RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 ROBO1Q9Y6N7 1651 aa27.55■■■□□ 2
PDXDC1-205ENST00000535621 NHSL1Q5SYE7 1610 aa27.55■■■□□ 2
PDXDC1-205ENST00000535621 CCDC27Q2M243 656 aa27.55■■■□□ 2
PDXDC1-205ENST00000535621 HSP90AB2PQ58FF8 381 aa27.55■■■□□ 2
PDXDC1-205ENST00000535621 RCAN3Q9UKA8 241 aa27.55■■■□□ 2
PDXDC1-205ENST00000535621 MED1Q15648 1581 aaPredicted RBP27.54■■■□□ 2
PDXDC1-205ENST00000535621 PNNQ9H307 717 aaKnown RBP27.54■■■□□ 2
PDXDC1-205ENST00000535621 SPINK5Q9NQ38 1064 aaPredicted RBP27.53■■■□□ 2
PDXDC1-205ENST00000535621 TNS3Q68CZ2 1445 aa27.53■■■□□ 2
PDXDC1-205ENST00000535621 SBNO1A3KN83 1393 aa27.53■■■□□ 2
PDXDC1-205ENST00000535621 RSPH6AQ9H0K4 717 aa27.53■■■□□ 2
PDXDC1-205ENST00000535621 SLIT3O75094 1523 aa27.53■■■□□ 2
PDXDC1-205ENST00000535621 MAPK8IP3Q9UPT6 1336 aa27.51■■□□□ 1.99
PDXDC1-205ENST00000535621 E9PSI1 815 aa27.51■■□□□ 1.99
PDXDC1-205ENST00000535621 SPATA31A3Q5VYP0 1347 aa27.51■■□□□ 1.99
PDXDC1-205ENST00000535621 CABLES1Q8TDN4 633 aa27.5■■□□□ 1.99
PDXDC1-205ENST00000535621 USP19O94966 1318 aa27.5■■□□□ 1.99
PDXDC1-205ENST00000535621 SOS2Q07890 1332 aaPredicted RBP27.49■■□□□ 1.99
PDXDC1-205ENST00000535621 CRYBG1Q9Y4K1 1723 aa27.49■■□□□ 1.99
PDXDC1-205ENST00000535621 ZBTB7CA1YPR0 619 aa27.49■■□□□ 1.99
PDXDC1-205ENST00000535621 TMPOP42166 694 aaKnown RBP27.49■■□□□ 1.99
PDXDC1-205ENST00000535621 PHRF1Q9P1Y6 1649 aaKnown RBP27.49■■□□□ 1.99
PDXDC1-205ENST00000535621 GCP02774 474 aa27.48■■□□□ 1.99
PDXDC1-205ENST00000535621 AMPHP49418 695 aa27.48■■□□□ 1.99
PDXDC1-205ENST00000535621 EIF4A2Q14240 407 aaKnown RBP27.48■■□□□ 1.99
PDXDC1-205ENST00000535621 PRKAR2BP31323 418 aa27.48■■□□□ 1.99
PDXDC1-205ENST00000535621 ERICH6BQ5W0A0 696 aa27.48■■□□□ 1.99
PDXDC1-205ENST00000535621 HMOX1P09601 288 aa27.47■■□□□ 1.99
PDXDC1-205ENST00000535621 WDR63Q8IWG1 891 aa27.47■■□□□ 1.99
PDXDC1-205ENST00000535621 FLT4P35916 1363 aa27.47■■□□□ 1.99
PDXDC1-205ENST00000535621 HOXC9P31274 260 aa27.45■■□□□ 1.99
PDXDC1-205ENST00000535621 KCNH5Q8NCM2 988 aa27.43■■□□□ 1.98
PDXDC1-205ENST00000535621 RGPD1P0DJD0 1748 aa27.43■■□□□ 1.98
PDXDC1-205ENST00000535621 KIF24Q5T7B8 1368 aa27.43■■□□□ 1.98
PDXDC1-205ENST00000535621 RRP1P56182 461 aaKnown RBP27.43■■□□□ 1.98
PDXDC1-205ENST00000535621 TRIM35Q9UPQ4 493 aa27.43■■□□□ 1.98
PDXDC1-205ENST00000535621 RGPD5Q99666 1765 aa27.43■■□□□ 1.98
PDXDC1-205ENST00000535621 ZC3H6P61129 1189 aaKnown RBP27.41■■□□□ 1.98
PDXDC1-205ENST00000535621 NEFMP07197 916 aa27.41■■□□□ 1.98
PDXDC1-205ENST00000535621 PHACTR3Q96KR7 559 aa27.41■■□□□ 1.98
PDXDC1-205ENST00000535621 RIPK4P57078 832 aa27.4■■□□□ 1.98
PDXDC1-205ENST00000535621 AEBP1Q8IUX7 1158 aa27.4■■□□□ 1.98
PDXDC1-205ENST00000535621 LTV1Q96GA3 475 aaPredicted RBP27.4■■□□□ 1.98
PDXDC1-205ENST00000535621 ARHGEF10O15013 1369 aa27.4■■□□□ 1.98
PDXDC1-205ENST00000535621 ARHGEF25Q86VW2 580 aa27.4■■□□□ 1.98
PDXDC1-205ENST00000535621 RGPD2P0DJD1 1756 aa27.39■■□□□ 1.98
PDXDC1-205ENST00000535621 PIP4K2BP78356 416 aa27.39■■□□□ 1.98
PDXDC1-205ENST00000535621 ABCA3Q99758 1704 aa27.38■■□□□ 1.97
PDXDC1-205ENST00000535621 AHDC1Q5TGY3 1603 aaPredicted RBP27.37■■□□□ 1.97
PDXDC1-205ENST00000535621 IP6K1Q92551 441 aa27.36■■□□□ 1.97
PDXDC1-205ENST00000535621 RTL1A6NKG5 1358 aa27.36■■□□□ 1.97
PDXDC1-205ENST00000535621 SULT6B1Q6IMI4 303 aa27.36■■□□□ 1.97
PDXDC1-205ENST00000535621 NFE2L2Q16236 605 aa27.35■■□□□ 1.97
PDXDC1-205ENST00000535621 AXIN2Q9Y2T1 843 aa27.34■■□□□ 1.97
PDXDC1-205ENST00000535621 UBAP1LF5GYI3 381 aa27.33■■□□□ 1.97
PDXDC1-205ENST00000535621 PHLPP1O60346 1717 aa27.33■■□□□ 1.97
PDXDC1-205ENST00000535621 EYA1Q99502 592 aa27.33■■□□□ 1.96
PDXDC1-205ENST00000535621 COL18A1P39060 1754 aa27.32■■□□□ 1.96
PDXDC1-205ENST00000535621 TOM1O60784 492 aa27.32■■□□□ 1.96
PDXDC1-205ENST00000535621 MYH16Q9H6N6 1097 aa27.32■■□□□ 1.96
PDXDC1-205ENST00000535621 CHRNA2Q15822 529 aa27.31■■□□□ 1.96
PDXDC1-205ENST00000535621 PPP4R2Q9NY27 417 aa27.31■■□□□ 1.96
PDXDC1-205ENST00000535621 IL16Q14005 1332 aa27.31■■□□□ 1.96
PDXDC1-205ENST00000535621 KIAA0232Q92628 1395 aa27.3■■□□□ 1.96
PDXDC1-205ENST00000535621 IGSF1Q8N6C5 1336 aa27.29■■□□□ 1.96
PDXDC1-205ENST00000535621 COL16A1Q07092 1604 aaPredicted RBP27.29■■□□□ 1.96
PDXDC1-205ENST00000535621 KDRP35968 1356 aa27.29■■□□□ 1.96
PDXDC1-205ENST00000535621 USHBP1Q8N6Y0 703 aa27.29■■□□□ 1.96
PDXDC1-205ENST00000535621 DLG5Q8TDM6 1919 aa27.28■■□□□ 1.96
PDXDC1-205ENST00000535621 PLIN1O60240 522 aa27.28■■□□□ 1.96
PDXDC1-205ENST00000535621 LRRC59Q96AG4 307 aaKnown RBP27.28■■□□□ 1.96
PDXDC1-205ENST00000535621 CERKQ8TCT0 537 aa27.27■■□□□ 1.96
PDXDC1-205ENST00000535621 FANCIQ9NVI1 1328 aa27.25■■□□□ 1.95
PDXDC1-205ENST00000535621 NBPF6Q5VWK0 638 aa27.24■■□□□ 1.95
PDXDC1-205ENST00000535621 NBPF4Q96M43 638 aa27.24■■□□□ 1.95
PDXDC1-205ENST00000535621 ANKRD24Q8TF21 1146 aa27.24■■□□□ 1.95
PDXDC1-205ENST00000535621 HAP1P54257 671 aaPredicted RBP27.23■■□□□ 1.95
PDXDC1-205ENST00000535621 LMOD3Q0VAK6 560 aa27.23■■□□□ 1.95
PDXDC1-205ENST00000535621 TSR2Q969E8 191 aaKnown RBP27.23■■□□□ 1.95
PDXDC1-205ENST00000535621 CPDO75976 1380 aa27.22■■□□□ 1.95
PDXDC1-205ENST00000535621 BCAR3O75815 825 aa27.21■■□□□ 1.95
PDXDC1-205ENST00000535621 COL22A1Q8NFW1 1626 aaPredicted RBP27.2■■□□□ 1.94
PDXDC1-205ENST00000535621 CALD1Q05682 793 aaKnown RBP27.19■■□□□ 1.94
PDXDC1-205ENST00000535621 THUMPD2Q9BTF0 503 aaKnown RBP27.19■■□□□ 1.94
PDXDC1-205ENST00000535621 PRDM11Q9NQV5 511 aa27.19■■□□□ 1.94
PDXDC1-205ENST00000535621 ERBB3P21860 1342 aa27.19■■□□□ 1.94
PDXDC1-205ENST00000535621 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.18■■□□□ 1.94
PDXDC1-205ENST00000535621 EXOC6Q8TAG9 804 aa27.17■■□□□ 1.94
PDXDC1-205ENST00000535621 LMO7Q8WWI1 1683 aa27.17■■□□□ 1.94
PDXDC1-205ENST00000535621 CAMTA1Q9Y6Y1 1673 aa27.17■■□□□ 1.94
PDXDC1-205ENST00000535621 FAM83GA6ND36 823 aa27.16■■□□□ 1.94
PDXDC1-205ENST00000535621 CT47B1P0C2W7 299 aaPredicted RBP27.16■■□□□ 1.94
PDXDC1-205ENST00000535621 RARSP54136 660 aaKnown RBP27.16■■□□□ 1.94
PDXDC1-205ENST00000535621 EXOSC9Q06265 439 aaKnown RBP27.16■■□□□ 1.94
PDXDC1-205ENST00000535621 C20orf194Q5TEA3 1177 aa27.16■■□□□ 1.94
PDXDC1-205ENST00000535621 B4GALNT3Q6L9W6 998 aa27.16■■□□□ 1.94
PDXDC1-205ENST00000535621 IFT57Q9NWB7 429 aa27.14■■□□□ 1.94
PDXDC1-205ENST00000535621 MTHFSDQ2M296 383 aaKnown RBP27.14■■□□□ 1.93
PDXDC1-205ENST00000535621 ABCC6O95255 1503 aa27.13■■□□□ 1.93
PDXDC1-205ENST00000535621 ZNF853P0CG23 659 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms