RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 C11orf95C9JLR9 678 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC4-206ENST00000525303 CPSF1Q10570 1443 aaKnown RBP13.77□□□□□ -0.21
TRAPPC4-206ENST00000525303 DDB1Q16531 1140 aa13.77□□□□□ -0.21
TRAPPC4-206ENST00000525303 TOM1L2Q6ZVM7 507 aa13.77□□□□□ -0.21
TRAPPC4-206ENST00000525303 EVC2Q86UK5 1308 aa13.76□□□□□ -0.21
TRAPPC4-206ENST00000525303 L3MBTL2Q969R5 705 aa13.76□□□□□ -0.21
TRAPPC4-206ENST00000525303 WDR17Q8IZU2 1322 aa13.75□□□□□ -0.21
TRAPPC4-206ENST00000525303 AXIN2Q9Y2T1 843 aa13.75□□□□□ -0.21
TRAPPC4-206ENST00000525303 PTF1AQ7RTS3 328 aa13.74□□□□□ -0.21
TRAPPC4-206ENST00000525303 POTEDQ86YR6 584 aa13.74□□□□□ -0.21
TRAPPC4-206ENST00000525303 SPON1Q9HCB6 807 aa13.74□□□□□ -0.21
TRAPPC4-206ENST00000525303 PPP1R1BQ9UD71 204 aaPredicted RBP13.74□□□□□ -0.21
TRAPPC4-206ENST00000525303 USP54Q70EL1 1684 aa13.74□□□□□ -0.21
TRAPPC4-206ENST00000525303 NFAT5O94916 1531 aa13.74□□□□□ -0.21
TRAPPC4-206ENST00000525303 TTC21BQ7Z4L5 1316 aa13.73□□□□□ -0.21
TRAPPC4-206ENST00000525303 PLSCR1O15162 318 aa13.73□□□□□ -0.21
TRAPPC4-206ENST00000525303 SOX12O15370 315 aa13.73□□□□□ -0.21
TRAPPC4-206ENST00000525303 KCNQ2O43526 872 aa13.73□□□□□ -0.21
TRAPPC4-206ENST00000525303 MYOM1P52179 1685 aa13.72□□□□□ -0.21
TRAPPC4-206ENST00000525303 ROCK2O75116 1388 aaKnown RBP13.72□□□□□ -0.21
TRAPPC4-206ENST00000525303 ARHGEF25Q86VW2 580 aa13.72□□□□□ -0.21
TRAPPC4-206ENST00000525303 MARCH10Q8NA82 808 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC4-206ENST00000525303 KCNH5Q8NCM2 988 aa13.72□□□□□ -0.21
TRAPPC4-206ENST00000525303 ZNF692Q9BU19 519 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC4-206ENST00000525303 BCL11BQ9C0K0 894 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC4-206ENST00000525303 NHSQ6T4R5 1651 aa13.72□□□□□ -0.21
TRAPPC4-206ENST00000525303 CSB-PGBD3P0DP91 1061 aa13.71□□□□□ -0.21
TRAPPC4-206ENST00000525303 SIN3AQ96ST3 1273 aa13.71□□□□□ -0.21
TRAPPC4-206ENST00000525303 CDCA7Q9BWT1 371 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC4-206ENST00000525303 ANO8Q9HCE9 1232 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC4-206ENST00000525303 BTAF1O14981 1849 aa13.71□□□□□ -0.22
TRAPPC4-206ENST00000525303 NINLQ9Y2I6 1382 aa13.71□□□□□ -0.22
TRAPPC4-206ENST00000525303 CHD4Q14839 1912 aa13.7□□□□□ -0.22
TRAPPC4-206ENST00000525303 ABCC6O95255 1503 aa13.7□□□□□ -0.22
TRAPPC4-206ENST00000525303 UTRNP46939 3433 aa13.7□□□□□ -0.22
TRAPPC4-206ENST00000525303 TTC21AQ8NDW8 1320 aa13.7□□□□□ -0.22
TRAPPC4-206ENST00000525303 YY1P25490 414 aa13.7□□□□□ -0.22
TRAPPC4-206ENST00000525303 CARD10Q9BWT7 1032 aa13.7□□□□□ -0.22
TRAPPC4-206ENST00000525303 BCL9O00512 1426 aa13.7□□□□□ -0.22
TRAPPC4-206ENST00000525303 KTN1Q86UP2 1357 aaKnown RBP13.7□□□□□ -0.22
TRAPPC4-206ENST00000525303 PROM2Q8N271 834 aa13.69□□□□□ -0.22
TRAPPC4-206ENST00000525303 NEUROD1Q13562 356 aa13.68□□□□□ -0.22
TRAPPC4-206ENST00000525303 PDGFDQ9GZP0 370 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-206ENST00000525303 TNS2Q63HR2 1409 aa13.67□□□□□ -0.22
TRAPPC4-206ENST00000525303 EXOC5O00471 708 aa13.67□□□□□ -0.22
TRAPPC4-206ENST00000525303 PIAS4Q8N2W9 510 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC4-206ENST00000525303 CCDC7Q96M83 1385 aa13.67□□□□□ -0.22
TRAPPC4-206ENST00000525303 DCAF8L1A6NGE4 600 aa13.66□□□□□ -0.22
TRAPPC4-206ENST00000525303 RGPD2P0DJD1 1756 aa13.66□□□□□ -0.22
TRAPPC4-206ENST00000525303 ZBTB7AO95365 584 aa13.65□□□□□ -0.22
TRAPPC4-206ENST00000525303 TXNRD1Q16881 649 aa13.65□□□□□ -0.22
TRAPPC4-206ENST00000525303 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.65□□□□□ -0.22
TRAPPC4-206ENST00000525303 CD163L1Q9NR16 1453 aa13.65□□□□□ -0.22
TRAPPC4-206ENST00000525303 FAM208AQ9UK61 1670 aaKnown RBP13.65□□□□□ -0.22
TRAPPC4-206ENST00000525303 SBNO2Q9Y2G9 1366 aa13.64□□□□□ -0.23
TRAPPC4-206ENST00000525303 STK32BQ9NY57 414 aa13.64□□□□□ -0.23
TRAPPC4-206ENST00000525303 PAPPAQ13219 1627 aa13.64□□□□□ -0.23
TRAPPC4-206ENST00000525303 USP31Q70CQ4 1352 aa13.63□□□□□ -0.23
TRAPPC4-206ENST00000525303 TUBGCP6Q96RT7 1819 aa13.63□□□□□ -0.23
TRAPPC4-206ENST00000525303 NME9Q86XW9 330 aa13.63□□□□□ -0.23
TRAPPC4-206ENST00000525303 ATF5Q9Y2D1 282 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-206ENST00000525303 QSER1Q2KHR3 1735 aa13.63□□□□□ -0.23
TRAPPC4-206ENST00000525303 ERBB3P21860 1342 aa13.63□□□□□ -0.23
TRAPPC4-206ENST00000525303 PTGER2P43116 358 aa13.62□□□□□ -0.23
TRAPPC4-206ENST00000525303 SLC15A2Q16348 729 aa13.62□□□□□ -0.23
TRAPPC4-206ENST00000525303 ACSBG1Q96GR2 724 aa13.62□□□□□ -0.23
TRAPPC4-206ENST00000525303 NLRP2Q9NX02 1062 aa13.62□□□□□ -0.23
TRAPPC4-206ENST00000525303 TMC1Q8TDI8 760 aa13.61□□□□□ -0.23
TRAPPC4-206ENST00000525303 IL2RBP14784 551 aa13.6□□□□□ -0.23
TRAPPC4-206ENST00000525303 DOT1LQ8TEK3 1739 aa13.6□□□□□ -0.23
TRAPPC4-206ENST00000525303 CARD11Q9BXL7 1154 aa13.6□□□□□ -0.23
TRAPPC4-206ENST00000525303 SHANK3Q9BYB0 1731 aa13.6□□□□□ -0.23
TRAPPC4-206ENST00000525303 EDC4Q6P2E9 1401 aaKnown RBP13.59□□□□□ -0.23
TRAPPC4-206ENST00000525303 HDGFL2Q7Z4V5 671 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC4-206ENST00000525303 ANKRD24Q8TF21 1146 aa13.59□□□□□ -0.23
TRAPPC4-206ENST00000525303 PCGF6Q9BYE7 350 aa13.59□□□□□ -0.23
TRAPPC4-206ENST00000525303 SLC12A5Q9H2X9 1139 aa13.59□□□□□ -0.23
TRAPPC4-206ENST00000525303 MTFR1LQ9H019 292 aa13.58□□□□□ -0.24
TRAPPC4-206ENST00000525303 LY75O60449 1722 aa13.58□□□□□ -0.24
TRAPPC4-206ENST00000525303 COL24A1Q17RW2 1714 aa13.58□□□□□ -0.24
TRAPPC4-206ENST00000525303 A0A1W2PP64 1363 aa13.58□□□□□ -0.24
TRAPPC4-206ENST00000525303 FHDC1Q9C0D6 1143 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC4-206ENST00000525303 SGIP1Q9BQI5 828 aa13.56□□□□□ -0.24
TRAPPC4-206ENST00000525303 SYT17Q9BSW7 474 aa13.56□□□□□ -0.24
TRAPPC4-206ENST00000525303 TERF2IPQ9NYB0 399 aa13.56□□□□□ -0.24
TRAPPC4-206ENST00000525303 GOLGB1Q14789 3259 aaKnown RBP13.56□□□□□ -0.24
TRAPPC4-206ENST00000525303 ADRA2BP18089 450 aa13.55□□□□□ -0.24
TRAPPC4-206ENST00000525303 ZNF827Q17R98 1081 aa13.54□□□□□ -0.24
TRAPPC4-206ENST00000525303 KIF20BQ96Q89 1820 aa13.53□□□□□ -0.24
TRAPPC4-206ENST00000525303 IP6K1Q92551 441 aa13.53□□□□□ -0.24
TRAPPC4-206ENST00000525303 LTV1Q96GA3 475 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC4-206ENST00000525303 LRRC4BQ9NT99 713 aa13.53□□□□□ -0.24
TRAPPC4-206ENST00000525303 TONSLQ96HA7 1378 aa13.53□□□□□ -0.24
TRAPPC4-206ENST00000525303 DDX54Q8TDD1 881 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-206ENST00000525303 ARXQ96QS3 562 aa13.52□□□□□ -0.25
TRAPPC4-206ENST00000525303 TAF1LQ8IZX4 1826 aa13.51□□□□□ -0.25
TRAPPC4-206ENST00000525303 ZNF784Q8NCA9 323 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC4-206ENST00000525303 PUS7Q96PZ0 661 aaKnown RBP13.51□□□□□ -0.25
TRAPPC4-206ENST00000525303 MAP3K5Q99683 1374 aa13.5□□□□□ -0.25
TRAPPC4-206ENST00000525303 AKT1S1Q96B36 256 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms