RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 USP17L11C9JVI0 530 aa6.47□□□□□ -1.37
AC055878.1-201ENST00000531858 USP17L21D6R901 530 aa6.47□□□□□ -1.37
AC055878.1-201ENST00000531858 USP17L18D6R9N7 530 aa6.47□□□□□ -1.37
AC055878.1-201ENST00000531858 USP17L22D6RA61 530 aa6.47□□□□□ -1.37
AC055878.1-201ENST00000531858 USP17L17D6RBQ6 530 aa6.47□□□□□ -1.37
AC055878.1-201ENST00000531858 USP17L19D6RCP7 530 aa6.47□□□□□ -1.37
AC055878.1-201ENST00000531858 USP17L20D6RJB6 530 aa6.47□□□□□ -1.37
AC055878.1-201ENST00000531858 MCCD1P59942 119 aaPredicted RBP6.47□□□□□ -1.37
AC055878.1-201ENST00000531858 FAM69CQ0P6D2 419 aa6.47□□□□□ -1.37
AC055878.1-201ENST00000531858 USP17L24Q0WX57 530 aa6.47□□□□□ -1.37
AC055878.1-201ENST00000531858 NUDT18Q6ZVK8 323 aa6.47□□□□□ -1.37
AC055878.1-201ENST00000531858 BIN2Q9UBW5 565 aaPredicted RBP6.47□□□□□ -1.37
AC055878.1-201ENST00000531858 FAM198AQ9UFP1 575 aa6.47□□□□□ -1.37
AC055878.1-201ENST00000531858 ZC3H4Q9UPT8 1303 aaKnown RBP6.47□□□□□ -1.37
AC055878.1-201ENST00000531858 CADPSQ9ULU8 1353 aa6.46□□□□□ -1.37
AC055878.1-201ENST00000531858 CFAP99D6REC4 459 aa6.46□□□□□ -1.38
AC055878.1-201ENST00000531858 PPM1GO15355 546 aaPredicted RBP6.46□□□□□ -1.38
AC055878.1-201ENST00000531858 ATP2B4P23634 1241 aa6.46□□□□□ -1.38
AC055878.1-201ENST00000531858 PTK7Q13308 1070 aa6.46□□□□□ -1.38
AC055878.1-201ENST00000531858 DESI1Q6ICB0 168 aa6.46□□□□□ -1.38
AC055878.1-201ENST00000531858 TATDN2Q93075 761 aa6.46□□□□□ -1.38
AC055878.1-201ENST00000531858 ZBBXA8MT70 800 aa6.45□□□□□ -1.38
AC055878.1-201ENST00000531858 DGAT1O75907 488 aa6.45□□□□□ -1.38
AC055878.1-201ENST00000531858 SKIP12755 728 aa6.45□□□□□ -1.38
AC055878.1-201ENST00000531858 TREML4Q6UXN2 200 aa6.45□□□□□ -1.38
AC055878.1-201ENST00000531858 SAMD7Q7Z3H4 446 aa6.45□□□□□ -1.38
AC055878.1-201ENST00000531858 FBXO33Q7Z6M2 555 aa6.45□□□□□ -1.38
AC055878.1-201ENST00000531858 EPS8L1Q8TE68 723 aa6.45□□□□□ -1.38
AC055878.1-201ENST00000531858 TSC1Q92574 1164 aa6.45□□□□□ -1.38
AC055878.1-201ENST00000531858 ZNF516Q92618 1163 aa6.45□□□□□ -1.38
AC055878.1-201ENST00000531858 C6orf229H3BNL8 230 aa6.44□□□□□ -1.38
AC055878.1-201ENST00000531858 ITGAEP38570 1179 aa6.44□□□□□ -1.38
AC055878.1-201ENST00000531858 SERPINB4P48594 390 aa6.44□□□□□ -1.38
AC055878.1-201ENST00000531858 NR6A1Q15406 480 aa6.44□□□□□ -1.38
AC055878.1-201ENST00000531858 NAALADL2Q58DX5 795 aa6.44□□□□□ -1.38
AC055878.1-201ENST00000531858 ANKMY2Q8IV38 441 aa6.44□□□□□ -1.38
AC055878.1-201ENST00000531858 ZSCAN29Q8IWY8 852 aaPredicted RBP6.44□□□□□ -1.38
AC055878.1-201ENST00000531858 ANKRD13AQ8IZ07 590 aa6.44□□□□□ -1.38
AC055878.1-201ENST00000531858 MKRN1Q9UHC7 482 aaKnown RBP6.44□□□□□ -1.38
AC055878.1-201ENST00000531858 TSKSQ9UJT2 592 aa6.44□□□□□ -1.38
AC055878.1-201ENST00000531858 PNMA3Q9UL41 463 aa6.44□□□□□ -1.38
AC055878.1-201ENST00000531858 RASA1P20936 1047 aa6.43□□□□□ -1.38
AC055878.1-201ENST00000531858 CRTC2Q53ET0 693 aaPredicted RBP6.43□□□□□ -1.38
AC055878.1-201ENST00000531858 ASB16Q96NS5 453 aa6.43□□□□□ -1.38
AC055878.1-201ENST00000531858 POTECB2RU33 542 aa6.42□□□□□ -1.38
AC055878.1-201ENST00000531858 SMARCA5O60264 1052 aaPredicted RBP6.42□□□□□ -1.38
AC055878.1-201ENST00000531858 RECKO95980 971 aa6.42□□□□□ -1.38
AC055878.1-201ENST00000531858 SLC4A3P48751 1232 aa6.42□□□□□ -1.38
AC055878.1-201ENST00000531858 MAP7D1Q3KQU3 841 aa6.42□□□□□ -1.38
AC055878.1-201ENST00000531858 TRIM50Q86XT4 487 aa6.42□□□□□ -1.38
AC055878.1-201ENST00000531858 SLAIN2Q9P270 581 aa6.42□□□□□ -1.38
AC055878.1-201ENST00000531858 PIK3CDO00329 1044 aa6.41□□□□□ -1.38
AC055878.1-201ENST00000531858 FBXO45P0C2W1 286 aa6.41□□□□□ -1.38
AC055878.1-201ENST00000531858 ATP1A2P50993 1020 aa6.41□□□□□ -1.38
AC055878.1-201ENST00000531858 FGD1P98174 961 aa6.41□□□□□ -1.38
AC055878.1-201ENST00000531858 TRIM67Q6ZTA4 783 aa6.41□□□□□ -1.38
AC055878.1-201ENST00000531858 TAS1R3Q7RTX0 852 aa6.41□□□□□ -1.38
AC055878.1-201ENST00000531858 NKX2-3Q8TAU0 364 aa6.41□□□□□ -1.38
AC055878.1-201ENST00000531858 CHMP4AQ9BY43 222 aa6.41□□□□□ -1.38
AC055878.1-201ENST00000531858 ICMTO60725 284 aa6.4□□□□□ -1.38
AC055878.1-201ENST00000531858 RNF40O75150 1001 aa6.4□□□□□ -1.38
AC055878.1-201ENST00000531858 LCE2AQ5TA79 106 aaPredicted RBP6.4□□□□□ -1.38
AC055878.1-201ENST00000531858 RETREG3Q86VR2 466 aa6.4□□□□□ -1.38
AC055878.1-201ENST00000531858 STK17AQ9UEE5 414 aa6.4□□□□□ -1.38
AC055878.1-201ENST00000531858 DCTN4Q9UJW0 460 aa6.4□□□□□ -1.38
AC055878.1-201ENST00000531858 GPSM3Q9Y4H4 160 aa6.4□□□□□ -1.38
AC055878.1-201ENST00000531858 SCAMP3O14828 347 aaKnown RBP6.39□□□□□ -1.39
AC055878.1-201ENST00000531858 HDGFP51858 240 aaKnown RBP6.39□□□□□ -1.39
AC055878.1-201ENST00000531858 PRR20EP86478 221 aa6.39□□□□□ -1.39
AC055878.1-201ENST00000531858 PRR20CP86479 221 aa6.39□□□□□ -1.39
AC055878.1-201ENST00000531858 PRR20DP86480 221 aa6.39□□□□□ -1.39
AC055878.1-201ENST00000531858 PRR20BP86481 221 aa6.39□□□□□ -1.39
AC055878.1-201ENST00000531858 PRR20AP86496 221 aa6.39□□□□□ -1.39
AC055878.1-201ENST00000531858 GUCA2AQ02747 115 aa6.39□□□□□ -1.39
AC055878.1-201ENST00000531858 SLFNL1Q499Z3 407 aa6.39□□□□□ -1.39
AC055878.1-201ENST00000531858 LYPD8Q6UX82 237 aa6.39□□□□□ -1.39
AC055878.1-201ENST00000531858 NOP9Q86U38 636 aaKnown RBP6.39□□□□□ -1.39
AC055878.1-201ENST00000531858 LARGE2Q8N3Y3 721 aa6.39□□□□□ -1.39
AC055878.1-201ENST00000531858 CHIC2Q9UKJ5 165 aa6.39□□□□□ -1.39
AC055878.1-201ENST00000531858 SMAPO00193 183 aa6.38□□□□□ -1.39
AC055878.1-201ENST00000531858 SLC10A3P09131 477 aa6.38□□□□□ -1.39
AC055878.1-201ENST00000531858 ERCC5P28715 1186 aaPredicted RBP6.38□□□□□ -1.39
AC055878.1-201ENST00000531858 SLC19A1P41440 591 aa6.38□□□□□ -1.39
AC055878.1-201ENST00000531858 APLP1P51693 650 aa6.38□□□□□ -1.39
AC055878.1-201ENST00000531858 SF3B2Q13435 895 aaKnown RBP6.38□□□□□ -1.39
AC055878.1-201ENST00000531858 NCOA4Q13772 614 aa6.38□□□□□ -1.39
AC055878.1-201ENST00000531858 EML3Q32P44 896 aa6.38□□□□□ -1.39
AC055878.1-201ENST00000531858 EAPPQ56P03 285 aaPredicted RBP6.38□□□□□ -1.39
AC055878.1-201ENST00000531858 FKBPLQ9UIM3 349 aa6.38□□□□□ -1.39
AC055878.1-201ENST00000531858 FAM187AA6NFU0 413 aa6.37□□□□□ -1.39
AC055878.1-201ENST00000531858 C21orf2O43822 256 aa6.37□□□□□ -1.39
AC055878.1-201ENST00000531858 ATP6V1AP38606 617 aa6.37□□□□□ -1.39
AC055878.1-201ENST00000531858 COPS2P61201 443 aa6.37□□□□□ -1.39
AC055878.1-201ENST00000531858 DPYDQ12882 1025 aa6.37□□□□□ -1.39
AC055878.1-201ENST00000531858 Q3C1V9 767 aa6.37□□□□□ -1.39
AC055878.1-201ENST00000531858 GLYCTKQ8IVS8 523 aa6.37□□□□□ -1.39
AC055878.1-201ENST00000531858 RGL4Q8IZJ4 473 aa6.37□□□□□ -1.39
AC055878.1-201ENST00000531858 FAM174AQ8TBP5 190 aa6.37□□□□□ -1.39
AC055878.1-201ENST00000531858 ARMC5Q96C12 935 aa6.37□□□□□ -1.39
AC055878.1-201ENST00000531858 CXXC1Q9P0U4 656 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms