RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 SLC12A5Q9H2X9 1139 aa24.66■■□□□ 1.54
VPS51-213ENST00000533827 RGPD5Q99666 1765 aa24.66■■□□□ 1.54
VPS51-213ENST00000533827 TOM1L2Q6ZVM7 507 aa24.65■■□□□ 1.54
VPS51-213ENST00000533827 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.65■■□□□ 1.54
VPS51-213ENST00000533827 TESK2Q96S53 571 aa24.65■■□□□ 1.54
VPS51-213ENST00000533827 HDGFL2Q7Z4V5 671 aaPredicted RBP24.64■■□□□ 1.54
VPS51-213ENST00000533827 ST20-MTHFSA0A0A6YYL1 179 aa24.63■■□□□ 1.53
VPS51-213ENST00000533827 EZH2Q15910 746 aaKnown RBP24.63■■□□□ 1.53
VPS51-213ENST00000533827 CAMKK2Q96RR4 588 aa24.63■■□□□ 1.53
VPS51-213ENST00000533827 WNK3Q9BYP7 1800 aa24.63■■□□□ 1.53
VPS51-213ENST00000533827 ABCC6O95255 1503 aa24.62■■□□□ 1.53
VPS51-213ENST00000533827 LRRC37A3O60309 1634 aa24.62■■□□□ 1.53
VPS51-213ENST00000533827 NME9Q86XW9 330 aa24.62■■□□□ 1.53
VPS51-213ENST00000533827 EDC4Q6P2E9 1401 aaKnown RBP24.61■■□□□ 1.53
VPS51-213ENST00000533827 APBA3O96018 575 aa24.61■■□□□ 1.53
VPS51-213ENST00000533827 A0A1W2PP64 1363 aa24.61■■□□□ 1.53
VPS51-213ENST00000533827 PEAK1Q9H792 1746 aa24.61■■□□□ 1.53
VPS51-213ENST00000533827 PSDA5PKW4 1024 aaPredicted RBP24.6■■□□□ 1.53
VPS51-213ENST00000533827 TERF2IPQ9NYB0 399 aa24.6■■□□□ 1.53
VPS51-213ENST00000533827 PARD3Q8TEW0 1356 aa24.59■■□□□ 1.53
VPS51-213ENST00000533827 CARD10Q9BWT7 1032 aa24.59■■□□□ 1.53
VPS51-213ENST00000533827 C11orf95C9JLR9 678 aaPredicted RBP24.58■■□□□ 1.53
VPS51-213ENST00000533827 SLC24A1O60721 1099 aa24.58■■□□□ 1.53
VPS51-213ENST00000533827 DDB1Q16531 1140 aa24.58■■□□□ 1.53
VPS51-213ENST00000533827 CDCA7Q9BWT1 371 aaPredicted RBP24.57■■□□□ 1.52
VPS51-213ENST00000533827 OVOS2A0A0G2JMS6 1433 aa24.57■■□□□ 1.52
VPS51-213ENST00000533827 OVOS2A0A0J9YW53 1432 aa24.57■■□□□ 1.52
VPS51-213ENST00000533827 OVOS2Q6IE36 1432 aa24.57■■□□□ 1.52
VPS51-213ENST00000533827 LRP5O75197 1615 aa24.57■■□□□ 1.52
VPS51-213ENST00000533827 RREB1Q92766 1687 aa24.56■■□□□ 1.52
VPS51-213ENST00000533827 NINLQ9Y2I6 1382 aa24.56■■□□□ 1.52
VPS51-213ENST00000533827 CSB-PGBD3P0DP91 1061 aa24.56■■□□□ 1.52
VPS51-213ENST00000533827 LTN1O94822 1766 aa24.55■■□□□ 1.52
VPS51-213ENST00000533827 SBF2Q86WG5 1849 aa24.54■■□□□ 1.52
VPS51-213ENST00000533827 R3HDM1Q15032 1099 aaKnown RBP24.53■■□□□ 1.52
VPS51-213ENST00000533827 CCDC7Q96M83 1385 aa24.53■■□□□ 1.52
VPS51-213ENST00000533827 MARCH10Q8NA82 808 aaPredicted RBP24.51■■□□□ 1.51
VPS51-213ENST00000533827 NUP188Q5SRE5 1749 aa24.51■■□□□ 1.51
VPS51-213ENST00000533827 ERBB3P21860 1342 aa24.51■■□□□ 1.51
VPS51-213ENST00000533827 USP47Q96K76 1375 aa24.51■■□□□ 1.51
VPS51-213ENST00000533827 BCL9O00512 1426 aa24.5■■□□□ 1.51
VPS51-213ENST00000533827 ANKRD36BQ8N2N9 1353 aa24.47■■□□□ 1.51
VPS51-213ENST00000533827 EXOC5O00471 708 aa24.47■■□□□ 1.51
VPS51-213ENST00000533827 TMF1P82094 1093 aa24.47■■□□□ 1.51
VPS51-213ENST00000533827 TIMELESSQ9UNS1 1208 aa24.47■■□□□ 1.51
VPS51-213ENST00000533827 RGPD3A6NKT7 1758 aaPredicted RBP24.47■■□□□ 1.51
VPS51-213ENST00000533827 RGPD4Q7Z3J3 1758 aa24.47■■□□□ 1.51
VPS51-213ENST00000533827 PLSCR1O15162 318 aa24.45■■□□□ 1.5
VPS51-213ENST00000533827 ANKRD24Q8TF21 1146 aa24.45■■□□□ 1.5
VPS51-213ENST00000533827 BCL11BQ9C0K0 894 aaPredicted RBP24.45■■□□□ 1.5
VPS51-213ENST00000533827 TNS2Q63HR2 1409 aa24.44■■□□□ 1.5
VPS51-213ENST00000533827 CLSPNQ9HAW4 1339 aa24.44■■□□□ 1.5
VPS51-213ENST00000533827 PTF1AQ7RTS3 328 aa24.44■■□□□ 1.5
VPS51-213ENST00000533827 NLRP2Q9NX02 1062 aa24.44■■□□□ 1.5
VPS51-213ENST00000533827 COG3Q96JB2 828 aa24.43■■□□□ 1.5
VPS51-213ENST00000533827 NBPF14Q5TI25 921 aa24.42■■□□□ 1.5
VPS51-213ENST00000533827 IP6K1Q92551 441 aa24.42■■□□□ 1.5
VPS51-213ENST00000533827 PCGF6Q9BYE7 350 aa24.4■■□□□ 1.5
VPS51-213ENST00000533827 IL2RBP14784 551 aa24.39■■□□□ 1.49
VPS51-213ENST00000533827 FAM208AQ9UK61 1670 aaKnown RBP24.38■■□□□ 1.49
VPS51-213ENST00000533827 CDCA8Q53HL2 280 aa24.38■■□□□ 1.49
VPS51-213ENST00000533827 MAP3K19Q56UN5 1328 aa24.37■■□□□ 1.49
VPS51-213ENST00000533827 FYB1O15117 783 aa24.37■■□□□ 1.49
VPS51-213ENST00000533827 FBLN1P23142 703 aa24.37■■□□□ 1.49
VPS51-213ENST00000533827 HOXC9P31274 260 aa24.35■■□□□ 1.49
VPS51-213ENST00000533827 PROM2Q8N271 834 aa24.35■■□□□ 1.49
VPS51-213ENST00000533827 NHSQ6T4R5 1651 aa24.34■■□□□ 1.49
VPS51-213ENST00000533827 MYOM1P52179 1685 aa24.34■■□□□ 1.49
VPS51-213ENST00000533827 KCNQ2O43526 872 aa24.33■■□□□ 1.49
VPS51-213ENST00000533827 LTV1Q96GA3 475 aaPredicted RBP24.33■■□□□ 1.49
VPS51-213ENST00000533827 GGNBP2Q9H3C7 697 aa24.33■■□□□ 1.49
VPS51-213ENST00000533827 AMPHP49418 695 aa24.32■■□□□ 1.48
VPS51-213ENST00000533827 KIF20BQ96Q89 1820 aa24.31■■□□□ 1.48
VPS51-213ENST00000533827 RTL1A6NKG5 1358 aa24.3■■□□□ 1.48
VPS51-213ENST00000533827 ANO8Q9HCE9 1232 aaPredicted RBP24.3■■□□□ 1.48
VPS51-213ENST00000533827 RRS1Q15050 365 aaKnown RBP24.29■■□□□ 1.48
VPS51-213ENST00000533827 ACSBG1Q96GR2 724 aa24.29■■□□□ 1.48
VPS51-213ENST00000533827 RGPD2P0DJD1 1756 aa24.29■■□□□ 1.48
VPS51-213ENST00000533827 TXNRD1Q16881 649 aa24.28■■□□□ 1.48
VPS51-213ENST00000533827 CARD14Q9BXL6 1004 aa24.28■■□□□ 1.48
VPS51-213ENST00000533827 CASZ1Q86V15 1759 aa24.25■■□□□ 1.47
VPS51-213ENST00000533827 BTAF1O14981 1849 aa24.24■■□□□ 1.47
VPS51-213ENST00000533827 SPON1Q9HCB6 807 aa24.24■■□□□ 1.47
VPS51-213ENST00000533827 NSD3Q9BZ95 1437 aa24.24■■□□□ 1.47
VPS51-213ENST00000533827 DDX54Q8TDD1 881 aaKnown RBP24.23■■□□□ 1.47
VPS51-213ENST00000533827 NBPF6Q5VWK0 638 aa24.22■■□□□ 1.47
VPS51-213ENST00000533827 NBPF4Q96M43 638 aa24.22■■□□□ 1.47
VPS51-213ENST00000533827 SHANK3Q9BYB0 1731 aa24.21■■□□□ 1.47
VPS51-213ENST00000533827 MEGF6O75095 1541 aa24.21■■□□□ 1.47
VPS51-213ENST00000533827 INSRP06213 1382 aa24.21■■□□□ 1.47
VPS51-213ENST00000533827 KIF24Q5T7B8 1368 aa24.21■■□□□ 1.47
VPS51-213ENST00000533827 SLC15A2Q16348 729 aa24.2■■□□□ 1.46
VPS51-213ENST00000533827 HSP90AB2PQ58FF8 381 aa24.2■■□□□ 1.46
VPS51-213ENST00000533827 PDGFDQ9GZP0 370 aaPredicted RBP24.2■■□□□ 1.46
VPS51-213ENST00000533827 SMG6Q86US8 1419 aaKnown RBP24.19■■□□□ 1.46
VPS51-213ENST00000533827 FLT4P35916 1363 aa24.19■■□□□ 1.46
VPS51-213ENST00000533827 ZCRB1Q8TBF4 217 aaKnown RBP24.19■■□□□ 1.46
VPS51-213ENST00000533827 STK32BQ9NY57 414 aa24.19■■□□□ 1.46
VPS51-213ENST00000533827 PAPPAQ13219 1627 aa24.18■■□□□ 1.46
VPS51-213ENST00000533827 CCER1Q8TC90 406 aaPredicted RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms