RNA–Protein interactions for RNA: ENST00000527792.5

LTBP3-209, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-209ENST00000527792 CCDC9Q9Y3X0 531 aaKnown RBP20.73■□□□□ 0.91
LTBP3-209ENST00000527792 RRS1Q15050 365 aaKnown RBP20.72■□□□□ 0.91
LTBP3-209ENST00000527792 VPS72Q15906 364 aa20.72■□□□□ 0.91
LTBP3-209ENST00000527792 DEFB132Q7Z7B7 95 aa20.72■□□□□ 0.91
LTBP3-209ENST00000527792 SLIT3O75094 1523 aa20.72■□□□□ 0.91
LTBP3-209ENST00000527792 ZC3H6P61129 1189 aaKnown RBP20.71■□□□□ 0.91
LTBP3-209ENST00000527792 PHRF1Q9P1Y6 1649 aaKnown RBP20.71■□□□□ 0.91
LTBP3-209ENST00000527792 EP400Q96L91 3159 aa20.71■□□□□ 0.91
LTBP3-209ENST00000527792 BLMP54132 1417 aaPredicted RBP20.7■□□□□ 0.9
LTBP3-209ENST00000527792 ONECUT3O60422 494 aaPredicted RBP20.7■□□□□ 0.9
LTBP3-209ENST00000527792 MTHFSP49914 203 aa20.7■□□□□ 0.9
LTBP3-209ENST00000527792 SF3B2Q13435 895 aaKnown RBP20.7■□□□□ 0.9
LTBP3-209ENST00000527792 AATKQ6ZMQ8 1374 aa20.7■□□□□ 0.9
LTBP3-209ENST00000527792 FAM83GA6ND36 823 aa20.69■□□□□ 0.9
LTBP3-209ENST00000527792 AMPHP49418 695 aa20.69■□□□□ 0.9
LTBP3-209ENST00000527792 POLKQ9UBT6 870 aa20.69■□□□□ 0.9
LTBP3-209ENST00000527792 EMILIN1Q9Y6C2 1016 aa20.69■□□□□ 0.9
LTBP3-209ENST00000527792 GLI3P10071 1580 aa20.68■□□□□ 0.9
LTBP3-209ENST00000527792 MAP2P11137 1827 aaKnown RBP20.67■□□□□ 0.9
LTBP3-209ENST00000527792 KRT27Q7Z3Y8 459 aa20.67■□□□□ 0.9
LTBP3-209ENST00000527792 CFAP53Q96M91 514 aa20.67■□□□□ 0.9
LTBP3-209ENST00000527792 MAP3K19Q56UN5 1328 aa20.67■□□□□ 0.9
LTBP3-209ENST00000527792 NFAT5O94916 1531 aa20.67■□□□□ 0.9
LTBP3-209ENST00000527792 CRYBG1Q9Y4K1 1723 aa20.67■□□□□ 0.9
LTBP3-209ENST00000527792 ABCA3Q99758 1704 aa20.66■□□□□ 0.9
LTBP3-209ENST00000527792 MRS2Q9HD23 443 aa20.65■□□□□ 0.9
LTBP3-209ENST00000527792 ARHGEF25Q86VW2 580 aa20.64■□□□□ 0.89
LTBP3-209ENST00000527792 LTN1O94822 1766 aa20.64■□□□□ 0.89
LTBP3-209ENST00000527792 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.64■□□□□ 0.89
LTBP3-209ENST00000527792 KIAA0232Q92628 1395 aa20.63■□□□□ 0.89
LTBP3-209ENST00000527792 A0A0G2JS52 829 aa20.63■□□□□ 0.89
LTBP3-209ENST00000527792 CCER2I3L3R5 266 aa20.63■□□□□ 0.89
LTBP3-209ENST00000527792 MYT1Q01538 1121 aa20.63■□□□□ 0.89
LTBP3-209ENST00000527792 PRDM11Q9NQV5 511 aa20.63■□□□□ 0.89
LTBP3-209ENST00000527792 CHRNA2Q15822 529 aa20.62■□□□□ 0.89
LTBP3-209ENST00000527792 CCDC184Q52MB2 194 aa20.62■□□□□ 0.89
LTBP3-209ENST00000527792 HOXC9P31274 260 aa20.61■□□□□ 0.89
LTBP3-209ENST00000527792 FLT4P35916 1363 aa20.6■□□□□ 0.89
LTBP3-209ENST00000527792 FAM98CQ17RN3 349 aaKnown RBP20.6■□□□□ 0.89
LTBP3-209ENST00000527792 IP6K1Q92551 441 aa20.6■□□□□ 0.89
LTBP3-209ENST00000527792 BTG4Q9NY30 223 aa20.6■□□□□ 0.89
LTBP3-209ENST00000527792 SMG6Q86US8 1419 aaKnown RBP20.6■□□□□ 0.89
LTBP3-209ENST00000527792 CPDO75976 1380 aa20.59■□□□□ 0.89
LTBP3-209ENST00000527792 PEAK1Q9H792 1746 aa20.59■□□□□ 0.89
LTBP3-209ENST00000527792 HSP90AB2PQ58FF8 381 aa20.59■□□□□ 0.89
LTBP3-209ENST00000527792 LTV1Q96GA3 475 aaPredicted RBP20.59■□□□□ 0.89
LTBP3-209ENST00000527792 RTL1A6NKG5 1358 aa20.59■□□□□ 0.89
LTBP3-209ENST00000527792 KIF24Q5T7B8 1368 aa20.59■□□□□ 0.89
LTBP3-209ENST00000527792 DIAPH1O60610 1272 aaKnown RBP20.57■□□□□ 0.88
LTBP3-209ENST00000527792 BRWD3Q6RI45 1802 aa20.57■□□□□ 0.88
LTBP3-209ENST00000527792 BAG6P46379 1132 aa20.56■□□□□ 0.88
LTBP3-209ENST00000527792 NUDCQ9Y266 331 aa20.55■□□□□ 0.88
LTBP3-209ENST00000527792 INSRP06213 1382 aa20.55■□□□□ 0.88
LTBP3-209ENST00000527792 PSDA5PKW4 1024 aaPredicted RBP20.54■□□□□ 0.88
LTBP3-209ENST00000527792 U2SURPO15042 1029 aaKnown RBP20.54■□□□□ 0.88
LTBP3-209ENST00000527792 WDR43Q15061 677 aaKnown RBP eCLIP20.54■□□□□ 0.88
LTBP3-209ENST00000527792 FAM182BQ5T319 152 aa20.54■□□□□ 0.88
LTBP3-209ENST00000527792 AXIN2Q9Y2T1 843 aa20.54■□□□□ 0.88
LTBP3-209ENST00000527792 CSB-PGBD3P0DP91 1061 aa20.53■□□□□ 0.88
LTBP3-209ENST00000527792 EVA1CP58658 441 aa20.53■□□□□ 0.88
LTBP3-209ENST00000527792 EIF4A2Q14240 407 aaKnown RBP20.53■□□□□ 0.88
LTBP3-209ENST00000527792 ANKRD24Q8TF21 1146 aa20.53■□□□□ 0.88
LTBP3-209ENST00000527792 COL14A1Q05707 1796 aaKnown RBP20.52■□□□□ 0.88
LTBP3-209ENST00000527792 FAM9BQ8IZU0 186 aa20.52■□□□□ 0.88
LTBP3-209ENST00000527792 COL18A1P39060 1754 aa20.51■□□□□ 0.87
LTBP3-209ENST00000527792 RGPD5Q99666 1765 aa20.51■□□□□ 0.87
LTBP3-209ENST00000527792 COL3A1P02461 1466 aaPredicted RBP20.51■□□□□ 0.87
LTBP3-209ENST00000527792 IL13P35225 146 aa20.51■□□□□ 0.87
LTBP3-209ENST00000527792 EN1Q05925 392 aaPredicted RBP20.51■□□□□ 0.87
LTBP3-209ENST00000527792 STRN4Q9NRL3 753 aa20.51■□□□□ 0.87
LTBP3-209ENST00000527792 SPATA31A5Q5VU36 1347 aa20.51■□□□□ 0.87
LTBP3-209ENST00000527792 SPATA31A7Q8IWB4 1347 aa20.51■□□□□ 0.87
LTBP3-209ENST00000527792 NWD2Q9ULI1 1742 aa20.5■□□□□ 0.87
LTBP3-209ENST00000527792 ABCC6O95255 1503 aa20.5■□□□□ 0.87
LTBP3-209ENST00000527792 PLCH1Q4KWH8 1693 aa20.5■□□□□ 0.87
LTBP3-209ENST00000527792 U2AF1L5P0DN76 240 aaPredicted RBP20.49■□□□□ 0.87
LTBP3-209ENST00000527792 U2AF1Q01081 240 aaKnown RBP eCLIP20.49■□□□□ 0.87
LTBP3-209ENST00000527792 LMO7Q8WWI1 1683 aa20.48■□□□□ 0.87
LTBP3-209ENST00000527792 CAMTA1Q9Y6Y1 1673 aa20.48■□□□□ 0.87
LTBP3-209ENST00000527792 PNISRQ8TF01 805 aaKnown RBP20.48■□□□□ 0.87
LTBP3-209ENST00000527792 ERBB3P21860 1342 aa20.47■□□□□ 0.87
LTBP3-209ENST00000527792 NLRP2Q9NX02 1062 aa20.46■□□□□ 0.87
LTBP3-209ENST00000527792 COL5A2P05997 1499 aaPredicted RBP20.45■□□□□ 0.86
LTBP3-209ENST00000527792 TOM1L2Q6ZVM7 507 aa20.45■□□□□ 0.86
LTBP3-209ENST00000527792 EYA1Q99502 592 aa20.45■□□□□ 0.86
LTBP3-209ENST00000527792 HMOX1P09601 288 aa20.44■□□□□ 0.86
LTBP3-209ENST00000527792 ADAMTS8Q9UP79 889 aa20.44■□□□□ 0.86
LTBP3-209ENST00000527792 R3HDM1Q15032 1099 aaKnown RBP20.43■□□□□ 0.86
LTBP3-209ENST00000527792 NBPF6Q5VWK0 638 aa20.43■□□□□ 0.86
LTBP3-209ENST00000527792 SULT6B1Q6IMI4 303 aa20.43■□□□□ 0.86
LTBP3-209ENST00000527792 LARP1Q6PKG0 1096 aaKnown RBP20.43■□□□□ 0.86
LTBP3-209ENST00000527792 USHBP1Q8N6Y0 703 aa20.43■□□□□ 0.86
LTBP3-209ENST00000527792 NBPF4Q96M43 638 aa20.43■□□□□ 0.86
LTBP3-209ENST00000527792 WDR17Q8IZU2 1322 aa20.43■□□□□ 0.86
LTBP3-209ENST00000527792 EZH2Q15910 746 aaKnown RBP20.42■□□□□ 0.86
LTBP3-209ENST00000527792 SPATA31A1Q5TZJ5 1347 aa20.42■□□□□ 0.86
LTBP3-209ENST00000527792 TRIM37O94972 964 aa20.41■□□□□ 0.86
LTBP3-209ENST00000527792 RGPD2P0DJD1 1756 aa20.41■□□□□ 0.86
LTBP3-209ENST00000527792 FAM196AQ6ZSG2 479 aa20.4■□□□□ 0.86
LTBP3-209ENST00000527792 NRAPQ86VF7 1730 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms