RNA–Protein interactions for RNA: ENST00000529173.5

RPS3-212, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 1,373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-212ENST00000529173 IFT57Q9NWB7 429 aa17.06■□□□□ 0.32
RPS3-212ENST00000529173 KIF16BQ96L93 1317 aa17.06■□□□□ 0.32
RPS3-212ENST00000529173 RTL1A6NKG5 1358 aa17.06■□□□□ 0.32
RPS3-212ENST00000529173 C20orf194Q5TEA3 1177 aa17.05■□□□□ 0.32
RPS3-212ENST00000529173 PMFBP1Q8TBY8 1022 aa17.05■□□□□ 0.32
RPS3-212ENST00000529173 ALDH1L2Q3SY69 923 aa17.04■□□□□ 0.32
RPS3-212ENST00000529173 PHF8Q9UPP1 1060 aa17.04■□□□□ 0.32
RPS3-212ENST00000529173 KIF1AQ12756 1690 aa17.04■□□□□ 0.32
RPS3-212ENST00000529173 PEAK1Q9H792 1746 aa17.04■□□□□ 0.32
RPS3-212ENST00000529173 IPO8O15397 1037 aaKnown RBP17.03■□□□□ 0.32
RPS3-212ENST00000529173 EIF4A2Q14240 407 aaKnown RBP17.03■□□□□ 0.32
RPS3-212ENST00000529173 ZKSCAN2Q63HK3 967 aa17.03■□□□□ 0.32
RPS3-212ENST00000529173 HMOX1P09601 288 aa17.02■□□□□ 0.32
RPS3-212ENST00000529173 KDM2BQ8NHM5 1336 aa17.02■□□□□ 0.32
RPS3-212ENST00000529173 NCOA3Q9Y6Q9 1424 aa17.02■□□□□ 0.32
RPS3-212ENST00000529173 SMC4Q9NTJ3 1288 aa17.02■□□□□ 0.31
RPS3-212ENST00000529173 MAP3K19Q56UN5 1328 aa17.01■□□□□ 0.31
RPS3-212ENST00000529173 AMPHP49418 695 aa17.01■□□□□ 0.31
RPS3-212ENST00000529173 EXOSC9Q06265 439 aaKnown RBP17.01■□□□□ 0.31
RPS3-212ENST00000529173 FRAT1Q92837 279 aaPredicted RBP17.01■□□□□ 0.31
RPS3-212ENST00000529173 CLUAP1Q96AJ1 413 aa17.01■□□□□ 0.31
RPS3-212ENST00000529173 CHMP4BQ9H444 224 aaKnown RBP17.01■□□□□ 0.31
RPS3-212ENST00000529173 DLG5Q8TDM6 1919 aa17■□□□□ 0.31
RPS3-212ENST00000529173 FBLN1P23142 703 aa17■□□□□ 0.31
RPS3-212ENST00000529173 BRPF1P55201 1214 aaPredicted RBP17■□□□□ 0.31
RPS3-212ENST00000529173 NLRP6P59044 892 aa17■□□□□ 0.31
RPS3-212ENST00000529173 C14orf37Q86TY3 774 aa17■□□□□ 0.31
RPS3-212ENST00000529173 FTSJ3Q8IY81 847 aaKnown RBP17■□□□□ 0.31
RPS3-212ENST00000529173 DCCP43146 1447 aa16.99■□□□□ 0.31
RPS3-212ENST00000529173 KDRP35968 1356 aa16.99■□□□□ 0.31
RPS3-212ENST00000529173 TSR2Q969E8 191 aaKnown RBP16.99■□□□□ 0.31
RPS3-212ENST00000529173 MARF1Q9Y4F3 1742 aaKnown RBP16.98■□□□□ 0.31
RPS3-212ENST00000529173 PHRF1Q9P1Y6 1649 aaKnown RBP16.98■□□□□ 0.31
RPS3-212ENST00000529173 SULT6B1Q6IMI4 303 aa16.98■□□□□ 0.31
RPS3-212ENST00000529173 ABTB2Q8N961 1025 aa16.98■□□□□ 0.31
RPS3-212ENST00000529173 KCNH5Q8NCM2 988 aa16.98■□□□□ 0.31
RPS3-212ENST00000529173 PHACTR3Q96KR7 559 aa16.98■□□□□ 0.31
RPS3-212ENST00000529173 CFAP44Q96MT7 982 aa16.98■□□□□ 0.31
RPS3-212ENST00000529173 DZIP1LQ8IYY4 767 aaKnown RBP16.97■□□□□ 0.31
RPS3-212ENST00000529173 IGSF1Q8N6C5 1336 aa16.96■□□□□ 0.31
RPS3-212ENST00000529173 ZNF853P0CG23 659 aa16.96■□□□□ 0.31
RPS3-212ENST00000529173 GAS2L2Q8NHY3 880 aa16.96■□□□□ 0.31
RPS3-212ENST00000529173 MVPQ14764 893 aaKnown RBP16.95■□□□□ 0.3
RPS3-212ENST00000529173 HSP90AB2PQ58FF8 381 aa16.95■□□□□ 0.3
RPS3-212ENST00000529173 DDX19BQ9UMR2 479 aa16.95■□□□□ 0.3
RPS3-212ENST00000529173 HTATSF1O43719 755 aaKnown RBP16.94■□□□□ 0.3
RPS3-212ENST00000529173 PAK3O75914 559 aaPredicted RBP16.94■□□□□ 0.3
RPS3-212ENST00000529173 PSME1Q06323 249 aa16.94■□□□□ 0.3
RPS3-212ENST00000529173 ATF7IPQ6VMQ6 1270 aa16.94■□□□□ 0.3
RPS3-212ENST00000529173 PANK1Q8TE04 598 aa16.94■□□□□ 0.3
RPS3-212ENST00000529173 COG6Q9Y2V7 657 aa16.94■□□□□ 0.3
RPS3-212ENST00000529173 ESCO1Q5FWF5 840 aa16.93■□□□□ 0.3
RPS3-212ENST00000529173 SSH1Q8WYL5 1049 aa16.93■□□□□ 0.3
RPS3-212ENST00000529173 ARHGAP45Q92619 1136 aa16.93■□□□□ 0.3
RPS3-212ENST00000529173 MST1RQ04912 1400 aa16.93■□□□□ 0.3
RPS3-212ENST00000529173 NFAT5O94916 1531 aa16.92■□□□□ 0.3
RPS3-212ENST00000529173 PROSER2Q86WR7 435 aaPredicted RBP16.92■□□□□ 0.3
RPS3-212ENST00000529173 C19orf44Q9H6X5 657 aa16.92■□□□□ 0.3
RPS3-212ENST00000529173 LTN1O94822 1766 aa16.92■□□□□ 0.3
RPS3-212ENST00000529173 HOXC9P31274 260 aa16.91■□□□□ 0.3
RPS3-212ENST00000529173 ANP32AP39687 249 aaKnown RBP16.91■□□□□ 0.3
RPS3-212ENST00000529173 RTF1Q92541 710 aaKnown RBP16.91■□□□□ 0.3
RPS3-212ENST00000529173 BCL2L13Q9BXK5 485 aa16.91■□□□□ 0.3
RPS3-212ENST00000529173 LAS1LQ9Y4W2 734 aaKnown RBP16.91■□□□□ 0.3
RPS3-212ENST00000529173 KIAA0232Q92628 1395 aa16.91■□□□□ 0.3
RPS3-212ENST00000529173 SLIT3O75094 1523 aa16.91■□□□□ 0.3
RPS3-212ENST00000529173 SOX12O15370 315 aa16.9■□□□□ 0.3
RPS3-212ENST00000529173 RWDD1Q9H446 243 aaPredicted RBP16.9■□□□□ 0.3
RPS3-212ENST00000529173 AEBP1Q8IUX7 1158 aa16.89■□□□□ 0.3
RPS3-212ENST00000529173 MBIPQ9NS73 344 aa16.89■□□□□ 0.3
RPS3-212ENST00000529173 C1orf167Q5SNV9 1468 aa16.89■□□□□ 0.29
RPS3-212ENST00000529173 TRIM27P14373 513 aa16.89■□□□□ 0.29
RPS3-212ENST00000529173 SOS1Q07889 1333 aaPredicted RBP16.88■□□□□ 0.29
RPS3-212ENST00000529173 TRPM3Q9HCF6 1732 aaPredicted RBP16.88■□□□□ 0.29
RPS3-212ENST00000529173 ATF3P18847 181 aa16.88■□□□□ 0.29
RPS3-212ENST00000529173 TWISTNBQ3B726 338 aaPredicted RBP16.88■□□□□ 0.29
RPS3-212ENST00000529173 IP6K1Q92551 441 aa16.88■□□□□ 0.29
RPS3-212ENST00000529173 API5Q9BZZ5 524 aaKnown RBP16.88■□□□□ 0.29
RPS3-212ENST00000529173 BABAM1Q9NWV8 329 aa16.88■□□□□ 0.29
RPS3-212ENST00000529173 LRRC37A3O60309 1634 aa16.87■□□□□ 0.29
RPS3-212ENST00000529173 VAMP4O75379 141 aa16.87■□□□□ 0.29
RPS3-212ENST00000529173 EYA1Q99502 592 aa16.87■□□□□ 0.29
RPS3-212ENST00000529173 NOB1Q9ULX3 412 aaKnown RBP16.87■□□□□ 0.29
RPS3-212ENST00000529173 CHL1O00533 1208 aa16.86■□□□□ 0.29
RPS3-212ENST00000529173 RLBP1P12271 317 aa16.86■□□□□ 0.29
RPS3-212ENST00000529173 PDE4AP27815 886 aa16.86■□□□□ 0.29
RPS3-212ENST00000529173 ITPRIPQ8IWB1 547 aa16.86■□□□□ 0.29
RPS3-212ENST00000529173 BACH2Q9BYV9 841 aa16.85■□□□□ 0.29
RPS3-212ENST00000529173 USP19O94966 1318 aa16.85■□□□□ 0.29
RPS3-212ENST00000529173 CRB1P82279 1406 aa16.84■□□□□ 0.29
RPS3-212ENST00000529173 CADPS2Q86UW7 1296 aa16.84■□□□□ 0.29
RPS3-212ENST00000529173 MRPL50Q8N5N7 158 aaKnown RBP16.84■□□□□ 0.29
RPS3-212ENST00000529173 THUMPD2Q9BTF0 503 aaKnown RBP16.84■□□□□ 0.29
RPS3-212ENST00000529173 CHMP4AQ9BY43 222 aa16.84■□□□□ 0.29
RPS3-212ENST00000529173 ABCC6O95255 1503 aa16.84■□□□□ 0.29
RPS3-212ENST00000529173 MAP3K5Q99683 1374 aa16.84■□□□□ 0.29
RPS3-212ENST00000529173 HDAC1Q13547 482 aaPredicted RBP16.83■□□□□ 0.28
RPS3-212ENST00000529173 MSH6P52701 1360 aa16.83■□□□□ 0.28
RPS3-212ENST00000529173 TMEM94Q12767 1356 aa16.83■□□□□ 0.28
RPS3-212ENST00000529173 GNAT3A8MTJ3 354 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms