RNA–Protein interactions for RNA: ENST00000531352.5

ACER3-210, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 2,093 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-210ENST00000531352 CNGB1Q14028 1251 aaPredicted RBP16.06■□□□□ 0.16
ACER3-210ENST00000531352 GLI3P10071 1580 aa16.06■□□□□ 0.16
ACER3-210ENST00000531352 VPS72Q15906 364 aa16.06■□□□□ 0.16
ACER3-210ENST00000531352 RRS1Q15050 365 aaKnown RBP16.05■□□□□ 0.16
ACER3-210ENST00000531352 AMER1Q5JTC6 1135 aaPredicted RBP16.04■□□□□ 0.16
ACER3-210ENST00000531352 LARP1Q6PKG0 1096 aaKnown RBP16.04■□□□□ 0.16
ACER3-210ENST00000531352 CCDC9Q9Y3X0 531 aaKnown RBP16.04■□□□□ 0.16
ACER3-210ENST00000531352 KNSTRNQ9Y448 316 aa16.04■□□□□ 0.16
ACER3-210ENST00000531352 MAP3K19Q56UN5 1328 aa16.04■□□□□ 0.16
ACER3-210ENST00000531352 COL5A2P05997 1499 aaPredicted RBP16.04■□□□□ 0.16
ACER3-210ENST00000531352 EVA1CP58658 441 aa16.03■□□□□ 0.16
ACER3-210ENST00000531352 MAP2P11137 1827 aaKnown RBP16.02■□□□□ 0.16
ACER3-210ENST00000531352 ANKRD26Q9UPS8 1709 aa16.02■□□□□ 0.15
ACER3-210ENST00000531352 SPATA31A5Q5VU36 1347 aa16.02■□□□□ 0.15
ACER3-210ENST00000531352 SPATA31A7Q8IWB4 1347 aa16.02■□□□□ 0.15
ACER3-210ENST00000531352 TNNT2P45379 298 aaPredicted RBP16.01■□□□□ 0.15
ACER3-210ENST00000531352 USP35Q9P2H5 1018 aa16.01■□□□□ 0.15
ACER3-210ENST00000531352 RGS12O14924 1447 aa16■□□□□ 0.15
ACER3-210ENST00000531352 SPATA31A1Q5TZJ5 1347 aa16■□□□□ 0.15
ACER3-210ENST00000531352 DDX10Q13206 875 aaKnown RBP15.99■□□□□ 0.15
ACER3-210ENST00000531352 IP6K1Q92551 441 aa15.99■□□□□ 0.15
ACER3-210ENST00000531352 EMILIN1Q9Y6C2 1016 aa15.99■□□□□ 0.15
ACER3-210ENST00000531352 PEAK1Q9H792 1746 aa15.99■□□□□ 0.15
ACER3-210ENST00000531352 HOXC9P31274 260 aa15.99■□□□□ 0.15
ACER3-210ENST00000531352 FAM98CQ17RN3 349 aaKnown RBP15.99■□□□□ 0.15
ACER3-210ENST00000531352 CC2D1BQ5T0F9 858 aaKnown RBP15.98■□□□□ 0.15
ACER3-210ENST00000531352 WDR17Q8IZU2 1322 aa15.98■□□□□ 0.15
ACER3-210ENST00000531352 ONECUT3O60422 494 aaPredicted RBP15.98■□□□□ 0.15
ACER3-210ENST00000531352 AMPHP49418 695 aa15.98■□□□□ 0.15
ACER3-210ENST00000531352 CDK12Q9NYV4 1490 aaPredicted RBP15.97■□□□□ 0.15
ACER3-210ENST00000531352 ERBB3P21860 1342 aa15.97■□□□□ 0.15
ACER3-210ENST00000531352 POLKQ9UBT6 870 aa15.97■□□□□ 0.15
ACER3-210ENST00000531352 NSD2O96028 1365 aa15.97■□□□□ 0.15
ACER3-210ENST00000531352 BRWD3Q6RI45 1802 aa15.96■□□□□ 0.15
ACER3-210ENST00000531352 HSP90AB2PQ58FF8 381 aa15.96■□□□□ 0.15
ACER3-210ENST00000531352 MORC1Q86VD1 984 aa15.96■□□□□ 0.15
ACER3-210ENST00000531352 ABCC6O95255 1503 aa15.96■□□□□ 0.15
ACER3-210ENST00000531352 CRB1P82279 1406 aa15.96■□□□□ 0.15
ACER3-210ENST00000531352 TOM1L2Q6ZVM7 507 aa15.96■□□□□ 0.15
ACER3-210ENST00000531352 ANKRD24Q8TF21 1146 aa15.96■□□□□ 0.15
ACER3-210ENST00000531352 LTV1Q96GA3 475 aaPredicted RBP15.96■□□□□ 0.15
ACER3-210ENST00000531352 RGPD2P0DJD1 1756 aa15.96■□□□□ 0.14
ACER3-210ENST00000531352 PPM1GO15355 546 aaPredicted RBP15.95■□□□□ 0.14
ACER3-210ENST00000531352 CSB-PGBD3P0DP91 1061 aa15.95■□□□□ 0.14
ACER3-210ENST00000531352 SEPT12Q8IYM1 358 aa15.95■□□□□ 0.14
ACER3-210ENST00000531352 ZNF316A6NFI3 1004 aaPredicted RBP15.94■□□□□ 0.14
ACER3-210ENST00000531352 BLMP54132 1417 aaPredicted RBP15.94■□□□□ 0.14
ACER3-210ENST00000531352 TCP11L2Q8N4U5 519 aa15.93■□□□□ 0.14
ACER3-210ENST00000531352 CARD10Q9BWT7 1032 aa15.93■□□□□ 0.14
ACER3-210ENST00000531352 RTL1A6NKG5 1358 aa15.93■□□□□ 0.14
ACER3-210ENST00000531352 FLT4P35916 1363 aa15.92■□□□□ 0.14
ACER3-210ENST00000531352 NPC1L1Q9UHC9 1359 aa15.92■□□□□ 0.14
ACER3-210ENST00000531352 THSD7AQ9UPZ6 1657 aa15.92■□□□□ 0.14
ACER3-210ENST00000531352 A0A0G2JS52 829 aa15.91■□□□□ 0.14
ACER3-210ENST00000531352 MYT1Q01538 1121 aa15.91■□□□□ 0.14
ACER3-210ENST00000531352 BARGINQ6ZT62 677 aa15.91■□□□□ 0.14
ACER3-210ENST00000531352 NLRP2Q9NX02 1062 aa15.91■□□□□ 0.14
ACER3-210ENST00000531352 INSRP06213 1382 aa15.91■□□□□ 0.14
ACER3-210ENST00000531352 KIF24Q5T7B8 1368 aa15.9■□□□□ 0.14
ACER3-210ENST00000531352 NBPF6Q5VWK0 638 aa15.9■□□□□ 0.14
ACER3-210ENST00000531352 NBPF4Q96M43 638 aa15.9■□□□□ 0.14
ACER3-210ENST00000531352 THRAP3Q9Y2W1 955 aaKnown RBP15.9■□□□□ 0.14
ACER3-210ENST00000531352 FAM182BQ5T319 152 aa15.89■□□□□ 0.13
ACER3-210ENST00000531352 SOCS7O14512 581 aa15.88■□□□□ 0.13
ACER3-210ENST00000531352 USHBP1Q8N6Y0 703 aa15.88■□□□□ 0.13
ACER3-210ENST00000531352 WNK3Q9BYP7 1800 aa15.87■□□□□ 0.13
ACER3-210ENST00000531352 SMG6Q86US8 1419 aaKnown RBP15.87■□□□□ 0.13
ACER3-210ENST00000531352 MTHFSP49914 203 aa15.87■□□□□ 0.13
ACER3-210ENST00000531352 KRT27Q7Z3Y8 459 aa15.87■□□□□ 0.13
ACER3-210ENST00000531352 DISP2A7MBM2 1401 aa15.86■□□□□ 0.13
ACER3-210ENST00000531352 FAM208AQ9UK61 1670 aaKnown RBP15.86■□□□□ 0.13
ACER3-210ENST00000531352 PARP4Q9UKK3 1724 aaKnown RBP15.86■□□□□ 0.13
ACER3-210ENST00000531352 EIF4A2Q14240 407 aaKnown RBP15.86■□□□□ 0.13
ACER3-210ENST00000531352 EYA1Q99502 592 aa15.83■□□□□ 0.13
ACER3-210ENST00000531352 LRRC37A3O60309 1634 aa15.83■□□□□ 0.13
ACER3-210ENST00000531352 IL2RBP14784 551 aa15.82■□□□□ 0.12
ACER3-210ENST00000531352 DDB1Q16531 1140 aa15.82■□□□□ 0.12
ACER3-210ENST00000531352 UPF1Q92900 1129 aaKnown RBP eCLIP15.82■□□□□ 0.12
ACER3-210ENST00000531352 PPP2R1AP30153 589 aa15.82■□□□□ 0.12
ACER3-210ENST00000531352 MEGF6O75095 1541 aa15.81■□□□□ 0.12
ACER3-210ENST00000531352 PDE3BQ13370 1112 aa15.81■□□□□ 0.12
ACER3-210ENST00000531352 CDCA7Q9BWT1 371 aaPredicted RBP15.8■□□□□ 0.12
ACER3-210ENST00000531352 PARD3Q8TEW0 1356 aa15.8■□□□□ 0.12
ACER3-210ENST00000531352 IL13P35225 146 aa15.8■□□□□ 0.12
ACER3-210ENST00000531352 MARCH10Q8NA82 808 aaPredicted RBP15.8■□□□□ 0.12
ACER3-210ENST00000531352 EXOC5O00471 708 aa15.79■□□□□ 0.12
ACER3-210ENST00000531352 NCAPD2Q15021 1401 aa15.79■□□□□ 0.12
ACER3-210ENST00000531352 KAT6BQ8WYB5 2073 aa15.79■□□□□ 0.12
ACER3-210ENST00000531352 IGSF1Q8N6C5 1336 aa15.78■□□□□ 0.12
ACER3-210ENST00000531352 AEBP1Q8IUX7 1158 aa15.77■□□□□ 0.12
ACER3-210ENST00000531352 COL3A1P02461 1466 aaPredicted RBP15.77■□□□□ 0.12
ACER3-210ENST00000531352 RGPD1P0DJD0 1748 aa15.77■□□□□ 0.11
ACER3-210ENST00000531352 TNS2Q63HR2 1409 aa15.77■□□□□ 0.11
ACER3-210ENST00000531352 SHANK3Q9BYB0 1731 aa15.76■□□□□ 0.11
ACER3-210ENST00000531352 OVOS2A0A0G2JMS6 1433 aa15.76■□□□□ 0.11
ACER3-210ENST00000531352 RAPGEF4Q8WZA2 1011 aa15.75■□□□□ 0.11
ACER3-210ENST00000531352 DIAPH1O60610 1272 aaKnown RBP15.75■□□□□ 0.11
ACER3-210ENST00000531352 FAM196AQ6ZSG2 479 aa15.75■□□□□ 0.11
ACER3-210ENST00000531352 SBF2Q86WG5 1849 aa15.75■□□□□ 0.11
ACER3-210ENST00000531352 PTF1AQ7RTS3 328 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms