 RTL1A6NKG5 1358 aa18.14■□□□□ 0.49
PRKDC-206ENST00000536429 MARCH10Q8NA82 808 aaPredicted RBP18.13■□□□□ 0.49
PRKDC-206ENST00000536429 PEAK1Q9H792 1746 aa18.12■□□□□ 0.49
PRKDC-206ENST00000536429 TNNT2P45379 298 aaPredicted RBP18.12■□□□□ 0.49
PRKDC-206ENST00000536429 SF3B2Q13435 895 aaKnown RBP18.12■□□□□ 0.49
PRKDC-206ENST00000536429 CDCA7Q9BWT1 371 aaPredicted RBP18.12■□□□□ 0.49
PRKDC-206ENST00000536429 WASHC2AQ641Q2 1341 aa18.12■□□□□ 0.49
PRKDC-206ENST00000536429 WNK3Q9BYP7 1800 aa18.1■□□□□ 0.49
PRKDC-206ENST00000536429 IL2RBP14784 551 aa18.1■□□□□ 0.49
PRKDC-206ENST00000536429 NBPF6Q5VWK0 638 aa18.1■□□□□ 0.49
PRKDC-206ENST00000536429 NBPF4Q96M43 638 aa18.1■□□□□ 0.49
PRKDC-206ENST00000536429 INSRP06213 1382 aa18.09■□□□□ 0.49
PRKDC-206ENST00000536429 FLT4P35916 1363 aa18.09■□□□□ 0.49
PRKDC-206ENST00000536429 EXOC5O00471 708 aa18.09■□□□□ 0.49
PRKDC-206ENST00000536429 PPM1GO15355 546 aaPredicted RBP18.09■□□□□ 0.49
PRKDC-206ENST00000536429 EN1Q05925 392 aaPredicted RBP18.09■□□□□ 0.49
PRKDC-206ENST00000536429 PTF1AQ7RTS3 328 aa18.09■□□□□ 0.49
PRKDC-206ENST00000536429 USHBP1Q8N6Y0 703 aa18.09■□□□□ 0.49
PRKDC-206ENST00000536429 POLKQ9UBT6 870 aa18.09■□□□□ 0.49
PRKDC-206ENST00000536429 SRCAPQ6ZRS2 3230 aa18.09■□□□□ 0.49
PRKDC-206ENST00000536429 OVOS2A0A0G2JMS6 1433 aa18.08■□□□□ 0.49
PRKDC-206ENST00000536429 TNS2Q63HR2 1409 aa18.08■□□□□ 0.49
PRKDC-206ENST00000536429 AMER1Q5JTC6 1135 aaPredicted RBP18.08■□□□□ 0.48
PRKDC-206ENST00000536429 KNSTRNQ9Y448 316 aa18.08■□□□□ 0.48
PRKDC-206ENST00000536429 BAG6P46379 1132 aa18.07■□□□□ 0.48
PRKDC-206ENST00000536429 KIF24Q5T7B8 1368 aa18.06■□□□□ 0.48
PRKDC-206ENST00000536429 PER1O15534 1290 aaPredicted RBP18.06■□□□□ 0.48
PRKDC-206ENST00000536429 NSD2O96028 1365 aa18.05■□□□□ 0.48
PRKDC-206ENST00000536429 MEGF6O75095 1541 aa18.05■□□□□ 0.48
PRKDC-206ENST00000536429 APBA3O96018 575 aa18.05■□□□□ 0.48
PRKDC-206ENST00000536429 EZH2Q15910 746 aaKnown RBP18.05■□□□□ 0.48
PRKDC-206ENST00000536429 TNS1Q9HBL0 1735 aaKnown RBP18.05■□□□□ 0.48
PRKDC-206ENST00000536429 FAM208AQ9UK61 1670 aaKnown RBP18.05■□□□□ 0.48
PRKDC-206ENST00000536429 MORC1Q86VD1 984 aa18.04■□□□□ 0.48
PRKDC-206ENST00000536429 CAMKK2Q96RR4 588 aa18.04■□□□□ 0.48
PRKDC-206ENST00000536429 SMG6Q86US8 1419 aaKnown RBP18.04■□□□□ 0.48
PRKDC-206ENST00000536429 RGPD1P0DJD0 1748 aa18.03■□□□□ 0.48
PRKDC-206ENST00000536429 RGPD2P0DJD1 1756 aa18.03■□□□□ 0.48
PRKDC-206ENST00000536429 BCL9O00512 1426 aa18.02■□□□□ 0.48
PRKDC-206ENST00000536429 ANKRD26Q9UPS8 1709 aa18.02■□□□□ 0.48
PRKDC-206ENST00000536429 KCNQ2O43526 872 aa18.01■□□□□ 0.47
PRKDC-206ENST00000536429 DDX54Q8TDD1 881 aaKnown RBP18.01■□□□□ 0.47
PRKDC-206ENST00000536429 ACSBG1Q96GR2 724 aa18.01■□□□□ 0.47
PRKDC-206ENST00000536429 EIF4A2Q14240 407 aaKnown RBP18■□□□□ 0.47
PRKDC-206ENST00000536429 CC2D1BQ5T0F9 858 aaKnown RBP18■□□□□ 0.47
PRKDC-206ENST00000536429 EYA1Q99502 592 aa18■□□□□ 0.47
PRKDC-206ENST00000536429 BCL11BQ9C0K0 894 aaPredicted RBP18■□□□□ 0.47
PRKDC-206ENST00000536429 CNGB1Q14028 1251 aaPredicted RBP17.99■□□□□ 0.47
PRKDC-206ENST00000536429 ZCRB1Q8TBF4 217 aaKnown RBP17.98■□□□□ 0.47
PRKDC-206ENST00000536429 MAP2P11137 1827 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms