RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 ARHGEF25Q86VW2 580 aa13.51□□□□□ -0.25
SDC2-207ENST00000522911 KCNH5Q8NCM2 988 aa13.51□□□□□ -0.25
SDC2-207ENST00000522911 CDCA7Q9BWT1 371 aaPredicted RBP13.51□□□□□ -0.25
SDC2-207ENST00000522911 WDR17Q8IZU2 1322 aa13.5□□□□□ -0.25
SDC2-207ENST00000522911 TTC21BQ7Z4L5 1316 aa13.49□□□□□ -0.25
SDC2-207ENST00000522911 NUP188Q5SRE5 1749 aa13.49□□□□□ -0.25
SDC2-207ENST00000522911 ROCK2O75116 1388 aaKnown RBP13.48□□□□□ -0.25
SDC2-207ENST00000522911 NBPF14Q5TI25 921 aa13.48□□□□□ -0.25
SDC2-207ENST00000522911 LRRC37A3O60309 1634 aa13.48□□□□□ -0.25
SDC2-207ENST00000522911 CARD10Q9BWT7 1032 aa13.47□□□□□ -0.25
SDC2-207ENST00000522911 AXIN2Q9Y2T1 843 aa13.47□□□□□ -0.25
SDC2-207ENST00000522911 NFAT5O94916 1531 aa13.47□□□□□ -0.25
SDC2-207ENST00000522911 AKAP12Q02952 1782 aa13.47□□□□□ -0.25
SDC2-207ENST00000522911 USP54Q70EL1 1684 aa13.47□□□□□ -0.25
SDC2-207ENST00000522911 USP31Q70CQ4 1352 aa13.46□□□□□ -0.25
SDC2-207ENST00000522911 DDB1Q16531 1140 aa13.46□□□□□ -0.25
SDC2-207ENST00000522911 PUS7Q96PZ0 661 aaKnown RBP13.46□□□□□ -0.25
SDC2-207ENST00000522911 BCL11BQ9C0K0 894 aaPredicted RBP13.46□□□□□ -0.25
SDC2-207ENST00000522911 TOM1L2Q6ZVM7 507 aa13.45□□□□□ -0.26
SDC2-207ENST00000522911 CCDC7Q96M83 1385 aa13.45□□□□□ -0.26
SDC2-207ENST00000522911 SIN3AQ96ST3 1273 aa13.44□□□□□ -0.26
SDC2-207ENST00000522911 KTN1Q86UP2 1357 aaKnown RBP13.44□□□□□ -0.26
SDC2-207ENST00000522911 SBF2Q86WG5 1849 aa13.43□□□□□ -0.26
SDC2-207ENST00000522911 WNK3Q9BYP7 1800 aa13.43□□□□□ -0.26
SDC2-207ENST00000522911 MON2Q7Z3U7 1717 aa13.42□□□□□ -0.26
SDC2-207ENST00000522911 MARCH10Q8NA82 808 aaPredicted RBP13.42□□□□□ -0.26
SDC2-207ENST00000522911 SPON1Q9HCB6 807 aa13.42□□□□□ -0.26
SDC2-207ENST00000522911 NINLQ9Y2I6 1382 aa13.42□□□□□ -0.26
SDC2-207ENST00000522911 CD163L1Q9NR16 1453 aa13.42□□□□□ -0.26
SDC2-207ENST00000522911 KCNQ2O43526 872 aa13.41□□□□□ -0.26
SDC2-207ENST00000522911 TNS2Q63HR2 1409 aa13.4□□□□□ -0.26
SDC2-207ENST00000522911 ERBB3P21860 1342 aa13.39□□□□□ -0.27
SDC2-207ENST00000522911 EDC4Q6P2E9 1401 aaKnown RBP13.39□□□□□ -0.27
SDC2-207ENST00000522911 EXOC5O00471 708 aa13.39□□□□□ -0.27
SDC2-207ENST00000522911 PROM2Q8N271 834 aa13.39□□□□□ -0.27
SDC2-207ENST00000522911 SLC24A1O60721 1099 aa13.38□□□□□ -0.27
SDC2-207ENST00000522911 UTRNP46939 3433 aa13.38□□□□□ -0.27
SDC2-207ENST00000522911 CASZ1Q86V15 1759 aa13.37□□□□□ -0.27
SDC2-207ENST00000522911 ZBTB7CA1YPR0 619 aa13.37□□□□□ -0.27
SDC2-207ENST00000522911 NEUROD1Q13562 356 aa13.37□□□□□ -0.27
SDC2-207ENST00000522911 CARD11Q9BXL7 1154 aa13.37□□□□□ -0.27
SDC2-207ENST00000522911 ANO8Q9HCE9 1232 aaPredicted RBP13.37□□□□□ -0.27
SDC2-207ENST00000522911 RGPD5Q99666 1765 aa13.36□□□□□ -0.27
SDC2-207ENST00000522911 CSB-PGBD3P0DP91 1061 aa13.35□□□□□ -0.27
SDC2-207ENST00000522911 PTF1AQ7RTS3 328 aa13.35□□□□□ -0.27
SDC2-207ENST00000522911 HDGFL2Q7Z4V5 671 aaPredicted RBP13.35□□□□□ -0.27
SDC2-207ENST00000522911 TERF2IPQ9NYB0 399 aa13.35□□□□□ -0.27
SDC2-207ENST00000522911 NHSQ6T4R5 1651 aa13.34□□□□□ -0.27
SDC2-207ENST00000522911 TXNRD1Q16881 649 aa13.34□□□□□ -0.27
SDC2-207ENST00000522911 IL2RBP14784 551 aa13.33□□□□□ -0.28
SDC2-207ENST00000522911 SLC15A2Q16348 729 aa13.33□□□□□ -0.28
SDC2-207ENST00000522911 NME9Q86XW9 330 aa13.33□□□□□ -0.28
SDC2-207ENST00000522911 SLC12A5Q9H2X9 1139 aa13.33□□□□□ -0.28
SDC2-207ENST00000522911 PPP1R1BQ9UD71 204 aaPredicted RBP13.33□□□□□ -0.28
SDC2-207ENST00000522911 A0A1W2PP64 1363 aa13.32□□□□□ -0.28
SDC2-207ENST00000522911 PTGER2P43116 358 aa13.32□□□□□ -0.28
SDC2-207ENST00000522911 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.32□□□□□ -0.283e-8■■□□□ 13.2
SDC2-207ENST00000522911 TESK2Q96S53 571 aa13.32□□□□□ -0.28
SDC2-207ENST00000522911 SOX12O15370 315 aa13.31□□□□□ -0.28
SDC2-207ENST00000522911 ANKRD24Q8TF21 1146 aa13.31□□□□□ -0.28
SDC2-207ENST00000522911 IP6K1Q92551 441 aa13.31□□□□□ -0.28
SDC2-207ENST00000522911 PAPPAQ13219 1627 aa13.31□□□□□ -0.28
SDC2-207ENST00000522911 TONSLQ96HA7 1378 aa13.31□□□□□ -0.28
SDC2-207ENST00000522911 FAM208AQ9UK61 1670 aaKnown RBP13.31□□□□□ -0.28
SDC2-207ENST00000522911 LTN1O94822 1766 aa13.3□□□□□ -0.28
SDC2-207ENST00000522911 SGIP1Q9BQI5 828 aa13.3□□□□□ -0.28
SDC2-207ENST00000522911 NLRP2Q9NX02 1062 aa13.3□□□□□ -0.28
SDC2-207ENST00000522911 STK32BQ9NY57 414 aa13.3□□□□□ -0.28
SDC2-207ENST00000522911 DCAF8L1A6NGE4 600 aa13.29□□□□□ -0.28
SDC2-207ENST00000522911 TMC1Q8TDI8 760 aa13.29□□□□□ -0.28
SDC2-207ENST00000522911 MTFR1LQ9H019 292 aa13.29□□□□□ -0.28
SDC2-207ENST00000522911 MAP3K5Q99683 1374 aa13.29□□□□□ -0.28
SDC2-207ENST00000522911 YY1P25490 414 aa13.28□□□□□ -0.28
SDC2-207ENST00000522911 PDGFDQ9GZP0 370 aaPredicted RBP13.28□□□□□ -0.28
SDC2-207ENST00000522911 RTL1A6NKG5 1358 aa13.27□□□□□ -0.29
SDC2-207ENST00000522911 SLC27A3Q5K4L6 730 aa13.26□□□□□ -0.29
SDC2-207ENST00000522911 ANKRD36BQ8N2N9 1353 aa13.26□□□□□ -0.29
SDC2-207ENST00000522911 ST20-MTHFSA0A0A6YYL1 179 aa13.25□□□□□ -0.29
SDC2-207ENST00000522911 ZBTB7AO95365 584 aa13.25□□□□□ -0.29
SDC2-207ENST00000522911 SLC16A10Q8TF71 515 aa13.25□□□□□ -0.29
SDC2-207ENST00000522911 COG3Q96JB2 828 aa13.25□□□□□ -0.29
SDC2-207ENST00000522911 BTAF1O14981 1849 aa13.25□□□□□ -0.29
SDC2-207ENST00000522911 MYOM1P52179 1685 aa13.24□□□□□ -0.29
SDC2-207ENST00000522911 KIF24Q5T7B8 1368 aa13.24□□□□□ -0.29
SDC2-207ENST00000522911 CGNL1Q0VF96 1302 aa13.24□□□□□ -0.29
SDC2-207ENST00000522911 MAP3K19Q56UN5 1328 aa13.24□□□□□ -0.29
SDC2-207ENST00000522911 HOXC9P31274 260 aa13.24□□□□□ -0.29
SDC2-207ENST00000522911 QSER1Q2KHR3 1735 aa13.24□□□□□ -0.29
SDC2-207ENST00000522911 GOLGB1Q14789 3259 aaKnown RBP13.23□□□□□ -0.29
SDC2-207ENST00000522911 AKT1S1Q96B36 256 aa13.23□□□□□ -0.29
SDC2-207ENST00000522911 ACSBG1Q96GR2 724 aa13.23□□□□□ -0.29
SDC2-207ENST00000522911 SYT17Q9BSW7 474 aa13.23□□□□□ -0.29
SDC2-207ENST00000522911 LRRC4BQ9NT99 713 aa13.23□□□□□ -0.29
SDC2-207ENST00000522911 COL24A1Q17RW2 1714 aa13.22□□□□□ -0.29
SDC2-207ENST00000522911 HMGB2P26583 209 aaKnown RBP13.21□□□□□ -0.29
SDC2-207ENST00000522911 FHDC1Q9C0D6 1143 aaPredicted RBP13.21□□□□□ -0.29
SDC2-207ENST00000522911 ATF5Q9Y2D1 282 aaPredicted RBP13.21□□□□□ -0.29
SDC2-207ENST00000522911 NSD2O96028 1365 aa13.2□□□□□ -0.3
SDC2-207ENST00000522911 FYB1O15117 783 aa13.2□□□□□ -0.3
SDC2-207ENST00000522911 ZNF827Q17R98 1081 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms