RNA–Protein interactions for RNA: ENST00000531579.5

NXF1-210, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-210ENST00000531579 BARGINQ6ZT62 677 aa20.57■□□□□ 0.88
NXF1-210ENST00000531579 TCP11L2Q8N4U5 519 aa20.57■□□□□ 0.88
NXF1-210ENST00000531579 LMO7Q8WWI1 1683 aa20.57■□□□□ 0.88
NXF1-210ENST00000531579 NFAT5O94916 1531 aa20.57■□□□□ 0.88
NXF1-210ENST00000531579 COL5A2P05997 1499 aaPredicted RBP20.56■□□□□ 0.88
NXF1-210ENST00000531579 NSD3Q9BZ95 1437 aa20.55■□□□□ 0.88
NXF1-210ENST00000531579 A0A0G2JS52 829 aa20.55■□□□□ 0.88
NXF1-210ENST00000531579 MYT1Q01538 1121 aa20.55■□□□□ 0.88
NXF1-210ENST00000531579 TOM1L2Q6ZVM7 507 aa20.55■□□□□ 0.88
NXF1-210ENST00000531579 USP35Q9P2H5 1018 aa20.55■□□□□ 0.88
NXF1-210ENST00000531579 KIF7Q2M1P5 1343 aa20.54■□□□□ 0.88
NXF1-210ENST00000531579 WDR17Q8IZU2 1322 aa20.54■□□□□ 0.88
NXF1-210ENST00000531579 IP6K1Q92551 441 aa20.54■□□□□ 0.88
NXF1-210ENST00000531579 UPF1Q92900 1129 aaKnown RBP eCLIP20.54■□□□□ 0.88
NXF1-210ENST00000531579 CRB1P82279 1406 aa20.53■□□□□ 0.88
NXF1-210ENST00000531579 ABCC6O95255 1503 aa20.53■□□□□ 0.88
NXF1-210ENST00000531579 CSB-PGBD3P0DP91 1061 aa20.53■□□□□ 0.88
NXF1-210ENST00000531579 KRT27Q7Z3Y8 459 aa20.53■□□□□ 0.88
NXF1-210ENST00000531579 MYOM1P52179 1685 aa20.53■□□□□ 0.88
NXF1-210ENST00000531579 COL18A1P39060 1754 aa20.51■□□□□ 0.87
NXF1-210ENST00000531579 AMPHP49418 695 aa20.51■□□□□ 0.87
NXF1-210ENST00000531579 CCDC125Q86Z20 511 aa20.51■□□□□ 0.87
NXF1-210ENST00000531579 CARD10Q9BWT7 1032 aa20.51■□□□□ 0.87
NXF1-210ENST00000531579 CDCA7Q9BWT1 371 aaPredicted RBP20.5■□□□□ 0.87
NXF1-210ENST00000531579 KNSTRNQ9Y448 316 aa20.5■□□□□ 0.87
NXF1-210ENST00000531579 MAP3K19Q56UN5 1328 aa20.5■□□□□ 0.87
NXF1-210ENST00000531579 BLMP54132 1417 aaPredicted RBP20.49■□□□□ 0.87
NXF1-210ENST00000531579 ERBB3P21860 1342 aa20.48■□□□□ 0.87
NXF1-210ENST00000531579 FBLN1P23142 703 aa20.47■□□□□ 0.87
NXF1-210ENST00000531579 HOXC9P31274 260 aa20.47■□□□□ 0.87
NXF1-210ENST00000531579 PDE3BQ13370 1112 aa20.47■□□□□ 0.87
NXF1-210ENST00000531579 ANKRD24Q8TF21 1146 aa20.47■□□□□ 0.87
NXF1-210ENST00000531579 KIF24Q5T7B8 1368 aa20.46■□□□□ 0.87
NXF1-210ENST00000531579 ZEB1P37275 1124 aaPredicted RBP20.46■□□□□ 0.87
NXF1-210ENST00000531579 NSD2O96028 1365 aa20.46■□□□□ 0.87
NXF1-210ENST00000531579 CCDC7Q96M83 1385 aa20.46■□□□□ 0.87
NXF1-210ENST00000531579 RRS1Q15050 365 aaKnown RBP20.45■□□□□ 0.86
NXF1-210ENST00000531579 NLRP2Q9NX02 1062 aa20.45■□□□□ 0.86
NXF1-210ENST00000531579 WASHC2AQ641Q2 1341 aa20.45■□□□□ 0.86
NXF1-210ENST00000531579 RTL1A6NKG5 1358 aa20.44■□□□□ 0.86
NXF1-210ENST00000531579 LTN1O94822 1766 aa20.42■□□□□ 0.86
NXF1-210ENST00000531579 KIF20BQ96Q89 1820 aa20.42■□□□□ 0.86
NXF1-210ENST00000531579 PER1O15534 1290 aaPredicted RBP20.42■□□□□ 0.86
NXF1-210ENST00000531579 FAM196AQ6ZSG2 479 aa20.42■□□□□ 0.86
NXF1-210ENST00000531579 DDB1Q16531 1140 aa20.41■□□□□ 0.86
NXF1-210ENST00000531579 LTV1Q96GA3 475 aaPredicted RBP20.41■□□□□ 0.86
NXF1-210ENST00000531579 THSD7AQ9UPZ6 1657 aa20.41■□□□□ 0.86
NXF1-210ENST00000531579 EXOC5O00471 708 aa20.4■□□□□ 0.86
NXF1-210ENST00000531579 FLT4P35916 1363 aa20.4■□□□□ 0.86
NXF1-210ENST00000531579 MORC1Q86VD1 984 aa20.4■□□□□ 0.86
NXF1-210ENST00000531579 RGPD5Q99666 1765 aa20.4■□□□□ 0.86
NXF1-210ENST00000531579 INSRP06213 1382 aa20.39■□□□□ 0.85
NXF1-210ENST00000531579 SF3B2Q13435 895 aaKnown RBP20.39■□□□□ 0.85
NXF1-210ENST00000531579 AMER1Q5JTC6 1135 aaPredicted RBP20.39■□□□□ 0.85
NXF1-210ENST00000531579 POLKQ9UBT6 870 aa20.39■□□□□ 0.85
NXF1-210ENST00000531579 BRWD3Q6RI45 1802 aa20.39■□□□□ 0.85
NXF1-210ENST00000531579 IL2RBP14784 551 aa20.38■□□□□ 0.85
NXF1-210ENST00000531579 HSP90AB2PQ58FF8 381 aa20.38■□□□□ 0.85
NXF1-210ENST00000531579 PPM1GO15355 546 aaPredicted RBP20.37■□□□□ 0.85
NXF1-210ENST00000531579 EMILIN1Q9Y6C2 1016 aa20.37■□□□□ 0.85
NXF1-210ENST00000531579 SMG6Q86US8 1419 aaKnown RBP20.36■□□□□ 0.85
NXF1-210ENST00000531579 TNNT2P45379 298 aaPredicted RBP20.36■□□□□ 0.85
NXF1-210ENST00000531579 FAM182BQ5T319 152 aa20.35■□□□□ 0.85
NXF1-210ENST00000531579 DISP2A7MBM2 1401 aa20.34■□□□□ 0.85
NXF1-210ENST00000531579 NBPF6Q5VWK0 638 aa20.33■□□□□ 0.85
NXF1-210ENST00000531579 NBPF4Q96M43 638 aa20.33■□□□□ 0.85
NXF1-210ENST00000531579 NPC1L1Q9UHC9 1359 aa20.33■□□□□ 0.84
NXF1-210ENST00000531579 PARP4Q9UKK3 1724 aaKnown RBP20.32■□□□□ 0.84
NXF1-210ENST00000531579 MARCH10Q8NA82 808 aaPredicted RBP20.3■□□□□ 0.84
NXF1-210ENST00000531579 ANKRD26Q9UPS8 1709 aa20.3■□□□□ 0.84
NXF1-210ENST00000531579 FAM208AQ9UK61 1670 aaKnown RBP20.29■□□□□ 0.84
NXF1-210ENST00000531579 BAG6P46379 1132 aa20.29■□□□□ 0.84
NXF1-210ENST00000531579 CC2D1BQ5T0F9 858 aaKnown RBP20.29■□□□□ 0.84
NXF1-210ENST00000531579 OVOS2A0A0G2JMS6 1433 aa20.28■□□□□ 0.84
NXF1-210ENST00000531579 MAP2P11137 1827 aaKnown RBP20.28■□□□□ 0.84
NXF1-210ENST00000531579 TRIM37O94972 964 aa20.28■□□□□ 0.84
NXF1-210ENST00000531579 RAPGEF4Q8WZA2 1011 aa20.28■□□□□ 0.84
NXF1-210ENST00000531579 BCL9O00512 1426 aa20.27■□□□□ 0.84
NXF1-210ENST00000531579 TATP17735 454 aaPredicted RBP20.26■□□□□ 0.83
NXF1-210ENST00000531579 PEAK1Q9H792 1746 aa20.26■□□□□ 0.83
NXF1-210ENST00000531579 ZCRB1Q8TBF4 217 aaKnown RBP20.25■□□□□ 0.83
NXF1-210ENST00000531579 EYA1Q99502 592 aa20.25■□□□□ 0.83
NXF1-210ENST00000531579 EP400Q96L91 3159 aa20.25■□□□□ 0.83
NXF1-210ENST00000531579 EIF4A2Q14240 407 aaKnown RBP20.24■□□□□ 0.83
NXF1-210ENST00000531579 DEFB132Q7Z7B7 95 aa20.24■□□□□ 0.83
NXF1-210ENST00000531579 TNS2Q63HR2 1409 aa20.24■□□□□ 0.83
NXF1-210ENST00000531579 LRRC37A3O60309 1634 aa20.24■□□□□ 0.83
NXF1-210ENST00000531579 APBA3O96018 575 aa20.23■□□□□ 0.83
NXF1-210ENST00000531579 MTHFSP49914 203 aa20.23■□□□□ 0.83
NXF1-210ENST00000531579 USHBP1Q8N6Y0 703 aa20.23■□□□□ 0.83
NXF1-210ENST00000531579 BCL11BQ9C0K0 894 aaPredicted RBP20.23■□□□□ 0.83
NXF1-210ENST00000531579 DDX54Q8TDD1 881 aaKnown RBP20.22■□□□□ 0.83
NXF1-210ENST00000531579 WNK3Q9BYP7 1800 aa20.22■□□□□ 0.83
NXF1-210ENST00000531579 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.2■□□□□ 0.825e-8■■□□□ 13.9
NXF1-210ENST00000531579 EN1Q05925 392 aaPredicted RBP20.19■□□□□ 0.82
NXF1-210ENST00000531579 RGPD1P0DJD0 1748 aa20.19■□□□□ 0.82
NXF1-210ENST00000531579 NCAPD2Q15021 1401 aa20.19■□□□□ 0.82
NXF1-210ENST00000531579 PLSCR1O15162 318 aa20.18■□□□□ 0.82
NXF1-210ENST00000531579 CNGB1Q14028 1251 aaPredicted RBP20.18■□□□□ 0.82
NXF1-210ENST00000531579 SPG7Q9UQ90 795 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms