RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 MCCD1P59942 119 aaPredicted RBP8.61□□□□□ -1.03
ITGB1-219ENST00000534049 TRIM47Q96LD4 638 aa8.61□□□□□ -1.03
ITGB1-219ENST00000534049 KLF16Q9BXK1 252 aaPredicted RBP8.61□□□□□ -1.03
ITGB1-219ENST00000534049 PGPEP1Q9NXJ5 209 aa8.61□□□□□ -1.03
ITGB1-219ENST00000534049 DACH1Q9UI36 760 aa8.61□□□□□ -1.03
ITGB1-219ENST00000534049 SCARF1Q14162 830 aa8.6□□□□□ -1.03
ITGB1-219ENST00000534049 DZIP3Q86Y13 1208 aaKnown RBP8.6□□□□□ -1.03
ITGB1-219ENST00000534049 CCDC125Q86Z20 511 aa8.6□□□□□ -1.03
ITGB1-219ENST00000534049 MTMR14Q8NCE2 650 aa8.6□□□□□ -1.03
ITGB1-219ENST00000534049 KCTD15Q96SI1 283 aaPredicted RBP8.6□□□□□ -1.03
ITGB1-219ENST00000534049 UPP2O95045 317 aa8.59□□□□□ -1.03
ITGB1-219ENST00000534049 ZIC2O95409 532 aaPredicted RBP8.59□□□□□ -1.03
ITGB1-219ENST00000534049 NR3C2P08235 984 aa8.58□□□□□ -1.04
ITGB1-219ENST00000534049 SEPT12Q8IYM1 358 aa8.58□□□□□ -1.04
ITGB1-219ENST00000534049 OCSTAMPQ9BR26 566 aa8.58□□□□□ -1.04
ITGB1-219ENST00000534049 POTECB2RU33 542 aa8.57□□□□□ -1.04
ITGB1-219ENST00000534049 MRPL14Q6P1L8 145 aaKnown RBP8.57□□□□□ -1.04
ITGB1-219ENST00000534049 ITPKCQ96DU7 683 aa8.57□□□□□ -1.04
ITGB1-219ENST00000534049 NR1H3Q13133 447 aa8.56□□□□□ -1.04
ITGB1-219ENST00000534049 TRIM46Q7Z4K8 759 aa8.56□□□□□ -1.04
ITGB1-219ENST00000534049 BMP1P13497 986 aa8.55□□□□□ -1.04
ITGB1-219ENST00000534049 MEIOBQ8N635 442 aa8.55□□□□□ -1.04
ITGB1-219ENST00000534049 SNRKQ9NRH2 765 aa8.55□□□□□ -1.04
ITGB1-219ENST00000534049 FBXO45P0C2W1 286 aa8.54□□□□□ -1.04
ITGB1-219ENST00000534049 INTS6LQ5JSJ4 861 aaKnown RBP8.54□□□□□ -1.04
ITGB1-219ENST00000534049 PPP1R26Q5T8A7 1209 aaPredicted RBP8.54□□□□□ -1.04
ITGB1-219ENST00000534049 TSEN34Q9BSV6 310 aaKnown RBP8.54□□□□□ -1.04
ITGB1-219ENST00000534049 ZFAND3Q9H8U3 227 aa8.54□□□□□ -1.04
ITGB1-219ENST00000534049 ESPNB1AK53 854 aa8.53□□□□□ -1.04
ITGB1-219ENST00000534049 RNF20Q5VTR2 975 aa8.53□□□□□ -1.04
ITGB1-219ENST00000534049 PCDHB9Q9Y5E1 797 aa8.53□□□□□ -1.04
ITGB1-219ENST00000534049 LINC00528Q8N1L1 170 aa8.52□□□□□ -1.05
ITGB1-219ENST00000534049 ZNF775Q96BV0 537 aaPredicted RBP8.52□□□□□ -1.05
ITGB1-219ENST00000534049 ZFP42Q96MM3 310 aa8.52□□□□□ -1.05
ITGB1-219ENST00000534049 Q6ZVU0 165 aa8.51□□□□□ -1.05
ITGB1-219ENST00000534049 SNRPBP14678 240 aaKnown RBP8.5□□□□□ -1.05
ITGB1-219ENST00000534049 TMEM132AQ24JP5 1023 aa8.5□□□□□ -1.05
ITGB1-219ENST00000534049 PURBQ96QR8 312 aaKnown RBP8.5□□□□□ -1.05
ITGB1-219ENST00000534049 GPR37L1O60883 481 aa8.49□□□□□ -1.05
ITGB1-219ENST00000534049 BMP2P12643 396 aa8.49□□□□□ -1.05
ITGB1-219ENST00000534049 MCM6Q14566 821 aa8.49□□□□□ -1.05
ITGB1-219ENST00000534049 NPAS3Q8IXF0 933 aa8.49□□□□□ -1.05
ITGB1-219ENST00000534049 EIF4G2P78344 907 aaKnown RBP eCLIP8.48□□□□□ -1.05
ITGB1-219ENST00000534049 WASHC4Q2M389 1173 aa8.48□□□□□ -1.05
ITGB1-219ENST00000534049 TBC1D2BQ9UPU7 963 aa8.48□□□□□ -1.05
ITGB1-219ENST00000534049 ERVH48-1M5A8F1 160 aa8.47□□□□□ -1.05
ITGB1-219ENST00000534049 FLIIQ13045 1269 aa8.47□□□□□ -1.05
ITGB1-219ENST00000534049 WWC1Q8IX03 1113 aa8.47□□□□□ -1.05
ITGB1-219ENST00000534049 RAB15P59190 212 aa8.46□□□□□ -1.06
ITGB1-219ENST00000534049 C6orf118Q5T5N4 469 aa8.46□□□□□ -1.06
ITGB1-219ENST00000534049 MAN1A2O60476 641 aa8.45□□□□□ -1.06
ITGB1-219ENST00000534049 TREML4Q6UXN2 200 aa8.45□□□□□ -1.06
ITGB1-219ENST00000534049 ZNF784Q8NCA9 323 aaPredicted RBP8.45□□□□□ -1.06
ITGB1-219ENST00000534049 SLC16A10Q8TF71 515 aa8.45□□□□□ -1.06
ITGB1-219ENST00000534049 SPINT1O43278 529 aa8.44□□□□□ -1.06
ITGB1-219ENST00000534049 GIGYF1O75420 1035 aaPredicted RBP8.44□□□□□ -1.06
ITGB1-219ENST00000534049 ADH1AP07327 375 aa8.44□□□□□ -1.06
ITGB1-219ENST00000534049 SOX11P35716 441 aa8.44□□□□□ -1.06
ITGB1-219ENST00000534049 NXF1Q9UBU9 619 aaKnown RBP8.44□□□□□ -1.06
ITGB1-219ENST00000534049 TERTO14746 1132 aaKnown RBP8.43□□□□□ -1.06
ITGB1-219ENST00000534049 WFS1O76024 890 aa8.43□□□□□ -1.06
ITGB1-219ENST00000534049 CBLBQ13191 982 aa8.43□□□□□ -1.06
ITGB1-219ENST00000534049 ESF1Q9H501 851 aaKnown RBP8.43□□□□□ -1.06
ITGB1-219ENST00000534049 SOS2Q07890 1332 aaPredicted RBP8.43□□□□□ -1.06
ITGB1-219ENST00000534049 TTLL8A6PVC2 850 aa8.42□□□□□ -1.06
ITGB1-219ENST00000534049 RAD21O60216 631 aa8.42□□□□□ -1.06
ITGB1-219ENST00000534049 LILRA1O75019 489 aa8.42□□□□□ -1.06
ITGB1-219ENST00000534049 ABL2P42684 1182 aa8.42□□□□□ -1.06
ITGB1-219ENST00000534049 GDPD2Q9HCC8 539 aa8.42□□□□□ -1.06
ITGB1-219ENST00000534049 TMPRSS4Q9NRS4 437 aa8.42□□□□□ -1.06
ITGB1-219ENST00000534049 IRF5Q13568 498 aa8.41□□□□□ -1.06
ITGB1-219ENST00000534049 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.41□□□□□ -1.065e-6■□□□□ 10.3
ITGB1-219ENST00000534049 CC2D2BQ6DHV5 1058 aa8.41□□□□□ -1.06
ITGB1-219ENST00000534049 ERVK-9P63128 1117 aa8.4□□□□□ -1.06
ITGB1-219ENST00000534049 NFX1Q12986 1120 aaKnown RBP8.4□□□□□ -1.06
ITGB1-219ENST00000534049 CYP2U1Q7Z449 544 aa8.4□□□□□ -1.06
ITGB1-219ENST00000534049 CYLDQ9NQC7 956 aa8.4□□□□□ -1.06
ITGB1-219ENST00000534049 CEP126Q9P2H0 1117 aa8.4□□□□□ -1.06
ITGB1-219ENST00000534049 PTGIRP43119 386 aa8.39□□□□□ -1.07
ITGB1-219ENST00000534049 RELBQ01201 579 aa8.39□□□□□ -1.07
ITGB1-219ENST00000534049 PCDHB11Q9Y5F2 797 aa8.39□□□□□ -1.07
ITGB1-219ENST00000534049 ATP5J2-PTCD1G3V325 749 aa8.38□□□□□ -1.07
ITGB1-219ENST00000534049 MYCP01106 439 aaPredicted RBP8.38□□□□□ -1.07
ITGB1-219ENST00000534049 SLFNL1Q499Z3 407 aa8.38□□□□□ -1.07
ITGB1-219ENST00000534049 IRF7Q92985 503 aa8.38□□□□□ -1.07
ITGB1-219ENST00000534049 COG6Q9Y2V7 657 aa8.38□□□□□ -1.07
ITGB1-219ENST00000534049 UBTFP17480 764 aaKnown RBP8.37□□□□□ -1.07
ITGB1-219ENST00000534049 SEMA3FQ13275 785 aa8.37□□□□□ -1.07
ITGB1-219ENST00000534049 SIRT1Q96EB6 747 aa8.37□□□□□ -1.07
ITGB1-219ENST00000534049 AGBL1Q96MI9 1066 aa8.37□□□□□ -1.07
ITGB1-219ENST00000534049 POLMQ9NP87 494 aaPredicted RBP8.37□□□□□ -1.07
ITGB1-219ENST00000534049 DNMT3LQ9UJW3 386 aa8.37□□□□□ -1.07
ITGB1-219ENST00000534049 H3BM21 787 aa8.36□□□□□ -1.07
ITGB1-219ENST00000534049 GPC1P35052 558 aa8.36□□□□□ -1.07
ITGB1-219ENST00000534049 ADD1P35611 737 aaKnown RBP8.36□□□□□ -1.07
ITGB1-219ENST00000534049 VAC14Q08AM6 782 aa8.36□□□□□ -1.07
ITGB1-219ENST00000534049 LCE2AQ5TA79 106 aaPredicted RBP8.36□□□□□ -1.07
ITGB1-219ENST00000534049 INSM2Q96T92 566 aaPredicted RBP8.36□□□□□ -1.07
ITGB1-219ENST00000534049 RNF135Q8IUD6 432 aa8.35□□□□□ -1.07
ITGB1-219ENST00000534049 WIPF1O43516 503 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms