RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 CRB1P82279 1406 aa26.03■■□□□ 1.76
CAPN1-203ENST00000525013 EDC4Q6P2E9 1401 aaKnown RBP26.03■■□□□ 1.76
CAPN1-203ENST00000525013 TMF1P82094 1093 aa26.02■■□□□ 1.76
CAPN1-203ENST00000525013 PDE3BQ13370 1112 aa26.02■■□□□ 1.76
CAPN1-203ENST00000525013 TOM1L2Q6ZVM7 507 aa26.02■■□□□ 1.76
CAPN1-203ENST00000525013 USP31Q70CQ4 1352 aa26.02■■□□□ 1.76
CAPN1-203ENST00000525013 NFAT5O94916 1531 aa26.01■■□□□ 1.75
CAPN1-203ENST00000525013 NINLQ9Y2I6 1382 aa26.01■■□□□ 1.75
CAPN1-203ENST00000525013 CSB-PGBD3P0DP91 1061 aa25.99■■□□□ 1.75
CAPN1-203ENST00000525013 BAG6P46379 1132 aa25.99■■□□□ 1.75
CAPN1-203ENST00000525013 RGPD1P0DJD0 1748 aa25.98■■□□□ 1.75
CAPN1-203ENST00000525013 FAM196AQ6ZSG2 479 aa25.98■■□□□ 1.75
CAPN1-203ENST00000525013 USP54Q70EL1 1684 aa25.97■■□□□ 1.75
CAPN1-203ENST00000525013 WDR17Q8IZU2 1322 aa25.97■■□□□ 1.75
CAPN1-203ENST00000525013 LTN1O94822 1766 aa25.95■■□□□ 1.74
CAPN1-203ENST00000525013 TRIM37O94972 964 aa25.94■■□□□ 1.74
CAPN1-203ENST00000525013 PARP4Q9UKK3 1724 aaKnown RBP25.94■■□□□ 1.74
CAPN1-203ENST00000525013 CDCA8Q53HL2 280 aa25.93■■□□□ 1.74
CAPN1-203ENST00000525013 EN1Q05925 392 aaPredicted RBP25.91■■□□□ 1.74
CAPN1-203ENST00000525013 ANKRD36BQ8N2N9 1353 aa25.91■■□□□ 1.74
CAPN1-203ENST00000525013 ABCC6O95255 1503 aa25.9■■□□□ 1.74
CAPN1-203ENST00000525013 CARD10Q9BWT7 1032 aa25.9■■□□□ 1.74
CAPN1-203ENST00000525013 TNS1Q9HBL0 1735 aaKnown RBP25.9■■□□□ 1.74
CAPN1-203ENST00000525013 OVOS2A0A0J9YW53 1432 aa25.89■■□□□ 1.74
CAPN1-203ENST00000525013 OVOS2Q6IE36 1432 aa25.89■■□□□ 1.74
CAPN1-203ENST00000525013 DDB1Q16531 1140 aa25.89■■□□□ 1.74
CAPN1-203ENST00000525013 COG3Q96JB2 828 aa25.89■■□□□ 1.74
CAPN1-203ENST00000525013 WNK3Q9BYP7 1800 aa25.88■■□□□ 1.73
CAPN1-203ENST00000525013 CDCA7Q9BWT1 371 aaPredicted RBP25.87■■□□□ 1.73
CAPN1-203ENST00000525013 NLRP2Q9NX02 1062 aa25.86■■□□□ 1.73
CAPN1-203ENST00000525013 LRRC37A3O60309 1634 aa25.85■■□□□ 1.73
CAPN1-203ENST00000525013 APBA3O96018 575 aa25.85■■□□□ 1.73
CAPN1-203ENST00000525013 ERBB3P21860 1342 aa25.84■■□□□ 1.73
CAPN1-203ENST00000525013 CCDC7Q96M83 1385 aa25.83■■□□□ 1.73
CAPN1-203ENST00000525013 ANKRD24Q8TF21 1146 aa25.83■■□□□ 1.73
CAPN1-203ENST00000525013 DISP2A7MBM2 1401 aa25.82■■□□□ 1.72
CAPN1-203ENST00000525013 C11orf95C9JLR9 678 aaPredicted RBP25.82■■□□□ 1.72
CAPN1-203ENST00000525013 EZH2Q15910 746 aaKnown RBP25.82■■□□□ 1.72
CAPN1-203ENST00000525013 OVOS2A0A0G2JMS6 1433 aa25.81■■□□□ 1.72
CAPN1-203ENST00000525013 SRCAPQ6ZRS2 3230 aa25.81■■□□□ 1.72
CAPN1-203ENST00000525013 FYB1O15117 783 aa25.8■■□□□ 1.72
CAPN1-203ENST00000525013 FBLN1P23142 703 aa25.8■■□□□ 1.72
CAPN1-203ENST00000525013 IP6K1Q92551 441 aa25.8■■□□□ 1.72
CAPN1-203ENST00000525013 POLR3GLQ9BT43 218 aa25.8■■□□□ 1.72
CAPN1-203ENST00000525013 GGNBP2Q9H3C7 697 aa25.8■■□□□ 1.72
CAPN1-203ENST00000525013 EXOC5O00471 708 aa25.79■■□□□ 1.72
CAPN1-203ENST00000525013 AMPHP49418 695 aa25.79■■□□□ 1.72
CAPN1-203ENST00000525013 LTV1Q96GA3 475 aaPredicted RBP25.79■■□□□ 1.72
CAPN1-203ENST00000525013 CAMKK2Q96RR4 588 aa25.79■■□□□ 1.72
CAPN1-203ENST00000525013 MYOM1P52179 1685 aa25.78■■□□□ 1.72
CAPN1-203ENST00000525013 PEAK1Q9H792 1746 aa25.78■■□□□ 1.72
CAPN1-203ENST00000525013 EIF4G2P78344 907 aaKnown RBP eCLIP25.78■■□□□ 1.72
CAPN1-203ENST00000525013 SBF2Q86WG5 1849 aa25.78■■□□□ 1.72
CAPN1-203ENST00000525013 PSDA5PKW4 1024 aaPredicted RBP25.77■■□□□ 1.72
CAPN1-203ENST00000525013 MARCH10Q8NA82 808 aaPredicted RBP25.77■■□□□ 1.72
CAPN1-203ENST00000525013 MAP3K19Q56UN5 1328 aa25.77■■□□□ 1.72
CAPN1-203ENST00000525013 KIF20BQ96Q89 1820 aa25.77■■□□□ 1.72
CAPN1-203ENST00000525013 HSPA5P11021 654 aaKnown RBP25.75■■□□□ 1.71
CAPN1-203ENST00000525013 KAT6BQ8WYB5 2073 aa25.75■■□□□ 1.71
CAPN1-203ENST00000525013 PARD3Q8TEW0 1356 aa25.74■■□□□ 1.71
CAPN1-203ENST00000525013 IL2RBP14784 551 aa25.74■■□□□ 1.71
CAPN1-203ENST00000525013 CARD14Q9BXL6 1004 aa25.74■■□□□ 1.71
CAPN1-203ENST00000525013 HOXC9P31274 260 aa25.73■■□□□ 1.71
CAPN1-203ENST00000525013 RRS1Q15050 365 aaKnown RBP25.73■■□□□ 1.71
CAPN1-203ENST00000525013 NSD3Q9BZ95 1437 aa25.71■■□□□ 1.71
CAPN1-203ENST00000525013 R3HDM1Q15032 1099 aaKnown RBP25.71■■□□□ 1.71
CAPN1-203ENST00000525013 TNS2Q63HR2 1409 aa25.71■■□□□ 1.71
CAPN1-203ENST00000525013 FAM208AQ9UK61 1670 aaKnown RBP25.71■■□□□ 1.71
CAPN1-203ENST00000525013 BCL11BQ9C0K0 894 aaPredicted RBP25.7■■□□□ 1.7
CAPN1-203ENST00000525013 PTF1AQ7RTS3 328 aa25.68■■□□□ 1.7
CAPN1-203ENST00000525013 RGPD2P0DJD1 1756 aa25.68■■□□□ 1.7
CAPN1-203ENST00000525013 RREB1Q92766 1687 aa25.68■■□□□ 1.7
CAPN1-203ENST00000525013 RTL1A6NKG5 1358 aa25.67■■□□□ 1.7
CAPN1-203ENST00000525013 BCL9O00512 1426 aa25.66■■□□□ 1.7
CAPN1-203ENST00000525013 NUP188Q5SRE5 1749 aa25.65■■□□□ 1.7
CAPN1-203ENST00000525013 CGNL1Q0VF96 1302 aa25.64■■□□□ 1.7
CAPN1-203ENST00000525013 NBPF14Q5TI25 921 aa25.64■■□□□ 1.7
CAPN1-203ENST00000525013 PLSCR1O15162 318 aa25.63■■□□□ 1.69
CAPN1-203ENST00000525013 ACSBG1Q96GR2 724 aa25.62■■□□□ 1.69
CAPN1-203ENST00000525013 HSP90AB2PQ58FF8 381 aa25.61■■□□□ 1.69
CAPN1-203ENST00000525013 DDX54Q8TDD1 881 aaKnown RBP25.61■■□□□ 1.69
CAPN1-203ENST00000525013 RGPD3A6NKT7 1758 aaPredicted RBP25.61■■□□□ 1.69
CAPN1-203ENST00000525013 RGPD4Q7Z3J3 1758 aa25.61■■□□□ 1.69
CAPN1-203ENST00000525013 SMG6Q86US8 1419 aaKnown RBP25.61■■□□□ 1.69
CAPN1-203ENST00000525013 KCNQ2O43526 872 aa25.6■■□□□ 1.69
CAPN1-203ENST00000525013 FLT4P35916 1363 aa25.59■■□□□ 1.69
CAPN1-203ENST00000525013 PPM1GO15355 546 aaPredicted RBP25.59■■□□□ 1.69
CAPN1-203ENST00000525013 NBPF6Q5VWK0 638 aa25.58■■□□□ 1.69
CAPN1-203ENST00000525013 NBPF4Q96M43 638 aa25.58■■□□□ 1.69
CAPN1-203ENST00000525013 PANK3Q9H999 370 aa25.58■■□□□ 1.69
CAPN1-203ENST00000525013 EMILIN1Q9Y6C2 1016 aa25.58■■□□□ 1.69
CAPN1-203ENST00000525013 MAP2P11137 1827 aaKnown RBP25.58■■□□□ 1.68
CAPN1-203ENST00000525013 INSRP06213 1382 aa25.57■■□□□ 1.68
CAPN1-203ENST00000525013 USHBP1Q8N6Y0 703 aa25.57■■□□□ 1.68
CAPN1-203ENST00000525013 NHSQ6T4R5 1651 aa25.57■■□□□ 1.68
CAPN1-203ENST00000525013 KIF24Q5T7B8 1368 aa25.56■■□□□ 1.68
CAPN1-203ENST00000525013 LRP5O75197 1615 aa25.56■■□□□ 1.68
CAPN1-203ENST00000525013 ZCRB1Q8TBF4 217 aaKnown RBP25.54■■□□□ 1.68
CAPN1-203ENST00000525013 MEGF6O75095 1541 aa25.53■■□□□ 1.68
CAPN1-203ENST00000525013 TNNT2P45379 298 aaPredicted RBP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms