RNA–Protein interactions for RNA: ENST00000535120.1

MRE11-205, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 2

Gene MRE11, Length 234 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-205ENST00000535120 TXNRD1Q16881 649 aa10.42□□□□□ -0.74
MRE11-205ENST00000535120 PROM2Q8N271 834 aa10.42□□□□□ -0.74
MRE11-205ENST00000535120 USP6P35125 1406 aa10.41□□□□□ -0.74
MRE11-205ENST00000535120 TOPAZ1Q8N9V7 1692 aa10.41□□□□□ -0.74
MRE11-205ENST00000535120 EVC2Q86UK5 1308 aa10.41□□□□□ -0.74
MRE11-205ENST00000535120 KLHL34Q8N239 644 aa10.41□□□□□ -0.74
MRE11-205ENST00000535120 FHDC1Q9C0D6 1143 aaPredicted RBP10.41□□□□□ -0.74
MRE11-205ENST00000535120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.4□□□□□ -0.74
MRE11-205ENST00000535120 TTC21BQ7Z4L5 1316 aa10.39□□□□□ -0.75
MRE11-205ENST00000535120 PTGER2P43116 358 aa10.39□□□□□ -0.75
MRE11-205ENST00000535120 NEUROD1Q13562 356 aa10.39□□□□□ -0.75
MRE11-205ENST00000535120 SLC15A2Q16348 729 aa10.39□□□□□ -0.75
MRE11-205ENST00000535120 ARHGEF25Q86VW2 580 aa10.39□□□□□ -0.75
MRE11-205ENST00000535120 PELP1Q8IZL8 1130 aaKnown RBP10.39□□□□□ -0.75
MRE11-205ENST00000535120 ZNF784Q8NCA9 323 aaPredicted RBP10.39□□□□□ -0.75
MRE11-205ENST00000535120 KCNH5Q8NCM2 988 aa10.39□□□□□ -0.75
MRE11-205ENST00000535120 CDCA7Q9BWT1 371 aaPredicted RBP10.39□□□□□ -0.75
MRE11-205ENST00000535120 CARD10Q9BWT7 1032 aa10.39□□□□□ -0.75
MRE11-205ENST00000535120 NLRP2Q9NX02 1062 aa10.39□□□□□ -0.75
MRE11-205ENST00000535120 LRRC37A3O60309 1634 aa10.38□□□□□ -0.75
MRE11-205ENST00000535120 SYT17Q9BSW7 474 aa10.38□□□□□ -0.75
MRE11-205ENST00000535120 CPSF1Q10570 1443 aaKnown RBP10.38□□□□□ -0.75
MRE11-205ENST00000535120 PARP4Q9UKK3 1724 aaKnown RBP10.38□□□□□ -0.75
MRE11-205ENST00000535120 BRD4O60885 1362 aaPredicted RBP10.38□□□□□ -0.75
MRE11-205ENST00000535120 SENP3-EIF4A1A0A087X0R7 540 aa10.37□□□□□ -0.75
MRE11-205ENST00000535120 TMC1Q8TDI8 760 aa10.37□□□□□ -0.75
MRE11-205ENST00000535120 L3MBTL2Q969R5 705 aa10.37□□□□□ -0.75
MRE11-205ENST00000535120 ZNF692Q9BU19 519 aaPredicted RBP10.37□□□□□ -0.75
MRE11-205ENST00000535120 GPR162Q16538 588 aa10.36□□□□□ -0.75
MRE11-205ENST00000535120 ARXQ96QS3 562 aa10.36□□□□□ -0.75
MRE11-205ENST00000535120 SIN3AQ96ST3 1273 aa10.36□□□□□ -0.75
MRE11-205ENST00000535120 MTFR1LQ9H019 292 aa10.36□□□□□ -0.75
MRE11-205ENST00000535120 SLIT3O75094 1523 aa10.36□□□□□ -0.75
MRE11-205ENST00000535120 KTN1Q86UP2 1357 aaKnown RBP10.36□□□□□ -0.75
MRE11-205ENST00000535120 PEAK1Q9H792 1746 aa10.36□□□□□ -0.75
MRE11-205ENST00000535120 NME9Q86XW9 330 aa10.35□□□□□ -0.75
MRE11-205ENST00000535120 DDX54Q8TDD1 881 aaKnown RBP10.35□□□□□ -0.75
MRE11-205ENST00000535120 LTV1Q96GA3 475 aaPredicted RBP10.35□□□□□ -0.75
MRE11-205ENST00000535120 ROCK2O75116 1388 aaKnown RBP10.35□□□□□ -0.75
MRE11-205ENST00000535120 MYOM1P52179 1685 aa10.34□□□□□ -0.75
MRE11-205ENST00000535120 QRICH2Q9H0J4 1663 aa10.34□□□□□ -0.75
MRE11-205ENST00000535120 TTC21AQ8NDW8 1320 aa10.34□□□□□ -0.75
MRE11-205ENST00000535120 KCNQ4P56696 695 aa10.34□□□□□ -0.75
MRE11-205ENST00000535120 SYTL4Q96C24 671 aaPredicted RBP10.34□□□□□ -0.75
MRE11-205ENST00000535120 CCDC7Q96M83 1385 aa10.34□□□□□ -0.75
MRE11-205ENST00000535120 PIK3C2AO00443 1686 aa10.34□□□□□ -0.75
MRE11-205ENST00000535120 IL2RBP14784 551 aa10.33□□□□□ -0.76
MRE11-205ENST00000535120 ZNF827Q17R98 1081 aa10.33□□□□□ -0.76
MRE11-205ENST00000535120 ANKRD24Q8TF21 1146 aa10.33□□□□□ -0.76
MRE11-205ENST00000535120 KIAA1210Q9ULL0 1709 aa10.33□□□□□ -0.76
MRE11-205ENST00000535120 CASZ1Q86V15 1759 aa10.32□□□□□ -0.76
MRE11-205ENST00000535120 MSH5O43196 834 aa10.32□□□□□ -0.76
MRE11-205ENST00000535120 TNS2Q63HR2 1409 aa10.32□□□□□ -0.76
MRE11-205ENST00000535120 SBF2Q86WG5 1849 aa10.31□□□□□ -0.76
MRE11-205ENST00000535120 C1QTNF8P60827 252 aa10.31□□□□□ -0.76
MRE11-205ENST00000535120 LRRC4BQ9NT99 713 aa10.31□□□□□ -0.76
MRE11-205ENST00000535120 TFCP2L1Q9NZI6 479 aa10.31□□□□□ -0.76
MRE11-205ENST00000535120 COL18A1P39060 1754 aa10.31□□□□□ -0.76
MRE11-205ENST00000535120 BCL9O00512 1426 aa10.31□□□□□ -0.76
MRE11-205ENST00000535120 ERBB3P21860 1342 aa10.31□□□□□ -0.76
MRE11-205ENST00000535120 POLD1P28340 1107 aa10.3□□□□□ -0.76
MRE11-205ENST00000535120 HDGFL2Q7Z4V5 671 aaPredicted RBP10.3□□□□□ -0.76
MRE11-205ENST00000535120 SGIP1Q9BQI5 828 aa10.3□□□□□ -0.76
MRE11-205ENST00000535120 SLC12A5Q9H2X9 1139 aa10.3□□□□□ -0.76
MRE11-205ENST00000535120 RGPD3A6NKT7 1758 aaPredicted RBP10.29□□□□□ -0.76
MRE11-205ENST00000535120 AKAP12Q02952 1782 aa10.29□□□□□ -0.76
MRE11-205ENST00000535120 RGPD4Q7Z3J3 1758 aa10.29□□□□□ -0.76
MRE11-205ENST00000535120 RGPD5Q99666 1765 aa10.29□□□□□ -0.76
MRE11-205ENST00000535120 NFAT5O94916 1531 aa10.28□□□□□ -0.76
MRE11-205ENST00000535120 PRIM1P49642 420 aaKnown RBP10.28□□□□□ -0.76
MRE11-205ENST00000535120 CARD11Q9BXL7 1154 aa10.28□□□□□ -0.76
MRE11-205ENST00000535120 TRPM1Q7Z4N2 1603 aa10.28□□□□□ -0.76
MRE11-205ENST00000535120 GIGYF1O75420 1035 aaPredicted RBP10.27□□□□□ -0.77
MRE11-205ENST00000535120 FBLN1P23142 703 aa10.27□□□□□ -0.77
MRE11-205ENST00000535120 MSL1Q68DK7 614 aa10.27□□□□□ -0.77
MRE11-205ENST00000535120 NLGN2Q8NFZ4 835 aa10.27□□□□□ -0.77
MRE11-205ENST00000535120 UTRNP46939 3433 aa10.27□□□□□ -0.77
MRE11-205ENST00000535120 WNK3Q9BYP7 1800 aa10.26□□□□□ -0.77
MRE11-205ENST00000535120 AMPHP49418 695 aa10.26□□□□□ -0.77
MRE11-205ENST00000535120 AKT1S1Q96B36 256 aa10.26□□□□□ -0.77
MRE11-205ENST00000535120 TERF2IPQ9NYB0 399 aa10.26□□□□□ -0.77
MRE11-205ENST00000535120 SBNO2Q9Y2G9 1366 aa10.26□□□□□ -0.77
MRE11-205ENST00000535120 SLC27A3Q5K4L6 730 aa10.25□□□□□ -0.77
MRE11-205ENST00000535120 KAT6BQ8WYB5 2073 aa10.25□□□□□ -0.77
MRE11-205ENST00000535120 PNPLA7Q6ZV29 1317 aa10.25□□□□□ -0.77
MRE11-205ENST00000535120 USP31Q70CQ4 1352 aa10.25□□□□□ -0.77
MRE11-205ENST00000535120 NHSQ6T4R5 1651 aa10.25□□□□□ -0.77
MRE11-205ENST00000535120 ABCC6O95255 1503 aa10.24□□□□□ -0.77
MRE11-205ENST00000535120 SLC16A10Q8TF71 515 aa10.24□□□□□ -0.77
MRE11-205ENST00000535120 IP6K1Q92551 441 aa10.24□□□□□ -0.77
MRE11-205ENST00000535120 CCNL1Q9UK58 526 aaPredicted RBP10.24□□□□□ -0.77
MRE11-205ENST00000535120 WWC3Q9ULE0 1092 aa10.24□□□□□ -0.77
MRE11-205ENST00000535120 USHBP1Q8N6Y0 703 aa10.23□□□□□ -0.77
MRE11-205ENST00000535120 ZCRB1Q8TBF4 217 aaKnown RBP10.23□□□□□ -0.77
MRE11-205ENST00000535120 ZNF526Q8TF50 670 aaPredicted RBP10.23□□□□□ -0.77
MRE11-205ENST00000535120 COG3Q96JB2 828 aa10.23□□□□□ -0.77
MRE11-205ENST00000535120 BTAF1O14981 1849 aa10.22□□□□□ -0.77
MRE11-205ENST00000535120 YBX3P16989 372 aaKnown RBP eCLIP10.22□□□□□ -0.77
MRE11-205ENST00000535120 MAP3K19Q56UN5 1328 aa10.22□□□□□ -0.77
MRE11-205ENST00000535120 A0A1W2PP64 1363 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms