RNA–Protein interactions for RNA: ENST00000525248.1

CKAP5-203, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 3

Gene CKAP5, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-203ENST00000525248 TMEM106CQ9BVX2 250 aa13.27□□□□□ -0.29
CKAP5-203ENST00000525248 CDK19Q9BWU1 502 aa13.27□□□□□ -0.29
CKAP5-203ENST00000525248 QRICH2Q9H0J4 1663 aa13.27□□□□□ -0.29
CKAP5-203ENST00000525248 A0A0G2JS52 829 aa13.26□□□□□ -0.29
CKAP5-203ENST00000525248 FAM83GA6ND36 823 aa13.26□□□□□ -0.29
CKAP5-203ENST00000525248 TTLL13PA6NNM8 815 aa13.26□□□□□ -0.29
CKAP5-203ENST00000525248 MYT1Q01538 1121 aa13.26□□□□□ -0.29
CKAP5-203ENST00000525248 COL14A1Q05707 1796 aaKnown RBP13.26□□□□□ -0.29
CKAP5-203ENST00000525248 VPS72Q15906 364 aa13.26□□□□□ -0.29
CKAP5-203ENST00000525248 PHRF1Q9P1Y6 1649 aaKnown RBP13.26□□□□□ -0.29
CKAP5-203ENST00000525248 PELP1Q8IZL8 1130 aaKnown RBP13.25□□□□□ -0.29
CKAP5-203ENST00000525248 RNF25Q96BH1 459 aaPredicted RBP13.25□□□□□ -0.29
CKAP5-203ENST00000525248 CENPJQ9HC77 1338 aaPredicted RBP13.24□□□□□ -0.29
CKAP5-203ENST00000525248 NUTM2GQ5VZR2 741 aa13.24□□□□□ -0.29
CKAP5-203ENST00000525248 SEPT12Q8IYM1 358 aa13.24□□□□□ -0.29
CKAP5-203ENST00000525248 L3MBTL2Q969R5 705 aa13.24□□□□□ -0.29
CKAP5-203ENST00000525248 SIN3AQ96ST3 1273 aa13.24□□□□□ -0.29
CKAP5-203ENST00000525248 PRDM11Q9NQV5 511 aa13.24□□□□□ -0.29
CKAP5-203ENST00000525248 BTG4Q9NY30 223 aa13.24□□□□□ -0.29
CKAP5-203ENST00000525248 BRWD3Q6RI45 1802 aa13.24□□□□□ -0.29
CKAP5-203ENST00000525248 PPIP5K1Q6PFW1 1433 aa13.23□□□□□ -0.29
CKAP5-203ENST00000525248 POLR3AO14802 1390 aaPredicted RBP13.23□□□□□ -0.29
CKAP5-203ENST00000525248 ACEP12821 1306 aa13.23□□□□□ -0.29
CKAP5-203ENST00000525248 SRPK2P78362 688 aaKnown RBP13.23□□□□□ -0.29
CKAP5-203ENST00000525248 TRPM1Q7Z4N2 1603 aa13.23□□□□□ -0.29
CKAP5-203ENST00000525248 NRKQ7Z2Y5 1582 aa13.23□□□□□ -0.29
CKAP5-203ENST00000525248 KIAA0232Q92628 1395 aa13.22□□□□□ -0.29
CKAP5-203ENST00000525248 RIOK3O14730 519 aaKnown RBP13.22□□□□□ -0.29
CKAP5-203ENST00000525248 PSEN1P49768 467 aa13.22□□□□□ -0.29
CKAP5-203ENST00000525248 NEUROD1Q13562 356 aa13.22□□□□□ -0.29
CKAP5-203ENST00000525248 BLMP54132 1417 aaPredicted RBP13.22□□□□□ -0.29
CKAP5-203ENST00000525248 PDAP1Q13442 181 aaKnown RBP13.21□□□□□ -0.29
CKAP5-203ENST00000525248 FAM98CQ17RN3 349 aaKnown RBP13.21□□□□□ -0.29
CKAP5-203ENST00000525248 CABP2Q9NPB3 220 aa13.21□□□□□ -0.29
CKAP5-203ENST00000525248 ROCK2O75116 1388 aaKnown RBP13.2□□□□□ -0.3
CKAP5-203ENST00000525248 CHRNA2Q15822 529 aa13.2□□□□□ -0.3
CKAP5-203ENST00000525248 RGL2O15211 777 aa13.19□□□□□ -0.3
CKAP5-203ENST00000525248 NBPF8Q3BBV2 869 aa13.19□□□□□ -0.3
CKAP5-203ENST00000525248 TRIM35Q9UPQ4 493 aa13.19□□□□□ -0.3
CKAP5-203ENST00000525248 PLEKHG3A1L390 1219 aa13.18□□□□□ -0.3
CKAP5-203ENST00000525248 ZC3H6P61129 1189 aaKnown RBP13.18□□□□□ -0.3
CKAP5-203ENST00000525248 KRT27Q7Z3Y8 459 aa13.18□□□□□ -0.3
CKAP5-203ENST00000525248 THSD7AQ9UPZ6 1657 aa13.18□□□□□ -0.3
CKAP5-203ENST00000525248 SPATA31A5Q5VU36 1347 aa13.17□□□□□ -0.3
CKAP5-203ENST00000525248 SPATA31A7Q8IWB4 1347 aa13.17□□□□□ -0.3
CKAP5-203ENST00000525248 DEFB132Q7Z7B7 95 aa13.17□□□□□ -0.3
CKAP5-203ENST00000525248 ABTB2Q8N961 1025 aa13.17□□□□□ -0.3
CKAP5-203ENST00000525248 STRN4Q9NRL3 753 aa13.17□□□□□ -0.3
CKAP5-203ENST00000525248 USP6P35125 1406 aa13.16□□□□□ -0.3
CKAP5-203ENST00000525248 CCDC125Q86Z20 511 aa13.16□□□□□ -0.3
CKAP5-203ENST00000525248 USP19O94966 1318 aa13.15□□□□□ -0.3
CKAP5-203ENST00000525248 ONECUT3O60422 494 aaPredicted RBP13.15□□□□□ -0.3
CKAP5-203ENST00000525248 SF3B2Q13435 895 aaKnown RBP13.15□□□□□ -0.3
CKAP5-203ENST00000525248 FAM182BQ5T319 152 aa13.15□□□□□ -0.3
CKAP5-203ENST00000525248 LMO7Q8WWI1 1683 aa13.15□□□□□ -0.31
CKAP5-203ENST00000525248 EVC2Q86UK5 1308 aa13.14□□□□□ -0.31
CKAP5-203ENST00000525248 SSH2Q76I76 1423 aa13.14□□□□□ -0.31
CKAP5-203ENST00000525248 SLC39A7Q92504 469 aa13.14□□□□□ -0.31
CKAP5-203ENST00000525248 CABP1Q9NZU7 370 aa13.14□□□□□ -0.31
CKAP5-203ENST00000525248 USP35Q9P2H5 1018 aa13.14□□□□□ -0.31
CKAP5-203ENST00000525248 SPATA31A1Q5TZJ5 1347 aa13.13□□□□□ -0.31
CKAP5-203ENST00000525248 PIK3C2AO00443 1686 aa13.13□□□□□ -0.31
CKAP5-203ENST00000525248 CAMTA1Q9Y6Y1 1673 aa13.13□□□□□ -0.31
CKAP5-203ENST00000525248 ZBTB7CA1YPR0 619 aa13.13□□□□□ -0.31
CKAP5-203ENST00000525248 METRNQ9UJH8 293 aa13.13□□□□□ -0.31
CKAP5-203ENST00000525248 CPDO75976 1380 aa13.12□□□□□ -0.31
CKAP5-203ENST00000525248 SLIT3O75094 1523 aa13.12□□□□□ -0.31
CKAP5-203ENST00000525248 TONSLQ96HA7 1378 aa13.11□□□□□ -0.31
CKAP5-203ENST00000525248 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.11□□□□□ -0.31
CKAP5-203ENST00000525248 GOLGA2Q08379 1002 aa13.11□□□□□ -0.31
CKAP5-203ENST00000525248 NLRP13Q86W25 1043 aa13.11□□□□□ -0.31
CKAP5-203ENST00000525248 ZFP91Q96JP5 570 aaPredicted RBP13.11□□□□□ -0.31
CKAP5-203ENST00000525248 COL5A2P05997 1499 aaPredicted RBP13.1□□□□□ -0.31
CKAP5-203ENST00000525248 GCP02774 474 aa13.1□□□□□ -0.31
CKAP5-203ENST00000525248 C7P10643 843 aa13.1□□□□□ -0.31
CKAP5-203ENST00000525248 EVA1CP58658 441 aa13.1□□□□□ -0.31
CKAP5-203ENST00000525248 LARP1Q6PKG0 1096 aaKnown RBP13.1□□□□□ -0.31
CKAP5-203ENST00000525248 RGPD1P0DJD0 1748 aa13.1□□□□□ -0.31
CKAP5-203ENST00000525248 BRD4O60885 1362 aaPredicted RBP13.09□□□□□ -0.31
CKAP5-203ENST00000525248 NLRP6P59044 892 aa13.09□□□□□ -0.31
CKAP5-203ENST00000525248 TNS1Q9HBL0 1735 aaKnown RBP13.09□□□□□ -0.31
CKAP5-203ENST00000525248 AKAP12Q02952 1782 aa13.08□□□□□ -0.32
CKAP5-203ENST00000525248 SOX12O15370 315 aa13.08□□□□□ -0.32
CKAP5-203ENST00000525248 BAG6P46379 1132 aa13.08□□□□□ -0.32
CKAP5-203ENST00000525248 CARD11Q9BXL7 1154 aa13.08□□□□□ -0.32
CKAP5-203ENST00000525248 TAOK2Q9UL54 1235 aa13.07□□□□□ -0.32
CKAP5-203ENST00000525248 SBNO2Q9Y2G9 1366 aa13.07□□□□□ -0.32
CKAP5-203ENST00000525248 CPSF1Q10570 1443 aaKnown RBP13.06□□□□□ -0.32
CKAP5-203ENST00000525248 AMER1Q5JTC6 1135 aaPredicted RBP13.06□□□□□ -0.32
CKAP5-203ENST00000525248 TCP11L2Q8N4U5 519 aa13.06□□□□□ -0.32
CKAP5-203ENST00000525248 TTC21BQ7Z4L5 1316 aa13.06□□□□□ -0.32
CKAP5-203ENST00000525248 KTN1Q86UP2 1357 aaKnown RBP13.06□□□□□ -0.32
CKAP5-203ENST00000525248 CRB1P82279 1406 aa13.05□□□□□ -0.32
CKAP5-203ENST00000525248 MON2Q7Z3U7 1717 aa13.05□□□□□ -0.32
CKAP5-203ENST00000525248 PSDA5PKW4 1024 aaPredicted RBP13.05□□□□□ -0.32
CKAP5-203ENST00000525248 SEC24BO95487 1268 aa13.05□□□□□ -0.32
CKAP5-203ENST00000525248 EN1Q05925 392 aaPredicted RBP13.05□□□□□ -0.32
CKAP5-203ENST00000525248 BARGINQ6ZT62 677 aa13.05□□□□□ -0.32
CKAP5-203ENST00000525248 RTN4Q9NQC3 1192 aaKnown RBP13.05□□□□□ -0.32
CKAP5-203ENST00000525248 AATKQ6ZMQ8 1374 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms