RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 BCL11BQ9C0K0 894 aaPredicted RBP19.32■□□□□ 0.68
PPFIA1-222ENST00000532504 MAST1Q9Y2H9 1570 aa19.32■□□□□ 0.68
PPFIA1-222ENST00000532504 FOXD4L1Q9NU39 408 aa19.31■□□□□ 0.68
PPFIA1-222ENST00000532504 FAM83GA6ND36 823 aa19.3■□□□□ 0.68
PPFIA1-222ENST00000532504 ANKRD36BQ8N2N9 1353 aa19.3■□□□□ 0.68
PPFIA1-222ENST00000532504 PLCB2Q00722 1185 aa19.3■□□□□ 0.68
PPFIA1-222ENST00000532504 WASHC4Q2M389 1173 aa19.3■□□□□ 0.68
PPFIA1-222ENST00000532504 CFAP74Q9C0B2 1584 aa19.3■□□□□ 0.68
PPFIA1-222ENST00000532504 ZCRB1Q8TBF4 217 aaKnown RBP19.3■□□□□ 0.68
PPFIA1-222ENST00000532504 BTG4Q9NY30 223 aa19.3■□□□□ 0.68
PPFIA1-222ENST00000532504 DDB1Q16531 1140 aa19.29■□□□□ 0.68
PPFIA1-222ENST00000532504 GNAI2P04899 355 aa19.29■□□□□ 0.68
PPFIA1-222ENST00000532504 SLKQ9H2G2 1235 aaPredicted RBP19.29■□□□□ 0.68
PPFIA1-222ENST00000532504 PHF14O94880 888 aa19.28■□□□□ 0.68
PPFIA1-222ENST00000532504 CLASRPQ8N2M8 674 aaKnown RBP19.28■□□□□ 0.68
PPFIA1-222ENST00000532504 MPHOSPH8Q99549 860 aa19.28■□□□□ 0.68
PPFIA1-222ENST00000532504 RALGAPBQ86X10 1494 aa19.28■□□□□ 0.68
PPFIA1-222ENST00000532504 NSD2O96028 1365 aa19.28■□□□□ 0.68
PPFIA1-222ENST00000532504 SAMD1Q6SPF0 538 aaPredicted RBP19.27■□□□□ 0.68
PPFIA1-222ENST00000532504 AEBP1Q8IUX7 1158 aa19.27■□□□□ 0.68
PPFIA1-222ENST00000532504 FAM161AQ3B820 660 aa19.27■□□□□ 0.67
PPFIA1-222ENST00000532504 RUFY2Q8WXA3 655 aa19.27■□□□□ 0.67
PPFIA1-222ENST00000532504 CLSTN1O94985 981 aa19.26■□□□□ 0.67
PPFIA1-222ENST00000532504 TESK2Q96S53 571 aa19.26■□□□□ 0.67
PPFIA1-222ENST00000532504 ERC2O15083 957 aa19.26■□□□□ 0.67
PPFIA1-222ENST00000532504 CCT4P50991 539 aaKnown RBP19.26■□□□□ 0.67
PPFIA1-222ENST00000532504 CCDC57Q2TAC2 916 aa19.26■□□□□ 0.67
PPFIA1-222ENST00000532504 DNAJC2Q99543 621 aaKnown RBP19.26■□□□□ 0.67
PPFIA1-222ENST00000532504 FMNL2Q96PY5 1086 aa19.26■□□□□ 0.67
PPFIA1-222ENST00000532504 SAMD9LQ8IVG5 1584 aa19.25■□□□□ 0.67
PPFIA1-222ENST00000532504 ABCC1P33527 1531 aa19.25■□□□□ 0.67
PPFIA1-222ENST00000532504 VPS53Q5VIR6 699 aa19.25■□□□□ 0.67
PPFIA1-222ENST00000532504 ATF7IPQ6VMQ6 1270 aa19.24■□□□□ 0.67
PPFIA1-222ENST00000532504 AK7Q96M32 723 aa19.24■□□□□ 0.67
PPFIA1-222ENST00000532504 ANO2Q9NQ90 1003 aa19.24■□□□□ 0.67
PPFIA1-222ENST00000532504 EIF4A2Q14240 407 aaKnown RBP19.24■□□□□ 0.67
PPFIA1-222ENST00000532504 AMER1Q5JTC6 1135 aaPredicted RBP19.24■□□□□ 0.67
PPFIA1-222ENST00000532504 POLKQ9UBT6 870 aa19.24■□□□□ 0.67
PPFIA1-222ENST00000532504 ZNF652Q9Y2D9 606 aa19.23■□□□□ 0.67
PPFIA1-222ENST00000532504 ZBTB3Q9H5J0 574 aa19.23■□□□□ 0.67
PPFIA1-222ENST00000532504 MLH3Q9UHC1 1453 aa19.23■□□□□ 0.67
PPFIA1-222ENST00000532504 IFT57Q9NWB7 429 aa19.23■□□□□ 0.67
PPFIA1-222ENST00000532504 MAGI2Q86UL8 1455 aa19.23■□□□□ 0.67
PPFIA1-222ENST00000532504 IL2RBP14784 551 aa19.22■□□□□ 0.67
PPFIA1-222ENST00000532504 GPTP24298 496 aa19.22■□□□□ 0.67
PPFIA1-222ENST00000532504 MYD88Q99836 296 aa19.22■□□□□ 0.67
PPFIA1-222ENST00000532504 NCBP3Q53F19 620 aaKnown RBP19.22■□□□□ 0.67
PPFIA1-222ENST00000532504 NOP58Q9Y2X3 529 aaKnown RBP19.22■□□□□ 0.67
PPFIA1-222ENST00000532504 SLC39A6Q13433 755 aa19.22■□□□□ 0.67
PPFIA1-222ENST00000532504 TRPM2O94759 1503 aa19.22■□□□□ 0.67
PPFIA1-222ENST00000532504 A0A1W2PP64 1363 aa19.22■□□□□ 0.67
PPFIA1-222ENST00000532504 CARD14Q9BXL6 1004 aa19.21■□□□□ 0.67
PPFIA1-222ENST00000532504 DHX16O60231 1041 aaKnown RBP19.21■□□□□ 0.67
PPFIA1-222ENST00000532504 ZNF219Q9P2Y4 722 aaPredicted RBP19.21■□□□□ 0.67
PPFIA1-222ENST00000532504 ANP32EQ9BTT0 268 aa19.21■□□□□ 0.66
PPFIA1-222ENST00000532504 FSD1Q9BTV5 496 aa19.21■□□□□ 0.66
PPFIA1-222ENST00000532504 SRGAP3O43295 1099 aa19.2■□□□□ 0.66
PPFIA1-222ENST00000532504 SLFN5Q08AF3 891 aa19.2■□□□□ 0.66
PPFIA1-222ENST00000532504 CTDP1Q9Y5B0 961 aaPredicted RBP19.2■□□□□ 0.66
PPFIA1-222ENST00000532504 TMEM94Q12767 1356 aa19.2■□□□□ 0.66
PPFIA1-222ENST00000532504 ZKSCAN1P17029 563 aaPredicted RBP19.2■□□□□ 0.66
PPFIA1-222ENST00000532504 ARHGEF5Q12774 1597 aa19.19■□□□□ 0.66
PPFIA1-222ENST00000532504 ST18O60284 1047 aa19.19■□□□□ 0.66
PPFIA1-222ENST00000532504 HMGB2P26583 209 aaKnown RBP19.19■□□□□ 0.66
PPFIA1-222ENST00000532504 FOXD4L5Q5VV16 416 aaPredicted RBP19.19■□□□□ 0.66
PPFIA1-222ENST00000532504 FOXD4L4Q8WXT5 416 aaPredicted RBP19.19■□□□□ 0.66
PPFIA1-222ENST00000532504 F6X3S4 739 aa19.19■□□□□ 0.66
PPFIA1-222ENST00000532504 ANXA1P04083 346 aa19.19■□□□□ 0.66
PPFIA1-222ENST00000532504 SYNE3Q6ZMZ3 975 aa19.19■□□□□ 0.66
PPFIA1-222ENST00000532504 TBC1D2BQ9UPU7 963 aa19.19■□□□□ 0.66
PPFIA1-222ENST00000532504 CT47B1P0C2W7 299 aaPredicted RBP19.19■□□□□ 0.66
PPFIA1-222ENST00000532504 TRDNQ13061 729 aa19.19■□□□□ 0.66
PPFIA1-222ENST00000532504 MAP3K19Q56UN5 1328 aa19.18■□□□□ 0.66
PPFIA1-222ENST00000532504 TTC39AQ5SRH9 613 aa19.18■□□□□ 0.66
PPFIA1-222ENST00000532504 SPINK5Q9NQ38 1064 aaPredicted RBP19.18■□□□□ 0.66
PPFIA1-222ENST00000532504 PLEKHH1Q9ULM0 1364 aa19.18■□□□□ 0.66
PPFIA1-222ENST00000532504 KDM6BO15054 1643 aa19.18■□□□□ 0.66
PPFIA1-222ENST00000532504 TRMT112Q9UI30 125 aaKnown RBP19.18■□□□□ 0.66
PPFIA1-222ENST00000532504 MTMR7Q9Y216 660 aa19.17■□□□□ 0.66
PPFIA1-222ENST00000532504 MARCH6O60337 910 aa19.17■□□□□ 0.66
PPFIA1-222ENST00000532504 AKAP17AQ02040 695 aaKnown RBP19.17■□□□□ 0.66
PPFIA1-222ENST00000532504 PTMAP06454 111 aaKnown RBP19.17■□□□□ 0.66
PPFIA1-222ENST00000532504 CCDC158Q5M9N0 1113 aa19.17■□□□□ 0.66
PPFIA1-222ENST00000532504 LARP1Q6PKG0 1096 aaKnown RBP19.17■□□□□ 0.66
PPFIA1-222ENST00000532504 GNL3LQ9NVN8 582 aaKnown RBP19.17■□□□□ 0.66
PPFIA1-222ENST00000532504 RBM19Q9Y4C8 960 aaKnown RBP19.17■□□□□ 0.66
PPFIA1-222ENST00000532504 REC8O95072 547 aa19.17■□□□□ 0.66
PPFIA1-222ENST00000532504 ZNF335Q9H4Z2 1342 aaPredicted RBP19.17■□□□□ 0.66
PPFIA1-222ENST00000532504 ARHGEF12Q9NZN5 1544 aa19.17■□□□□ 0.66
PPFIA1-222ENST00000532504 ATP6V1AP38606 617 aa19.16■□□□□ 0.66
PPFIA1-222ENST00000532504 FLT4P35916 1363 aa19.16■□□□□ 0.66
PPFIA1-222ENST00000532504 HOXC9P31274 260 aa19.16■□□□□ 0.66
PPFIA1-222ENST00000532504 RASSF8Q8NHQ8 419 aa19.16■□□□□ 0.66
PPFIA1-222ENST00000532504 SSH1Q8WYL5 1049 aa19.16■□□□□ 0.66
PPFIA1-222ENST00000532504 FANCIQ9NVI1 1328 aa19.16■□□□□ 0.66
PPFIA1-222ENST00000532504 PDE3AQ14432 1141 aa19.16■□□□□ 0.66
PPFIA1-222ENST00000532504 EYA1Q99502 592 aa19.16■□□□□ 0.66
PPFIA1-222ENST00000532504 IGHMBP2P38935 993 aaKnown RBP19.16■□□□□ 0.66
PPFIA1-222ENST00000532504 RFC4P35249 363 aa19.15■□□□□ 0.66
PPFIA1-222ENST00000532504 NPHP4O75161 1426 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms