RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ZBTB7CA1YPR0 619 aa16.89■□□□□ 0.29
TRAPPC4-209ENST00000528230 MYT1Q01538 1121 aa16.89■□□□□ 0.29
TRAPPC4-209ENST00000528230 TCP11L2Q8N4U5 519 aa16.89■□□□□ 0.29
TRAPPC4-209ENST00000528230 ABCC6O95255 1503 aa16.89■□□□□ 0.29
TRAPPC4-209ENST00000528230 RGPD5Q99666 1765 aa16.89■□□□□ 0.29
TRAPPC4-209ENST00000528230 AXIN2Q9Y2T1 843 aa16.88■□□□□ 0.29
TRAPPC4-209ENST00000528230 CRB1P82279 1406 aa16.87■□□□□ 0.29
TRAPPC4-209ENST00000528230 SOX12O15370 315 aa16.87■□□□□ 0.29
TRAPPC4-209ENST00000528230 USP35Q9P2H5 1018 aa16.87■□□□□ 0.29
TRAPPC4-209ENST00000528230 OVOS2A0A0J9YW53 1432 aa16.87■□□□□ 0.29
TRAPPC4-209ENST00000528230 OVOS2Q6IE36 1432 aa16.87■□□□□ 0.29
TRAPPC4-209ENST00000528230 LTN1O94822 1766 aa16.86■□□□□ 0.29
TRAPPC4-209ENST00000528230 COG3Q96JB2 828 aa16.85■□□□□ 0.29
TRAPPC4-209ENST00000528230 WDR17Q8IZU2 1322 aa16.85■□□□□ 0.29
TRAPPC4-209ENST00000528230 BLMP54132 1417 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC4-209ENST00000528230 HSPA5P11021 654 aaKnown RBP16.84■□□□□ 0.29
TRAPPC4-209ENST00000528230 TOM1L2Q6ZVM7 507 aa16.84■□□□□ 0.29
TRAPPC4-209ENST00000528230 MYOM1P52179 1685 aa16.84■□□□□ 0.29
TRAPPC4-209ENST00000528230 PARP4Q9UKK3 1724 aaKnown RBP16.82■□□□□ 0.28
TRAPPC4-209ENST00000528230 FYB1O15117 783 aa16.82■□□□□ 0.28
TRAPPC4-209ENST00000528230 CARD10Q9BWT7 1032 aa16.82■□□□□ 0.28
TRAPPC4-209ENST00000528230 PDE3BQ13370 1112 aa16.81■□□□□ 0.28
TRAPPC4-209ENST00000528230 SF3B2Q13435 895 aaKnown RBP16.81■□□□□ 0.28
TRAPPC4-209ENST00000528230 CDCA7Q9BWT1 371 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC4-209ENST00000528230 CSB-PGBD3P0DP91 1061 aa16.8■□□□□ 0.28
TRAPPC4-209ENST00000528230 FAM196AQ6ZSG2 479 aa16.8■□□□□ 0.28
TRAPPC4-209ENST00000528230 KIF20BQ96Q89 1820 aa16.8■□□□□ 0.28
TRAPPC4-209ENST00000528230 IP6K1Q92551 441 aa16.79■□□□□ 0.28
TRAPPC4-209ENST00000528230 CARD14Q9BXL6 1004 aa16.79■□□□□ 0.28
TRAPPC4-209ENST00000528230 WNK3Q9BYP7 1800 aa16.79■□□□□ 0.28
TRAPPC4-209ENST00000528230 CCDC7Q96M83 1385 aa16.78■□□□□ 0.28
TRAPPC4-209ENST00000528230 EP400Q96L91 3159 aa16.78■□□□□ 0.28
TRAPPC4-209ENST00000528230 C11orf95C9JLR9 678 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC4-209ENST00000528230 RGPD1P0DJD0 1748 aa16.78■□□□□ 0.28
TRAPPC4-209ENST00000528230 ERBB3P21860 1342 aa16.77■□□□□ 0.28
TRAPPC4-209ENST00000528230 FAM182BQ5T319 152 aa16.77■□□□□ 0.28
TRAPPC4-209ENST00000528230 GGNBP2Q9H3C7 697 aa16.77■□□□□ 0.28
TRAPPC4-209ENST00000528230 MAP3K19Q56UN5 1328 aa16.75■□□□□ 0.27
TRAPPC4-209ENST00000528230 DDB1Q16531 1140 aa16.75■□□□□ 0.27
TRAPPC4-209ENST00000528230 ANKRD24Q8TF21 1146 aa16.75■□□□□ 0.27
TRAPPC4-209ENST00000528230 NSD3Q9BZ95 1437 aa16.75■□□□□ 0.27
TRAPPC4-209ENST00000528230 BAG6P46379 1132 aa16.74■□□□□ 0.27
TRAPPC4-209ENST00000528230 AMPHP49418 695 aa16.74■□□□□ 0.27
TRAPPC4-209ENST00000528230 POLR3GLQ9BT43 218 aa16.74■□□□□ 0.27
TRAPPC4-209ENST00000528230 FAM208AQ9UK61 1670 aaKnown RBP16.74■□□□□ 0.27
TRAPPC4-209ENST00000528230 LRRC37A3O60309 1634 aa16.74■□□□□ 0.27
TRAPPC4-209ENST00000528230 CGNL1Q0VF96 1302 aa16.73■□□□□ 0.27
TRAPPC4-209ENST00000528230 DISP2A7MBM2 1401 aa16.73■□□□□ 0.27
TRAPPC4-209ENST00000528230 HOXC9P31274 260 aa16.73■□□□□ 0.27
TRAPPC4-209ENST00000528230 DEFB132Q7Z7B7 95 aa16.73■□□□□ 0.27
TRAPPC4-209ENST00000528230 NLRP2Q9NX02 1062 aa16.73■□□□□ 0.27
TRAPPC4-209ENST00000528230 EXOC5O00471 708 aa16.72■□□□□ 0.27
TRAPPC4-209ENST00000528230 FBLN1P23142 703 aa16.72■□□□□ 0.27
TRAPPC4-209ENST00000528230 TNS1Q9HBL0 1735 aaKnown RBP16.72■□□□□ 0.27
TRAPPC4-209ENST00000528230 RTL1A6NKG5 1358 aa16.72■□□□□ 0.27
TRAPPC4-209ENST00000528230 KIF24Q5T7B8 1368 aa16.72■□□□□ 0.27
TRAPPC4-209ENST00000528230 TRIM37O94972 964 aa16.71■□□□□ 0.27
TRAPPC4-209ENST00000528230 PEAK1Q9H792 1746 aa16.7■□□□□ 0.26
TRAPPC4-209ENST00000528230 RRS1Q15050 365 aaKnown RBP16.7■□□□□ 0.26
TRAPPC4-209ENST00000528230 PANK3Q9H999 370 aa16.7■□□□□ 0.26
TRAPPC4-209ENST00000528230 SBF2Q86WG5 1849 aa16.7■□□□□ 0.26
TRAPPC4-209ENST00000528230 OVOS2A0A0G2JMS6 1433 aa16.7■□□□□ 0.26
TRAPPC4-209ENST00000528230 BCL9O00512 1426 aa16.7■□□□□ 0.26
TRAPPC4-209ENST00000528230 IL2RBP14784 551 aa16.69■□□□□ 0.26
TRAPPC4-209ENST00000528230 MAP2P11137 1827 aaKnown RBP16.68■□□□□ 0.26
TRAPPC4-209ENST00000528230 ANKRD26Q9UPS8 1709 aa16.68■□□□□ 0.26
TRAPPC4-209ENST00000528230 MARCH10Q8NA82 808 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC4-209ENST00000528230 LTV1Q96GA3 475 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC4-209ENST00000528230 EN1Q05925 392 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC4-209ENST00000528230 RGPD2P0DJD1 1756 aa16.66■□□□□ 0.26
TRAPPC4-209ENST00000528230 INSRP06213 1382 aa16.66■□□□□ 0.26
TRAPPC4-209ENST00000528230 FLT4P35916 1363 aa16.66■□□□□ 0.26
TRAPPC4-209ENST00000528230 APBA3O96018 575 aa16.66■□□□□ 0.26
TRAPPC4-209ENST00000528230 TNS2Q63HR2 1409 aa16.66■□□□□ 0.26
TRAPPC4-209ENST00000528230 PARD3Q8TEW0 1356 aa16.65■□□□□ 0.26
TRAPPC4-209ENST00000528230 CAMKK2Q96RR4 588 aa16.65■□□□□ 0.26
TRAPPC4-209ENST00000528230 KIF7Q2M1P5 1343 aa16.65■□□□□ 0.26
TRAPPC4-209ENST00000528230 NSD2O96028 1365 aa16.64■□□□□ 0.26
TRAPPC4-209ENST00000528230 SMG6Q86US8 1419 aaKnown RBP16.64■□□□□ 0.25
TRAPPC4-209ENST00000528230 HSP90AB2PQ58FF8 381 aa16.64■□□□□ 0.25
TRAPPC4-209ENST00000528230 POTEDQ86YR6 584 aa16.63■□□□□ 0.25
TRAPPC4-209ENST00000528230 BCL11BQ9C0K0 894 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC4-209ENST00000528230 EZH2Q15910 746 aaKnown RBP16.62■□□□□ 0.25
TRAPPC4-209ENST00000528230 NBPF6Q5VWK0 638 aa16.62■□□□□ 0.25
TRAPPC4-209ENST00000528230 NBPF4Q96M43 638 aa16.62■□□□□ 0.25
TRAPPC4-209ENST00000528230 KNSTRNQ9Y448 316 aa16.62■□□□□ 0.25
TRAPPC4-209ENST00000528230 EMILIN1Q9Y6C2 1016 aa16.62■□□□□ 0.25
TRAPPC4-209ENST00000528230 WASHC2AQ641Q2 1341 aa16.62■□□□□ 0.25
TRAPPC4-209ENST00000528230 PLSCR1O15162 318 aa16.61■□□□□ 0.25
TRAPPC4-209ENST00000528230 POLKQ9UBT6 870 aa16.61■□□□□ 0.25
TRAPPC4-209ENST00000528230 RGPD3A6NKT7 1758 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC4-209ENST00000528230 RGPD4Q7Z3J3 1758 aa16.6■□□□□ 0.25
TRAPPC4-209ENST00000528230 KAT6BQ8WYB5 2073 aa16.59■□□□□ 0.25
TRAPPC4-209ENST00000528230 PPM1GO15355 546 aaPredicted RBP16.59■□□□□ 0.25
TRAPPC4-209ENST00000528230 RREB1Q92766 1687 aa16.59■□□□□ 0.25
TRAPPC4-209ENST00000528230 ZCRB1Q8TBF4 217 aaKnown RBP16.58■□□□□ 0.24
TRAPPC4-209ENST00000528230 PER1O15534 1290 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC4-209ENST00000528230 MORC1Q86VD1 984 aa16.57■□□□□ 0.24
TRAPPC4-209ENST00000528230 RAPGEF4Q8WZA2 1011 aa16.57■□□□□ 0.24
TRAPPC4-209ENST00000528230 NHSQ6T4R5 1651 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms