RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 THSD7AQ9UPZ6 1657 aa24.37■■□□□ 1.49
NR1H3-228ENST00000525441 CRB1P82279 1406 aa24.37■■□□□ 1.49
NR1H3-228ENST00000525441 OVOS2A0A0J9YW53 1432 aa24.36■■□□□ 1.49
NR1H3-228ENST00000525441 OVOS2Q6IE36 1432 aa24.36■■□□□ 1.49
NR1H3-228ENST00000525441 ABCC6O95255 1503 aa24.36■■□□□ 1.49
NR1H3-228ENST00000525441 COG3Q96JB2 828 aa24.36■■□□□ 1.49
NR1H3-228ENST00000525441 AXIN2Q9Y2T1 843 aa24.36■■□□□ 1.49
NR1H3-228ENST00000525441 COL18A1P39060 1754 aa24.36■■□□□ 1.49
NR1H3-228ENST00000525441 HSPA5P11021 654 aaKnown RBP24.35■■□□□ 1.49
NR1H3-228ENST00000525441 TOM1L2Q6ZVM7 507 aa24.35■■□□□ 1.49
NR1H3-228ENST00000525441 BLMP54132 1417 aaPredicted RBP24.35■■□□□ 1.49
NR1H3-228ENST00000525441 WDR17Q8IZU2 1322 aa24.35■■□□□ 1.49
NR1H3-228ENST00000525441 CSB-PGBD3P0DP91 1061 aa24.34■■□□□ 1.49
NR1H3-228ENST00000525441 SF3B2Q13435 895 aaKnown RBP24.33■■□□□ 1.49
NR1H3-228ENST00000525441 EP400Q96L91 3159 aa24.3■■□□□ 1.48
NR1H3-228ENST00000525441 PDE3BQ13370 1112 aa24.3■■□□□ 1.48
NR1H3-228ENST00000525441 POLR3GLQ9BT43 218 aa24.3■■□□□ 1.48
NR1H3-228ENST00000525441 CARD10Q9BWT7 1032 aa24.28■■□□□ 1.48
NR1H3-228ENST00000525441 FYB1O15117 783 aa24.27■■□□□ 1.48
NR1H3-228ENST00000525441 CDCA7Q9BWT1 371 aaPredicted RBP24.27■■□□□ 1.48
NR1H3-228ENST00000525441 MYOM1P52179 1685 aa24.27■■□□□ 1.48
NR1H3-228ENST00000525441 FAM182BQ5T319 152 aa24.26■■□□□ 1.47
NR1H3-228ENST00000525441 FAM196AQ6ZSG2 479 aa24.26■■□□□ 1.47
NR1H3-228ENST00000525441 GGNBP2Q9H3C7 697 aa24.26■■□□□ 1.47
NR1H3-228ENST00000525441 LTN1O94822 1766 aa24.26■■□□□ 1.47
NR1H3-228ENST00000525441 RGPD5Q99666 1765 aa24.25■■□□□ 1.47
NR1H3-228ENST00000525441 ERBB3P21860 1342 aa24.25■■□□□ 1.47
NR1H3-228ENST00000525441 CCDC7Q96M83 1385 aa24.25■■□□□ 1.47
NR1H3-228ENST00000525441 IP6K1Q92551 441 aa24.24■■□□□ 1.47
NR1H3-228ENST00000525441 NSD3Q9BZ95 1437 aa24.24■■□□□ 1.47
NR1H3-228ENST00000525441 CARD14Q9BXL6 1004 aa24.23■■□□□ 1.47
NR1H3-228ENST00000525441 PARP4Q9UKK3 1724 aaKnown RBP24.22■■□□□ 1.47
NR1H3-228ENST00000525441 C11orf95C9JLR9 678 aaPredicted RBP24.22■■□□□ 1.47
NR1H3-228ENST00000525441 DDB1Q16531 1140 aa24.22■■□□□ 1.47
NR1H3-228ENST00000525441 ANKRD24Q8TF21 1146 aa24.22■■□□□ 1.47
NR1H3-228ENST00000525441 NLRP2Q9NX02 1062 aa24.22■■□□□ 1.47
NR1H3-228ENST00000525441 MAP3K19Q56UN5 1328 aa24.21■■□□□ 1.47
NR1H3-228ENST00000525441 BAG6P46379 1132 aa24.21■■□□□ 1.47
NR1H3-228ENST00000525441 AMPHP49418 695 aa24.21■■□□□ 1.47
NR1H3-228ENST00000525441 KIF20BQ96Q89 1820 aa24.19■■□□□ 1.46
NR1H3-228ENST00000525441 CGNL1Q0VF96 1302 aa24.19■■□□□ 1.46
NR1H3-228ENST00000525441 DEFB132Q7Z7B7 95 aa24.19■■□□□ 1.46
NR1H3-228ENST00000525441 RTL1A6NKG5 1358 aa24.17■■□□□ 1.46
NR1H3-228ENST00000525441 HOXC9P31274 260 aa24.17■■□□□ 1.46
NR1H3-228ENST00000525441 RGPD1P0DJD0 1748 aa24.17■■□□□ 1.46
NR1H3-228ENST00000525441 FBLN1P23142 703 aa24.16■■□□□ 1.46
NR1H3-228ENST00000525441 DISP2A7MBM2 1401 aa24.16■■□□□ 1.46
NR1H3-228ENST00000525441 WNK3Q9BYP7 1800 aa24.15■■□□□ 1.46
NR1H3-228ENST00000525441 LRRC37A3O60309 1634 aa24.15■■□□□ 1.46
NR1H3-228ENST00000525441 TRIM37O94972 964 aa24.15■■□□□ 1.46
NR1H3-228ENST00000525441 RRS1Q15050 365 aaKnown RBP24.15■■□□□ 1.46
NR1H3-228ENST00000525441 LTV1Q96GA3 475 aaPredicted RBP24.15■■□□□ 1.46
NR1H3-228ENST00000525441 OVOS2A0A0G2JMS6 1433 aa24.15■■□□□ 1.46
NR1H3-228ENST00000525441 EXOC5O00471 708 aa24.14■■□□□ 1.45
NR1H3-228ENST00000525441 PANK3Q9H999 370 aa24.13■■□□□ 1.45
NR1H3-228ENST00000525441 IL2RBP14784 551 aa24.12■■□□□ 1.45
NR1H3-228ENST00000525441 KIF24Q5T7B8 1368 aa24.12■■□□□ 1.45
NR1H3-228ENST00000525441 FAM208AQ9UK61 1670 aaKnown RBP24.11■■□□□ 1.45
NR1H3-228ENST00000525441 SMG6Q86US8 1419 aaKnown RBP24.1■■□□□ 1.45
NR1H3-228ENST00000525441 FLT4P35916 1363 aa24.09■■□□□ 1.45
NR1H3-228ENST00000525441 APBA3O96018 575 aa24.09■■□□□ 1.45
NR1H3-228ENST00000525441 EN1Q05925 392 aaPredicted RBP24.09■■□□□ 1.45
NR1H3-228ENST00000525441 TNS2Q63HR2 1409 aa24.09■■□□□ 1.45
NR1H3-228ENST00000525441 TNS1Q9HBL0 1735 aaKnown RBP24.08■■□□□ 1.45
NR1H3-228ENST00000525441 MARCH10Q8NA82 808 aaPredicted RBP24.08■■□□□ 1.45
NR1H3-228ENST00000525441 KIF7Q2M1P5 1343 aa24.07■■□□□ 1.44
NR1H3-228ENST00000525441 INSRP06213 1382 aa24.06■■□□□ 1.44
NR1H3-228ENST00000525441 BCL9O00512 1426 aa24.06■■□□□ 1.44
NR1H3-228ENST00000525441 PEAK1Q9H792 1746 aa24.06■■□□□ 1.44
NR1H3-228ENST00000525441 NSD2O96028 1365 aa24.05■■□□□ 1.44
NR1H3-228ENST00000525441 PARD3Q8TEW0 1356 aa24.05■■□□□ 1.44
NR1H3-228ENST00000525441 HSP90AB2PQ58FF8 381 aa24.04■■□□□ 1.44
NR1H3-228ENST00000525441 KNSTRNQ9Y448 316 aa24.04■■□□□ 1.44
NR1H3-228ENST00000525441 EMILIN1Q9Y6C2 1016 aa24.04■■□□□ 1.44
NR1H3-228ENST00000525441 PPM1GO15355 546 aaPredicted RBP24.02■■□□□ 1.44
NR1H3-228ENST00000525441 EZH2Q15910 746 aaKnown RBP24.02■■□□□ 1.44
NR1H3-228ENST00000525441 CAMKK2Q96RR4 588 aa24.02■■□□□ 1.44
NR1H3-228ENST00000525441 BCL11BQ9C0K0 894 aaPredicted RBP24.02■■□□□ 1.44
NR1H3-228ENST00000525441 NBPF6Q5VWK0 638 aa24■■□□□ 1.43
NR1H3-228ENST00000525441 NBPF4Q96M43 638 aa24■■□□□ 1.43
NR1H3-228ENST00000525441 ANKRD26Q9UPS8 1709 aa24■■□□□ 1.43
NR1H3-228ENST00000525441 TNNT2P45379 298 aaPredicted RBP23.99■■□□□ 1.43
NR1H3-228ENST00000525441 POLKQ9UBT6 870 aa23.98■■□□□ 1.43
NR1H3-228ENST00000525441 WASHC2AQ641Q2 1341 aa23.98■■□□□ 1.43
NR1H3-228ENST00000525441 MORC1Q86VD1 984 aa23.97■■□□□ 1.43
NR1H3-228ENST00000525441 SBF2Q86WG5 1849 aa23.97■■□□□ 1.43
NR1H3-228ENST00000525441 RAPGEF4Q8WZA2 1011 aa23.97■■□□□ 1.43
NR1H3-228ENST00000525441 RGPD2P0DJD1 1756 aa23.96■■□□□ 1.43
NR1H3-228ENST00000525441 USHBP1Q8N6Y0 703 aa23.95■■□□□ 1.42
NR1H3-228ENST00000525441 DDX54Q8TDD1 881 aaKnown RBP23.95■■□□□ 1.42
NR1H3-228ENST00000525441 MAP2P11137 1827 aaKnown RBP23.95■■□□□ 1.42
NR1H3-228ENST00000525441 PLSCR1O15162 318 aa23.94■■□□□ 1.42
NR1H3-228ENST00000525441 ZCRB1Q8TBF4 217 aaKnown RBP23.94■■□□□ 1.42
NR1H3-228ENST00000525441 TATP17735 454 aaPredicted RBP23.93■■□□□ 1.42
NR1H3-228ENST00000525441 MEGF6O75095 1541 aa23.93■■□□□ 1.42
NR1H3-228ENST00000525441 AMER1Q5JTC6 1135 aaPredicted RBP23.91■■□□□ 1.42
NR1H3-228ENST00000525441 NBPF14Q5TI25 921 aa23.91■■□□□ 1.42
NR1H3-228ENST00000525441 PTF1AQ7RTS3 328 aa23.91■■□□□ 1.42
NR1H3-228ENST00000525441 ACSBG1Q96GR2 724 aa23.91■■□□□ 1.42
NR1H3-228ENST00000525441 RGPD3A6NKT7 1758 aaPredicted RBP23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms