RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 C3P01024 1663 aa8.43□□□□□ -1.06
CTNNA1-239ENST00000523685 ITSN2Q9NZM3 1697 aa8.43□□□□□ -1.06
CTNNA1-239ENST00000523685 LILRB3O75022 631 aa8.43□□□□□ -1.06
CTNNA1-239ENST00000523685 FLIIQ13045 1269 aa8.43□□□□□ -1.06
CTNNA1-239ENST00000523685 PPP2R2DQ66LE6 453 aa8.43□□□□□ -1.06
CTNNA1-239ENST00000523685 GGT6Q6P531 493 aa8.43□□□□□ -1.06
CTNNA1-239ENST00000523685 HLA-CQ95604 372 aa8.43□□□□□ -1.06
CTNNA1-239ENST00000523685 ZMYM3Q14202 1370 aa8.43□□□□□ -1.06
CTNNA1-239ENST00000523685 CNTLNQ9NXG0 1405 aa8.43□□□□□ -1.06
CTNNA1-239ENST00000523685 NUTM2BA6NNL0 878 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-239ENST00000523685 NUTM2EB1AL46 878 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-239ENST00000523685 RFC5P40937 340 aa8.42□□□□□ -1.06
CTNNA1-239ENST00000523685 GUCA2AQ02747 115 aa8.42□□□□□ -1.06
CTNNA1-239ENST00000523685 NUTM2DQ5VT03 806 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-239ENST00000523685 PRPF38BQ5VTL8 546 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-239ENST00000523685 NUTM2AQ8IVF1 878 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-239ENST00000523685 KCTD12Q96CX2 325 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-239ENST00000523685 PCDHGC3Q9UN70 934 aa8.42□□□□□ -1.06
CTNNA1-239ENST00000523685 CCNB3Q8WWL7 1395 aa8.42□□□□□ -1.06
CTNNA1-239ENST00000523685 FYCO1Q9BQS8 1478 aa8.42□□□□□ -1.06
CTNNA1-239ENST00000523685 SYCP2Q9BX26 1530 aa8.42□□□□□ -1.06
CTNNA1-239ENST00000523685 SAMD9LQ8IVG5 1584 aa8.42□□□□□ -1.06
CTNNA1-239ENST00000523685 SETD1BQ9UPS6 1966 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-239ENST00000523685 KIDINS220Q9ULH0 1771 aa8.41□□□□□ -1.06
CTNNA1-239ENST00000523685 GPATCH8Q9UKJ3 1502 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-239ENST00000523685 NCOA1Q15788 1441 aa8.41□□□□□ -1.06
CTNNA1-239ENST00000523685 QPCTQ16769 361 aa8.41□□□□□ -1.06
CTNNA1-239ENST00000523685 THSD4Q6ZMP0 1018 aa8.41□□□□□ -1.06
CTNNA1-239ENST00000523685 CDC42BPAQ5VT25 1732 aa8.4□□□□□ -1.06
CTNNA1-239ENST00000523685 CAMSAP1Q5T5Y3 1602 aa8.4□□□□□ -1.06
CTNNA1-239ENST00000523685 MTUS2Q5JR59 1369 aa8.4□□□□□ -1.06
CTNNA1-239ENST00000523685 ZNF335Q9H4Z2 1342 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-239ENST00000523685 HRCP23327 699 aa8.4□□□□□ -1.06
CTNNA1-239ENST00000523685 APLP1P51693 650 aa8.4□□□□□ -1.06
CTNNA1-239ENST00000523685 PUS10Q3MIT2 529 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-239ENST00000523685 TMEM259Q4ZIN3 620 aa8.4□□□□□ -1.06
CTNNA1-239ENST00000523685 MORN1Q5T089 497 aa8.4□□□□□ -1.06
CTNNA1-239ENST00000523685 FBXO31Q5XUX0 539 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-239ENST00000523685 ZBTB3Q9H5J0 574 aa8.4□□□□□ -1.06
CTNNA1-239ENST00000523685 WBP1LQ9NX94 342 aa8.4□□□□□ -1.06
CTNNA1-239ENST00000523685 NPATQ14207 1427 aa8.39□□□□□ -1.07
CTNNA1-239ENST00000523685 ZNF644Q9H582 1327 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-239ENST00000523685 UBAP1LF5GYI3 381 aa8.39□□□□□ -1.07
CTNNA1-239ENST00000523685 RTL5Q5HYW3 569 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-239ENST00000523685 CABLES1Q8TDN4 633 aa8.39□□□□□ -1.07
CTNNA1-239ENST00000523685 SUPT6HQ7KZ85 1726 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-239ENST00000523685 LTBP4Q8N2S1 1624 aa8.39□□□□□ -1.07
CTNNA1-239ENST00000523685 ATP7AQ04656 1500 aa8.39□□□□□ -1.07
CTNNA1-239ENST00000523685 A2MP01023 1474 aa8.38□□□□□ -1.07
CTNNA1-239ENST00000523685 SOCS7O14512 581 aa8.38□□□□□ -1.07
CTNNA1-239ENST00000523685 MTMR2Q13614 643 aa8.38□□□□□ -1.07
CTNNA1-239ENST00000523685 BANK1Q8NDB2 785 aa8.38□□□□□ -1.07
CTNNA1-239ENST00000523685 PLEKHH2Q8IVE3 1493 aa8.38□□□□□ -1.07
CTNNA1-239ENST00000523685 KIAA1107Q9UPP5 1409 aa8.37□□□□□ -1.07
CTNNA1-239ENST00000523685 SPDYE5A6NIY4 337 aa8.37□□□□□ -1.07
CTNNA1-239ENST00000523685 C6orf229H3BNL8 230 aa8.37□□□□□ -1.07
CTNNA1-239ENST00000523685 PCDH10Q9P2E7 1040 aa8.37□□□□□ -1.07
CTNNA1-239ENST00000523685 SLC27A5Q9Y2P5 690 aa8.37□□□□□ -1.07
CTNNA1-239ENST00000523685 PCDHB3Q9Y5E6 796 aa8.37□□□□□ -1.07
CTNNA1-239ENST00000523685 PTPRKQ15262 1439 aa8.37□□□□□ -1.07
CTNNA1-239ENST00000523685 CLTCQ00610 1675 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-239ENST00000523685 SPATA31D1Q6ZQQ2 1576 aa8.36□□□□□ -1.07
CTNNA1-239ENST00000523685 Q3C1V9 767 aa8.36□□□□□ -1.07
CTNNA1-239ENST00000523685 NYAP1Q6ZVC0 841 aa8.36□□□□□ -1.07
CTNNA1-239ENST00000523685 MROH2AA6NES4 1674 aa8.35□□□□□ -1.07
CTNNA1-239ENST00000523685 KIF3BO15066 747 aa8.35□□□□□ -1.07
CTNNA1-239ENST00000523685 NR1I2O75469 434 aa8.35□□□□□ -1.07
CTNNA1-239ENST00000523685 INO80Q9ULG1 1556 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-239ENST00000523685 IQSEC2Q5JU85 1478 aa8.34□□□□□ -1.07
CTNNA1-239ENST00000523685 AP1G2O75843 785 aa8.34□□□□□ -1.07
CTNNA1-239ENST00000523685 PTPN5P54829 565 aa8.34□□□□□ -1.07
CTNNA1-239ENST00000523685 PIP4K2BP78356 416 aa8.34□□□□□ -1.07
CTNNA1-239ENST00000523685 MCM6Q14566 821 aa8.34□□□□□ -1.07
CTNNA1-239ENST00000523685 SCUBE3Q8IX30 993 aa8.34□□□□□ -1.07
CTNNA1-239ENST00000523685 SYMPKQ92797 1274 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-239ENST00000523685 ZMYND15Q9H091 742 aa8.34□□□□□ -1.07
CTNNA1-239ENST00000523685 SALL2Q9Y467 1007 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-239ENST00000523685 PLXNC1O60486 1568 aa8.34□□□□□ -1.07
CTNNA1-239ENST00000523685 CEP170BQ9Y4F5 1589 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-239ENST00000523685 MYO3AQ8NEV4 1616 aa8.33□□□□□ -1.08
CTNNA1-239ENST00000523685 BLOC1S3Q6QNY0 202 aa8.33□□□□□ -1.08
CTNNA1-239ENST00000523685 PLA2R1Q13018 1463 aa8.32□□□□□ -1.08
CTNNA1-239ENST00000523685 WASHC2CQ9Y4E1 1318 aa8.32□□□□□ -1.08
CTNNA1-239ENST00000523685 TIAM1Q13009 1591 aa8.32□□□□□ -1.08
CTNNA1-239ENST00000523685 BRICD5Q6PL45 260 aa8.32□□□□□ -1.08
CTNNA1-239ENST00000523685 RETREG3Q86VR2 466 aa8.32□□□□□ -1.08
CTNNA1-239ENST00000523685 SNRKQ9NRH2 765 aa8.32□□□□□ -1.08
CTNNA1-239ENST00000523685 DHX29Q7Z478 1369 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-239ENST00000523685 TNRQ92752 1358 aa8.32□□□□□ -1.08
CTNNA1-239ENST00000523685 A2ML1A8K2U0 1454 aa8.32□□□□□ -1.08
CTNNA1-239ENST00000523685 TCOF1Q13428 1488 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-239ENST00000523685 MBD5Q9P267 1494 aa8.32□□□□□ -1.08
CTNNA1-239ENST00000523685 EHBP1L1Q8N3D4 1523 aa8.31□□□□□ -1.08
CTNNA1-239ENST00000523685 CFAP99D6REC4 459 aa8.31□□□□□ -1.08
CTNNA1-239ENST00000523685 FMNL1O95466 1100 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-239ENST00000523685 HELBQ8NG08 1087 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-239ENST00000523685 PRR7Q8TB68 274 aa8.31□□□□□ -1.08
CTNNA1-239ENST00000523685 TSC1Q92574 1164 aa8.31□□□□□ -1.08
CTNNA1-239ENST00000523685 RTEL1-TNFRSF6BF6WH68 1400 aa8.3□□□□□ -1.08
CTNNA1-239ENST00000523685 HSPA1LP34931 641 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms