RNA–Protein interactions for RNA: ENST00000525359.1

CLNS1A-203, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-203ENST00000525359 UPP2O95045 317 aa5.86□□□□□ -1.47
CLNS1A-203ENST00000525359 NR1H3Q13133 447 aa5.86□□□□□ -1.47
CLNS1A-203ENST00000525359 CCDC125Q86Z20 511 aa5.86□□□□□ -1.47
CLNS1A-203ENST00000525359 CCDC116Q8IYX3 515 aa5.86□□□□□ -1.47
CLNS1A-203ENST00000525359 SENP2Q9HC62 589 aa5.86□□□□□ -1.47
CLNS1A-203ENST00000525359 PCDHB9Q9Y5E1 797 aa5.86□□□□□ -1.47
CLNS1A-203ENST00000525359 ZIC2O95409 532 aaPredicted RBP5.85□□□□□ -1.47
CLNS1A-203ENST00000525359 GRM5P41594 1212 aa5.85□□□□□ -1.47
CLNS1A-203ENST00000525359 SCARF1Q14162 830 aa5.85□□□□□ -1.47
CLNS1A-203ENST00000525359 MCM6Q14566 821 aa5.85□□□□□ -1.47
CLNS1A-203ENST00000525359 RNF20Q5VTR2 975 aa5.85□□□□□ -1.47
CLNS1A-203ENST00000525359 ZNF787Q6DD87 383 aa5.85□□□□□ -1.47
CLNS1A-203ENST00000525359 KIFC2Q96AC6 838 aa5.85□□□□□ -1.47
CLNS1A-203ENST00000525359 FBXO45P0C2W1 286 aa5.84□□□□□ -1.47
CLNS1A-203ENST00000525359 EIF4G2P78344 907 aaKnown RBP eCLIP5.84□□□□□ -1.47
CLNS1A-203ENST00000525359 WASHC4Q2M389 1173 aa5.84□□□□□ -1.47
CLNS1A-203ENST00000525359 SEPT12Q8IYM1 358 aa5.84□□□□□ -1.47
CLNS1A-203ENST00000525359 ATP13A2Q9NQ11 1180 aa5.84□□□□□ -1.47
CLNS1A-203ENST00000525359 TBC1D2BQ9UPU7 963 aa5.84□□□□□ -1.47
CLNS1A-203ENST00000525359 C11orf95C9JLR9 678 aaPredicted RBP5.83□□□□□ -1.48
CLNS1A-203ENST00000525359 UBTFP17480 764 aaKnown RBP5.83□□□□□ -1.48
CLNS1A-203ENST00000525359 ABL2P42684 1182 aa5.83□□□□□ -1.48
CLNS1A-203ENST00000525359 ESF1Q9H501 851 aaKnown RBP5.83□□□□□ -1.48
CLNS1A-203ENST00000525359 LCE2BO14633 110 aa5.82□□□□□ -1.48
CLNS1A-203ENST00000525359 NR3C2P08235 984 aa5.82□□□□□ -1.48
CLNS1A-203ENST00000525359 TIMP2P16035 220 aa5.82□□□□□ -1.48
CLNS1A-203ENST00000525359 RAB15P59190 212 aa5.82□□□□□ -1.48
CLNS1A-203ENST00000525359 PPP1R26Q5T8A7 1209 aaPredicted RBP5.82□□□□□ -1.48
CLNS1A-203ENST00000525359 ITPKCQ96DU7 683 aa5.82□□□□□ -1.48
CLNS1A-203ENST00000525359 OCSTAMPQ9BR26 566 aa5.82□□□□□ -1.48
CLNS1A-203ENST00000525359 GDPD2Q9HCC8 539 aa5.82□□□□□ -1.48
CLNS1A-203ENST00000525359 INTS6LQ5JSJ4 861 aaKnown RBP5.81□□□□□ -1.48
CLNS1A-203ENST00000525359 TSEN34Q9BSV6 310 aaKnown RBP5.81□□□□□ -1.48
CLNS1A-203ENST00000525359 SOX11P35716 441 aa5.8□□□□□ -1.48
CLNS1A-203ENST00000525359 MRPL14Q6P1L8 145 aaKnown RBP5.8□□□□□ -1.48
CLNS1A-203ENST00000525359 ZFAND3Q9H8U3 227 aa5.8□□□□□ -1.48
CLNS1A-203ENST00000525359 GMPR2Q9P2T1 348 aaKnown RBP5.8□□□□□ -1.48
CLNS1A-203ENST00000525359 ESPNB1AK53 854 aa5.79□□□□□ -1.48
CLNS1A-203ENST00000525359 BMP2P12643 396 aa5.79□□□□□ -1.48
CLNS1A-203ENST00000525359 BMP1P13497 986 aa5.79□□□□□ -1.48
CLNS1A-203ENST00000525359 SEMA3FQ13275 785 aa5.79□□□□□ -1.48
CLNS1A-203ENST00000525359 MEIOBQ8N635 442 aa5.79□□□□□ -1.48
CLNS1A-203ENST00000525359 TRIM47Q96LD4 638 aa5.79□□□□□ -1.48
CLNS1A-203ENST00000525359 KLF16Q9BXK1 252 aaPredicted RBP5.79□□□□□ -1.48
CLNS1A-203ENST00000525359 DACH1Q9UI36 760 aa5.79□□□□□ -1.48
CLNS1A-203ENST00000525359 GIGYF1O75420 1035 aaPredicted RBP5.78□□□□□ -1.48
CLNS1A-203ENST00000525359 SLFNL1Q499Z3 407 aa5.78□□□□□ -1.48
CLNS1A-203ENST00000525359 COG6Q9Y2V7 657 aa5.78□□□□□ -1.48
CLNS1A-203ENST00000525359 ERVH48-1M5A8F1 160 aa5.77□□□□□ -1.49
CLNS1A-203ENST00000525359 GPR37L1O60883 481 aa5.77□□□□□ -1.49
CLNS1A-203ENST00000525359 C6orf118Q5T5N4 469 aa5.77□□□□□ -1.49
CLNS1A-203ENST00000525359 TRIM46Q7Z4K8 759 aa5.77□□□□□ -1.49
CLNS1A-203ENST00000525359 LINC00528Q8N1L1 170 aa5.77□□□□□ -1.49
CLNS1A-203ENST00000525359 ZFP42Q96MM3 310 aa5.77□□□□□ -1.49
CLNS1A-203ENST00000525359 PURBQ96QR8 312 aaKnown RBP5.77□□□□□ -1.49
CLNS1A-203ENST00000525359 MYCP01106 439 aaPredicted RBP5.76□□□□□ -1.49
CLNS1A-203ENST00000525359 VAC14Q08AM6 782 aa5.76□□□□□ -1.49
CLNS1A-203ENST00000525359 IRF5Q13568 498 aa5.76□□□□□ -1.49
CLNS1A-203ENST00000525359 ZNF784Q8NCA9 323 aaPredicted RBP5.76□□□□□ -1.49
CLNS1A-203ENST00000525359 MAN1A2O60476 641 aa5.75□□□□□ -1.49
CLNS1A-203ENST00000525359 Q6ZVU0 165 aa5.75□□□□□ -1.49
CLNS1A-203ENST00000525359 SIRT1Q96EB6 747 aa5.75□□□□□ -1.49
CLNS1A-203ENST00000525359 CEP126Q9P2H0 1117 aa5.75□□□□□ -1.49
CLNS1A-203ENST00000525359 PCDHB11Q9Y5F2 797 aa5.75□□□□□ -1.49
CLNS1A-203ENST00000525359 POTECB2RU33 542 aa5.74□□□□□ -1.49
CLNS1A-203ENST00000525359 ADH1AP07327 375 aa5.74□□□□□ -1.49
CLNS1A-203ENST00000525359 RELBQ01201 579 aa5.74□□□□□ -1.49
CLNS1A-203ENST00000525359 CBLBQ13191 982 aa5.74□□□□□ -1.49
CLNS1A-203ENST00000525359 CC2D2BQ6DHV5 1058 aa5.74□□□□□ -1.49
CLNS1A-203ENST00000525359 CYP2U1Q7Z449 544 aa5.74□□□□□ -1.49
CLNS1A-203ENST00000525359 RNF135Q8IUD6 432 aa5.74□□□□□ -1.49
CLNS1A-203ENST00000525359 CYLDQ9NQC7 956 aa5.74□□□□□ -1.49
CLNS1A-203ENST00000525359 TMPRSS4Q9NRS4 437 aa5.74□□□□□ -1.49
CLNS1A-203ENST00000525359 SNRPBP14678 240 aaKnown RBP5.73□□□□□ -1.49
CLNS1A-203ENST00000525359 DOLKQ9UPQ8 538 aa5.73□□□□□ -1.49
CLNS1A-203ENST00000525359 TTLL8A6PVC2 850 aa5.72□□□□□ -1.49
CLNS1A-203ENST00000525359 ATP5J2-PTCD1G3V325 749 aa5.72□□□□□ -1.49
CLNS1A-203ENST00000525359 SPINT1O43278 529 aa5.72□□□□□ -1.49
CLNS1A-203ENST00000525359 ERVK-9P63128 1117 aa5.72□□□□□ -1.49
CLNS1A-203ENST00000525359 USP4Q13107 963 aa5.72□□□□□ -1.49
CLNS1A-203ENST00000525359 MAP7D1Q3KQU3 841 aa5.72□□□□□ -1.49
CLNS1A-203ENST00000525359 POM121Q96HA1 1249 aa5.72□□□□□ -1.49
CLNS1A-203ENST00000525359 POLMQ9NP87 494 aaPredicted RBP5.72□□□□□ -1.49
CLNS1A-203ENST00000525359 LILRA1O75019 489 aa5.71□□□□□ -1.5
CLNS1A-203ENST00000525359 PTGIRP43119 386 aa5.71□□□□□ -1.5
CLNS1A-203ENST00000525359 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.71□□□□□ -1.55e-10■□□□□ 9.6
CLNS1A-203ENST00000525359 PROSER2Q86WR7 435 aaPredicted RBP5.71□□□□□ -1.5
CLNS1A-203ENST00000525359 SLC16A10Q8TF71 515 aa5.71□□□□□ -1.5
CLNS1A-203ENST00000525359 AGBL1Q96MI9 1066 aa5.71□□□□□ -1.5
CLNS1A-203ENST00000525359 NLRP3Q96P20 1036 aa5.71□□□□□ -1.5
CLNS1A-203ENST00000525359 SOS2Q07890 1332 aaPredicted RBP5.7□□□□□ -1.5
CLNS1A-203ENST00000525359 A6NJR5 290 aa5.69□□□□□ -1.5
CLNS1A-203ENST00000525359 MEN1O00255 615 aa5.69□□□□□ -1.5
CLNS1A-203ENST00000525359 LZTS3O60299 673 aaPredicted RBP5.69□□□□□ -1.5
CLNS1A-203ENST00000525359 GNRH1P01148 92 aa5.69□□□□□ -1.5
CLNS1A-203ENST00000525359 GTF2E1P29083 439 aaPredicted RBP5.69□□□□□ -1.5
CLNS1A-203ENST00000525359 ADD1P35611 737 aaKnown RBP5.69□□□□□ -1.5
CLNS1A-203ENST00000525359 NPAS3Q8IXF0 933 aa5.69□□□□□ -1.5
CLNS1A-203ENST00000525359 NFATC2IPQ8NCF5 419 aa5.69□□□□□ -1.5
CLNS1A-203ENST00000525359 ZNF775Q96BV0 537 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms