RNA–Protein interactions for RNA: ENST00000524084.5

CCDC25-211, Transcript of coiled-coil domain containing 25, humanhuman

TSL 3

Gene CCDC25, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-211ENST00000524084 NUP188Q5SRE5 1749 aa18.63■□□□□ 0.57
CCDC25-211ENST00000524084 AXIN2Q9Y2T1 843 aa18.62■□□□□ 0.57
CCDC25-211ENST00000524084 LRRC37A3O60309 1634 aa18.61■□□□□ 0.57
CCDC25-211ENST00000524084 KTN1Q86UP2 1357 aaKnown RBP18.61■□□□□ 0.57
CCDC25-211ENST00000524084 SBNO2Q9Y2G9 1366 aa18.61■□□□□ 0.57
CCDC25-211ENST00000524084 PLSCR1O15162 318 aa18.61■□□□□ 0.57
CCDC25-211ENST00000524084 COL18A1P39060 1754 aa18.6■□□□□ 0.57
CCDC25-211ENST00000524084 PEAK1Q9H792 1746 aa18.6■□□□□ 0.57
CCDC25-211ENST00000524084 BCL9O00512 1426 aa18.6■□□□□ 0.57
CCDC25-211ENST00000524084 CARD10Q9BWT7 1032 aa18.6■□□□□ 0.57
CCDC25-211ENST00000524084 BCL11BQ9C0K0 894 aaPredicted RBP18.6■□□□□ 0.57
CCDC25-211ENST00000524084 ABCC6O95255 1503 aa18.59■□□□□ 0.57
CCDC25-211ENST00000524084 CSB-PGBD3P0DP91 1061 aa18.59■□□□□ 0.57
CCDC25-211ENST00000524084 RGPD3A6NKT7 1758 aaPredicted RBP18.59■□□□□ 0.57
CCDC25-211ENST00000524084 RGPD4Q7Z3J3 1758 aa18.59■□□□□ 0.57
CCDC25-211ENST00000524084 AKAP12Q02952 1782 aa18.58■□□□□ 0.57
CCDC25-211ENST00000524084 SPON1Q9HCB6 807 aa18.58■□□□□ 0.56
CCDC25-211ENST00000524084 SOX12O15370 315 aa18.57■□□□□ 0.56
CCDC25-211ENST00000524084 CCDC7Q96M83 1385 aa18.56■□□□□ 0.56
CCDC25-211ENST00000524084 NFAT5O94916 1531 aa18.56■□□□□ 0.56
CCDC25-211ENST00000524084 MARCH10Q8NA82 808 aaPredicted RBP18.56■□□□□ 0.56
CCDC25-211ENST00000524084 PPP1R1BQ9UD71 204 aaPredicted RBP18.56■□□□□ 0.56
CCDC25-211ENST00000524084 KCNQ2O43526 872 aa18.55■□□□□ 0.56
CCDC25-211ENST00000524084 USP31Q70CQ4 1352 aa18.55■□□□□ 0.56
CCDC25-211ENST00000524084 WNK3Q9BYP7 1800 aa18.54■□□□□ 0.56
CCDC25-211ENST00000524084 EXOC5O00471 708 aa18.54■□□□□ 0.56
CCDC25-211ENST00000524084 CARD11Q9BXL7 1154 aa18.54■□□□□ 0.56
CCDC25-211ENST00000524084 SBF2Q86WG5 1849 aa18.53■□□□□ 0.56
CCDC25-211ENST00000524084 MON2Q7Z3U7 1717 aa18.52■□□□□ 0.56
CCDC25-211ENST00000524084 HDGFL2Q7Z4V5 671 aaPredicted RBP18.52■□□□□ 0.56
CCDC25-211ENST00000524084 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.52■□□□□ 0.56
CCDC25-211ENST00000524084 DCAF8L1A6NGE4 600 aa18.51■□□□□ 0.55
CCDC25-211ENST00000524084 NINLQ9Y2I6 1382 aa18.51■□□□□ 0.55
CCDC25-211ENST00000524084 TNS2Q63HR2 1409 aa18.5■□□□□ 0.55
CCDC25-211ENST00000524084 TMC1Q8TDI8 760 aa18.5■□□□□ 0.55
CCDC25-211ENST00000524084 TERF2IPQ9NYB0 399 aa18.5■□□□□ 0.55
CCDC25-211ENST00000524084 ERBB3P21860 1342 aa18.49■□□□□ 0.55
CCDC25-211ENST00000524084 PTF1AQ7RTS3 328 aa18.49■□□□□ 0.55
CCDC25-211ENST00000524084 PUS7Q96PZ0 661 aaKnown RBP18.49■□□□□ 0.55
CCDC25-211ENST00000524084 USP54Q70EL1 1684 aa18.49■□□□□ 0.55
CCDC25-211ENST00000524084 RGPD5Q99666 1765 aa18.49■□□□□ 0.55
CCDC25-211ENST00000524084 EDC4Q6P2E9 1401 aaKnown RBP18.49■□□□□ 0.55
CCDC25-211ENST00000524084 TONSLQ96HA7 1378 aa18.48■□□□□ 0.55
CCDC25-211ENST00000524084 NME9Q86XW9 330 aa18.48■□□□□ 0.55
CCDC25-211ENST00000524084 ANO8Q9HCE9 1232 aaPredicted RBP18.48■□□□□ 0.55
CCDC25-211ENST00000524084 CD163L1Q9NR16 1453 aa18.47■□□□□ 0.55
CCDC25-211ENST00000524084 PROM2Q8N271 834 aa18.47■□□□□ 0.55
CCDC25-211ENST00000524084 NLRP2Q9NX02 1062 aa18.47■□□□□ 0.55
CCDC25-211ENST00000524084 SLC24A1O60721 1099 aa18.46■□□□□ 0.55
CCDC25-211ENST00000524084 TXNRD1Q16881 649 aa18.46■□□□□ 0.55
CCDC25-211ENST00000524084 SLC12A5Q9H2X9 1139 aa18.46■□□□□ 0.55
CCDC25-211ENST00000524084 STK32BQ9NY57 414 aa18.46■□□□□ 0.55
CCDC25-211ENST00000524084 IL2RBP14784 551 aa18.45■□□□□ 0.54
CCDC25-211ENST00000524084 CASZ1Q86V15 1759 aa18.43■□□□□ 0.54
CCDC25-211ENST00000524084 YY1P25490 414 aa18.43■□□□□ 0.54
CCDC25-211ENST00000524084 ANKRD24Q8TF21 1146 aa18.43■□□□□ 0.54
CCDC25-211ENST00000524084 A0A1W2PP64 1363 aa18.42■□□□□ 0.54
CCDC25-211ENST00000524084 SLC15A2Q16348 729 aa18.42■□□□□ 0.54
CCDC25-211ENST00000524084 NHSQ6T4R5 1651 aa18.41■□□□□ 0.54
CCDC25-211ENST00000524084 LTN1O94822 1766 aa18.41■□□□□ 0.54
CCDC25-211ENST00000524084 ZBTB7AO95365 584 aa18.4■□□□□ 0.54
CCDC25-211ENST00000524084 IP6K1Q92551 441 aa18.39■□□□□ 0.53
CCDC25-211ENST00000524084 ACSBG1Q96GR2 724 aa18.38■□□□□ 0.53
CCDC25-211ENST00000524084 PDGFDQ9GZP0 370 aaPredicted RBP18.38■□□□□ 0.53
CCDC25-211ENST00000524084 MTFR1LQ9H019 292 aa18.38■□□□□ 0.53
CCDC25-211ENST00000524084 PTGER2P43116 358 aa18.37■□□□□ 0.53
CCDC25-211ENST00000524084 COG3Q96JB2 828 aa18.37■□□□□ 0.53
CCDC25-211ENST00000524084 TESK2Q96S53 571 aa18.36■□□□□ 0.53
CCDC25-211ENST00000524084 ATF5Q9Y2D1 282 aaPredicted RBP18.36■□□□□ 0.53
CCDC25-211ENST00000524084 FAM208AQ9UK61 1670 aaKnown RBP18.35■□□□□ 0.53
CCDC25-211ENST00000524084 ST20-MTHFSA0A0A6YYL1 179 aa18.35■□□□□ 0.53
CCDC25-211ENST00000524084 MYOM1P52179 1685 aa18.32■□□□□ 0.52
CCDC25-211ENST00000524084 AMPHP49418 695 aa18.32■□□□□ 0.52
CCDC25-211ENST00000524084 SLC27A3Q5K4L6 730 aa18.32■□□□□ 0.52
CCDC25-211ENST00000524084 DDX54Q8TDD1 881 aaKnown RBP18.32■□□□□ 0.52
CCDC25-211ENST00000524084 LTV1Q96GA3 475 aaPredicted RBP18.32■□□□□ 0.52
CCDC25-211ENST00000524084 ANKRD36BQ8N2N9 1353 aa18.31■□□□□ 0.52
CCDC25-211ENST00000524084 PAPPAQ13219 1627 aa18.31■□□□□ 0.52
CCDC25-211ENST00000524084 MAP3K19Q56UN5 1328 aa18.31■□□□□ 0.52
CCDC25-211ENST00000524084 BTAF1O14981 1849 aa18.31■□□□□ 0.52
CCDC25-211ENST00000524084 HOXC9P31274 260 aa18.31■□□□□ 0.52
CCDC25-211ENST00000524084 RTL1A6NKG5 1358 aa18.3■□□□□ 0.52
CCDC25-211ENST00000524084 SGIP1Q9BQI5 828 aa18.3■□□□□ 0.52
CCDC25-211ENST00000524084 SYT17Q9BSW7 474 aa18.3■□□□□ 0.52
CCDC25-211ENST00000524084 FHDC1Q9C0D6 1143 aaPredicted RBP18.3■□□□□ 0.52
CCDC25-211ENST00000524084 TMF1P82094 1093 aa18.29■□□□□ 0.52
CCDC25-211ENST00000524084 ARXQ96QS3 562 aa18.29■□□□□ 0.52
CCDC25-211ENST00000524084 SLC16A10Q8TF71 515 aa18.28■□□□□ 0.52
CCDC25-211ENST00000524084 LRRC4BQ9NT99 713 aa18.28■□□□□ 0.52
CCDC25-211ENST00000524084 ZNF827Q17R98 1081 aa18.27■□□□□ 0.52
CCDC25-211ENST00000524084 CDCA8Q53HL2 280 aa18.27■□□□□ 0.52
CCDC25-211ENST00000524084 ZCRB1Q8TBF4 217 aaKnown RBP18.27■□□□□ 0.52
CCDC25-211ENST00000524084 MAP3K5Q99683 1374 aa18.27■□□□□ 0.51
CCDC25-211ENST00000524084 CGNL1Q0VF96 1302 aa18.26■□□□□ 0.51
CCDC25-211ENST00000524084 SMG6Q86US8 1419 aaKnown RBP18.26■□□□□ 0.51
CCDC25-211ENST00000524084 SYTL4Q96C24 671 aaPredicted RBP18.26■□□□□ 0.51
CCDC25-211ENST00000524084 PRIM1P49642 420 aaKnown RBP18.25■□□□□ 0.51
CCDC25-211ENST00000524084 AKT1S1Q96B36 256 aa18.25■□□□□ 0.51
CCDC25-211ENST00000524084 UTRNP46939 3433 aa18.24■□□□□ 0.51
CCDC25-211ENST00000524084 FYB1O15117 783 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms