RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 PTF1AQ7RTS3 328 aa22.06■■□□□ 1.12
CLNS1A-210ENST00000528364 NME9Q86XW9 330 aa22.06■■□□□ 1.12
CLNS1A-210ENST00000528364 TONSLQ96HA7 1378 aa22.06■■□□□ 1.12
CLNS1A-210ENST00000528364 RGPD5Q99666 1765 aa22.05■■□□□ 1.12
CLNS1A-210ENST00000528364 SBNO2Q9Y2G9 1366 aa22.04■■□□□ 1.12
CLNS1A-210ENST00000528364 PARP4Q9UKK3 1724 aaKnown RBP22.04■■□□□ 1.12
CLNS1A-210ENST00000528364 LRP5O75197 1615 aa22.03■■□□□ 1.12
CLNS1A-210ENST00000528364 MARCH10Q8NA82 808 aaPredicted RBP22.03■■□□□ 1.12
CLNS1A-210ENST00000528364 CD163L1Q9NR16 1453 aa22.03■■□□□ 1.12
CLNS1A-210ENST00000528364 CARD10Q9BWT7 1032 aa22.02■■□□□ 1.12
CLNS1A-210ENST00000528364 PARD3Q8TEW0 1356 aa22.01■■□□□ 1.11
CLNS1A-210ENST00000528364 NFAT5O94916 1531 aa22.01■■□□□ 1.11
CLNS1A-210ENST00000528364 USP31Q70CQ4 1352 aa21.99■■□□□ 1.11
CLNS1A-210ENST00000528364 HDGFL2Q7Z4V5 671 aaPredicted RBP21.99■■□□□ 1.11
CLNS1A-210ENST00000528364 PEAK1Q9H792 1746 aa21.99■■□□□ 1.11
CLNS1A-210ENST00000528364 OVOS2A0A0G2JMS6 1433 aa21.98■■□□□ 1.11
CLNS1A-210ENST00000528364 OVOS2A0A0J9YW53 1432 aa21.98■■□□□ 1.11
CLNS1A-210ENST00000528364 OVOS2Q6IE36 1432 aa21.98■■□□□ 1.11
CLNS1A-210ENST00000528364 MON2Q7Z3U7 1717 aa21.98■■□□□ 1.11
CLNS1A-210ENST00000528364 ST20-MTHFSA0A0A6YYL1 179 aa21.98■■□□□ 1.11
CLNS1A-210ENST00000528364 NBPF14Q5TI25 921 aa21.98■■□□□ 1.11
CLNS1A-210ENST00000528364 LRRC37A3O60309 1634 aa21.98■■□□□ 1.11
CLNS1A-210ENST00000528364 C11orf95C9JLR9 678 aaPredicted RBP21.97■■□□□ 1.11
CLNS1A-210ENST00000528364 TESK2Q96S53 571 aa21.97■■□□□ 1.11
CLNS1A-210ENST00000528364 CDCA7Q9BWT1 371 aaPredicted RBP21.97■■□□□ 1.11
CLNS1A-210ENST00000528364 EXOC5O00471 708 aa21.96■■□□□ 1.11
CLNS1A-210ENST00000528364 BCL11BQ9C0K0 894 aaPredicted RBP21.96■■□□□ 1.11
CLNS1A-210ENST00000528364 RREB1Q92766 1687 aa21.95■■□□□ 1.1
CLNS1A-210ENST00000528364 NUP188Q5SRE5 1749 aa21.95■■□□□ 1.1
CLNS1A-210ENST00000528364 SBF2Q86WG5 1849 aa21.95■■□□□ 1.1
CLNS1A-210ENST00000528364 NLRP2Q9NX02 1062 aa21.95■■□□□ 1.1
CLNS1A-210ENST00000528364 TERF2IPQ9NYB0 399 aa21.95■■□□□ 1.1
CLNS1A-210ENST00000528364 PLSCR1O15162 318 aa21.94■■□□□ 1.1
CLNS1A-210ENST00000528364 TRIM26Q12899 539 aaPredicted RBP21.94■■□□□ 1.1
CLNS1A-210ENST00000528364 PROM2Q8N271 834 aa21.94■■□□□ 1.1
CLNS1A-210ENST00000528364 A0A1W2PP64 1363 aa21.94■■□□□ 1.1
CLNS1A-210ENST00000528364 PUS7Q96PZ0 661 aaKnown RBP21.93■■□□□ 1.1
CLNS1A-210ENST00000528364 WNK3Q9BYP7 1800 aa21.92■■□□□ 1.1
CLNS1A-210ENST00000528364 EDC4Q6P2E9 1401 aaKnown RBP21.91■■□□□ 1.1
CLNS1A-210ENST00000528364 CCDC7Q96M83 1385 aa21.91■■□□□ 1.1
CLNS1A-210ENST00000528364 FBLN1P23142 703 aa21.91■■□□□ 1.1
CLNS1A-210ENST00000528364 ANKRD24Q8TF21 1146 aa21.91■■□□□ 1.1
CLNS1A-210ENST00000528364 ERBB3P21860 1342 aa21.9■■□□□ 1.1
CLNS1A-210ENST00000528364 KCNQ2O43526 872 aa21.9■■□□□ 1.1
CLNS1A-210ENST00000528364 ANO8Q9HCE9 1232 aaPredicted RBP21.9■■□□□ 1.1
CLNS1A-210ENST00000528364 BCL9O00512 1426 aa21.88■■□□□ 1.09
CLNS1A-210ENST00000528364 LTV1Q96GA3 475 aaPredicted RBP21.87■■□□□ 1.09
CLNS1A-210ENST00000528364 ACSBG1Q96GR2 724 aa21.87■■□□□ 1.09
CLNS1A-210ENST00000528364 USP54Q70EL1 1684 aa21.87■■□□□ 1.09
CLNS1A-210ENST00000528364 IL2RBP14784 551 aa21.86■■□□□ 1.09
CLNS1A-210ENST00000528364 PDGFDQ9GZP0 370 aaPredicted RBP21.86■■□□□ 1.09
CLNS1A-210ENST00000528364 LTN1O94822 1766 aa21.86■■□□□ 1.09
CLNS1A-210ENST00000528364 ABCC6O95255 1503 aa21.85■■□□□ 1.09
CLNS1A-210ENST00000528364 IP6K1Q92551 441 aa21.85■■□□□ 1.09
CLNS1A-210ENST00000528364 TXNRD1Q16881 649 aa21.84■■□□□ 1.09
CLNS1A-210ENST00000528364 SPON1Q9HCB6 807 aa21.84■■□□□ 1.09
CLNS1A-210ENST00000528364 KAT6BQ8WYB5 2073 aa21.83■■□□□ 1.09
CLNS1A-210ENST00000528364 TNS2Q63HR2 1409 aa21.82■■□□□ 1.08
CLNS1A-210ENST00000528364 COG3Q96JB2 828 aa21.82■■□□□ 1.08
CLNS1A-210ENST00000528364 MAP3K19Q56UN5 1328 aa21.8■■□□□ 1.08
CLNS1A-210ENST00000528364 NINLQ9Y2I6 1382 aa21.79■■□□□ 1.08
CLNS1A-210ENST00000528364 PPP1R1BQ9UD71 204 aaPredicted RBP21.79■■□□□ 1.08
CLNS1A-210ENST00000528364 RGPD3A6NKT7 1758 aaPredicted RBP21.79■■□□□ 1.08
CLNS1A-210ENST00000528364 RGPD4Q7Z3J3 1758 aa21.79■■□□□ 1.08
CLNS1A-210ENST00000528364 USP47Q96K76 1375 aa21.78■■□□□ 1.08
CLNS1A-210ENST00000528364 FYB1O15117 783 aa21.78■■□□□ 1.08
CLNS1A-210ENST00000528364 SLC24A1O60721 1099 aa21.78■■□□□ 1.08
CLNS1A-210ENST00000528364 HOXC9P31274 260 aa21.78■■□□□ 1.08
CLNS1A-210ENST00000528364 AMPHP49418 695 aa21.78■■□□□ 1.08
CLNS1A-210ENST00000528364 TMF1P82094 1093 aa21.78■■□□□ 1.08
CLNS1A-210ENST00000528364 DDX54Q8TDD1 881 aaKnown RBP21.78■■□□□ 1.08
CLNS1A-210ENST00000528364 GGNBP2Q9H3C7 697 aa21.78■■□□□ 1.08
CLNS1A-210ENST00000528364 ZBTB7AO95365 584 aa21.77■■□□□ 1.08
CLNS1A-210ENST00000528364 RRS1Q15050 365 aaKnown RBP21.77■■□□□ 1.08
CLNS1A-210ENST00000528364 STK32BQ9NY57 414 aa21.77■■□□□ 1.08
CLNS1A-210ENST00000528364 ANKRD36BQ8N2N9 1353 aa21.76■■□□□ 1.07
CLNS1A-210ENST00000528364 SLC15A2Q16348 729 aa21.76■■□□□ 1.07
CLNS1A-210ENST00000528364 ATF5Q9Y2D1 282 aaPredicted RBP21.76■■□□□ 1.07
CLNS1A-210ENST00000528364 PCGF6Q9BYE7 350 aa21.72■■□□□ 1.07
CLNS1A-210ENST00000528364 NHSQ6T4R5 1651 aa21.72■■□□□ 1.07
CLNS1A-210ENST00000528364 CASZ1Q86V15 1759 aa21.71■■□□□ 1.07
CLNS1A-210ENST00000528364 NBPF6Q5VWK0 638 aa21.71■■□□□ 1.07
CLNS1A-210ENST00000528364 NBPF4Q96M43 638 aa21.71■■□□□ 1.07
CLNS1A-210ENST00000528364 LRRC4BQ9NT99 713 aa21.71■■□□□ 1.07
CLNS1A-210ENST00000528364 RGPD2P0DJD1 1756 aa21.7■■□□□ 1.06
CLNS1A-210ENST00000528364 PTGER2P43116 358 aa21.7■■□□□ 1.06
CLNS1A-210ENST00000528364 USHBP1Q8N6Y0 703 aa21.7■■□□□ 1.06
CLNS1A-210ENST00000528364 CARD14Q9BXL6 1004 aa21.7■■□□□ 1.06
CLNS1A-210ENST00000528364 PRIM1P49642 420 aaKnown RBP21.68■■□□□ 1.06
CLNS1A-210ENST00000528364 ZCRB1Q8TBF4 217 aaKnown RBP21.68■■□□□ 1.06
CLNS1A-210ENST00000528364 BTAF1O14981 1849 aa21.68■■□□□ 1.06
CLNS1A-210ENST00000528364 KCNQ4P56696 695 aa21.67■■□□□ 1.06
CLNS1A-210ENST00000528364 ZNF827Q17R98 1081 aa21.67■■□□□ 1.06
CLNS1A-210ENST00000528364 HSP90AB2PQ58FF8 381 aa21.67■■□□□ 1.06
CLNS1A-210ENST00000528364 SYTL4Q96C24 671 aaPredicted RBP21.67■■□□□ 1.06
CLNS1A-210ENST00000528364 CDCA8Q53HL2 280 aa21.66■■□□□ 1.06
CLNS1A-210ENST00000528364 MEGF6O75095 1541 aa21.65■■□□□ 1.06
CLNS1A-210ENST00000528364 FAM208AQ9UK61 1670 aaKnown RBP21.64■■□□□ 1.05
CLNS1A-210ENST00000528364 MTFR1LQ9H019 292 aa21.63■■□□□ 1.05
CLNS1A-210ENST00000528364 RTL1A6NKG5 1358 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms