RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 EDC4Q6P2E9 1401 aaKnown RBP26.26■■□□□ 1.79
SPIDR-220ENST00000522900 NFAT5O94916 1531 aa26.25■■□□□ 1.79
SPIDR-220ENST00000522900 TOM1L2Q6ZVM7 507 aa26.25■■□□□ 1.79
SPIDR-220ENST00000522900 TMF1P82094 1093 aa26.24■■□□□ 1.79
SPIDR-220ENST00000522900 PDE3BQ13370 1112 aa26.24■■□□□ 1.79
SPIDR-220ENST00000522900 WDR17Q8IZU2 1322 aa26.23■■□□□ 1.79
SPIDR-220ENST00000522900 FAM196AQ6ZSG2 479 aa26.22■■□□□ 1.79
SPIDR-220ENST00000522900 CCER1Q8TC90 406 aaPredicted RBP26.22■■□□□ 1.79
SPIDR-220ENST00000522900 TRIM37O94972 964 aa26.21■■□□□ 1.79
SPIDR-220ENST00000522900 BAG6P46379 1132 aa26.21■■□□□ 1.79
SPIDR-220ENST00000522900 NINLQ9Y2I6 1382 aa26.2■■□□□ 1.79
SPIDR-220ENST00000522900 EN1Q05925 392 aaPredicted RBP26.2■■□□□ 1.78
SPIDR-220ENST00000522900 CSB-PGBD3P0DP91 1061 aa26.19■■□□□ 1.78
SPIDR-220ENST00000522900 CARD10Q9BWT7 1032 aa26.17■■□□□ 1.78
SPIDR-220ENST00000522900 OVOS2A0A0J9YW53 1432 aa26.15■■□□□ 1.78
SPIDR-220ENST00000522900 OVOS2Q6IE36 1432 aa26.15■■□□□ 1.78
SPIDR-220ENST00000522900 ANKRD36BQ8N2N9 1353 aa26.15■■□□□ 1.78
SPIDR-220ENST00000522900 USP54Q70EL1 1684 aa26.15■■□□□ 1.78
SPIDR-220ENST00000522900 RGPD5Q99666 1765 aa26.15■■□□□ 1.78
SPIDR-220ENST00000522900 FBLN1P23142 703 aa26.13■■□□□ 1.77
SPIDR-220ENST00000522900 DDB1Q16531 1140 aa26.13■■□□□ 1.77
SPIDR-220ENST00000522900 APBA3O96018 575 aa26.12■■□□□ 1.77
SPIDR-220ENST00000522900 EZH2Q15910 746 aaKnown RBP26.12■■□□□ 1.77
SPIDR-220ENST00000522900 PARP4Q9UKK3 1724 aaKnown RBP26.11■■□□□ 1.77
SPIDR-220ENST00000522900 CDCA8Q53HL2 280 aa26.11■■□□□ 1.77
SPIDR-220ENST00000522900 COG3Q96JB2 828 aa26.11■■□□□ 1.77
SPIDR-220ENST00000522900 RGPD1P0DJD0 1748 aa26.11■■□□□ 1.77
SPIDR-220ENST00000522900 CAMKK2Q96RR4 588 aa26.1■■□□□ 1.77
SPIDR-220ENST00000522900 ERBB3P21860 1342 aa26.1■■□□□ 1.77
SPIDR-220ENST00000522900 DISP2A7MBM2 1401 aa26.09■■□□□ 1.77
SPIDR-220ENST00000522900 FYB1O15117 783 aa26.09■■□□□ 1.77
SPIDR-220ENST00000522900 ANKRD24Q8TF21 1146 aa26.09■■□□□ 1.77
SPIDR-220ENST00000522900 NLRP2Q9NX02 1062 aa26.09■■□□□ 1.77
SPIDR-220ENST00000522900 ABCC6O95255 1503 aa26.09■■□□□ 1.77
SPIDR-220ENST00000522900 TNS1Q9HBL0 1735 aaKnown RBP26.08■■□□□ 1.77
SPIDR-220ENST00000522900 MARCH10Q8NA82 808 aaPredicted RBP26.08■■□□□ 1.77
SPIDR-220ENST00000522900 CDCA7Q9BWT1 371 aaPredicted RBP26.08■■□□□ 1.77
SPIDR-220ENST00000522900 GGNBP2Q9H3C7 697 aa26.08■■□□□ 1.77
SPIDR-220ENST00000522900 IP6K1Q92551 441 aa26.07■■□□□ 1.76
SPIDR-220ENST00000522900 CARD14Q9BXL6 1004 aa26.06■■□□□ 1.76
SPIDR-220ENST00000522900 LRRC37A3O60309 1634 aa26.06■■□□□ 1.76
SPIDR-220ENST00000522900 CCDC7Q96M83 1385 aa26.06■■□□□ 1.76
SPIDR-220ENST00000522900 PSDA5PKW4 1024 aaPredicted RBP26.05■■□□□ 1.76
SPIDR-220ENST00000522900 MAP3K19Q56UN5 1328 aa26.05■■□□□ 1.76
SPIDR-220ENST00000522900 PTF1AQ7RTS3 328 aa26.04■■□□□ 1.76
SPIDR-220ENST00000522900 LTN1O94822 1766 aa26.04■■□□□ 1.76
SPIDR-220ENST00000522900 OVOS2A0A0G2JMS6 1433 aa26.04■■□□□ 1.76
SPIDR-220ENST00000522900 EXOC5O00471 708 aa26.03■■□□□ 1.76
SPIDR-220ENST00000522900 LTV1Q96GA3 475 aaPredicted RBP26.03■■□□□ 1.76
SPIDR-220ENST00000522900 HSPA5P11021 654 aaKnown RBP26.02■■□□□ 1.76
SPIDR-220ENST00000522900 SRCAPQ6ZRS2 3230 aa26.01■■□□□ 1.75
SPIDR-220ENST00000522900 C11orf95C9JLR9 678 aaPredicted RBP26.01■■□□□ 1.75
SPIDR-220ENST00000522900 HOXC9P31274 260 aa26.01■■□□□ 1.75
SPIDR-220ENST00000522900 PEAK1Q9H792 1746 aa26.01■■□□□ 1.75
SPIDR-220ENST00000522900 AMPHP49418 695 aa26■■□□□ 1.75
SPIDR-220ENST00000522900 RRS1Q15050 365 aaKnown RBP26■■□□□ 1.75
SPIDR-220ENST00000522900 EIF4G2P78344 907 aaKnown RBP eCLIP25.99■■□□□ 1.75
SPIDR-220ENST00000522900 POLR3GLQ9BT43 218 aa25.99■■□□□ 1.75
SPIDR-220ENST00000522900 WNK3Q9BYP7 1800 aa25.99■■□□□ 1.75
SPIDR-220ENST00000522900 IL2RBP14784 551 aa25.98■■□□□ 1.75
SPIDR-220ENST00000522900 R3HDM1Q15032 1099 aaKnown RBP25.98■■□□□ 1.75
SPIDR-220ENST00000522900 BCL11BQ9C0K0 894 aaPredicted RBP25.96■■□□□ 1.75
SPIDR-220ENST00000522900 MYOM1P52179 1685 aa25.96■■□□□ 1.75
SPIDR-220ENST00000522900 NSD3Q9BZ95 1437 aa25.96■■□□□ 1.75
SPIDR-220ENST00000522900 PARD3Q8TEW0 1356 aa25.95■■□□□ 1.75
SPIDR-220ENST00000522900 BCL9O00512 1426 aa25.94■■□□□ 1.74
SPIDR-220ENST00000522900 TNS2Q63HR2 1409 aa25.94■■□□□ 1.74
SPIDR-220ENST00000522900 KCNQ2O43526 872 aa25.91■■□□□ 1.74
SPIDR-220ENST00000522900 PLSCR1O15162 318 aa25.9■■□□□ 1.74
SPIDR-220ENST00000522900 SBF2Q86WG5 1849 aa25.89■■□□□ 1.74
SPIDR-220ENST00000522900 HSP90AB2PQ58FF8 381 aa25.89■■□□□ 1.74
SPIDR-220ENST00000522900 NBPF6Q5VWK0 638 aa25.89■■□□□ 1.74
SPIDR-220ENST00000522900 ACSBG1Q96GR2 724 aa25.89■■□□□ 1.74
SPIDR-220ENST00000522900 NBPF4Q96M43 638 aa25.89■■□□□ 1.74
SPIDR-220ENST00000522900 RTL1A6NKG5 1358 aa25.88■■□□□ 1.73
SPIDR-220ENST00000522900 PROM2Q8N271 834 aa25.88■■□□□ 1.73
SPIDR-220ENST00000522900 EMILIN1Q9Y6C2 1016 aa25.86■■□□□ 1.73
SPIDR-220ENST00000522900 RREB1Q92766 1687 aa25.86■■□□□ 1.73
SPIDR-220ENST00000522900 NBPF14Q5TI25 921 aa25.85■■□□□ 1.73
SPIDR-220ENST00000522900 USHBP1Q8N6Y0 703 aa25.85■■□□□ 1.73
SPIDR-220ENST00000522900 DDX54Q8TDD1 881 aaKnown RBP25.85■■□□□ 1.73
SPIDR-220ENST00000522900 KIF20BQ96Q89 1820 aa25.85■■□□□ 1.73
SPIDR-220ENST00000522900 PANK3Q9H999 370 aa25.84■■□□□ 1.73
SPIDR-220ENST00000522900 CGNL1Q0VF96 1302 aa25.84■■□□□ 1.73
SPIDR-220ENST00000522900 NUP188Q5SRE5 1749 aa25.83■■□□□ 1.73
SPIDR-220ENST00000522900 INSRP06213 1382 aa25.82■■□□□ 1.72
SPIDR-220ENST00000522900 PPM1GO15355 546 aaPredicted RBP25.81■■□□□ 1.72
SPIDR-220ENST00000522900 FLT4P35916 1363 aa25.81■■□□□ 1.72
SPIDR-220ENST00000522900 FAM208AQ9UK61 1670 aaKnown RBP25.8■■□□□ 1.72
SPIDR-220ENST00000522900 RGPD2P0DJD1 1756 aa25.8■■□□□ 1.72
SPIDR-220ENST00000522900 MEGF6O75095 1541 aa25.79■■□□□ 1.72
SPIDR-220ENST00000522900 TXNRD1Q16881 649 aa25.79■■□□□ 1.72
SPIDR-220ENST00000522900 ZCRB1Q8TBF4 217 aaKnown RBP25.79■■□□□ 1.72
SPIDR-220ENST00000522900 ANO8Q9HCE9 1232 aaPredicted RBP25.79■■□□□ 1.72
SPIDR-220ENST00000522900 KIF24Q5T7B8 1368 aa25.78■■□□□ 1.72
SPIDR-220ENST00000522900 TNNT2P45379 298 aaPredicted RBP25.77■■□□□ 1.72
SPIDR-220ENST00000522900 POLKQ9UBT6 870 aa25.77■■□□□ 1.72
SPIDR-220ENST00000522900 SMG6Q86US8 1419 aaKnown RBP25.76■■□□□ 1.71
SPIDR-220ENST00000522900 LRP5O75197 1615 aa25.75■■□□□ 1.71
SPIDR-220ENST00000522900 RGPD3A6NKT7 1758 aaPredicted RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms