RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 CDCA7LQ96GN5 454 aa19.43■□□□□ 0.7
PCDHA3-201ENST00000522353 CDK5RAP3Q96JB5 506 aa19.42■□□□□ 0.7
PCDHA3-201ENST00000522353 PHF8Q9UPP1 1060 aa19.42■□□□□ 0.7
PCDHA3-201ENST00000522353 IQGAP2Q13576 1575 aa19.42■□□□□ 0.7
PCDHA3-201ENST00000522353 NAT10Q9H0A0 1025 aaKnown RBP19.42■□□□□ 0.7
PCDHA3-201ENST00000522353 SIL1Q9H173 461 aa19.42■□□□□ 0.7
PCDHA3-201ENST00000522353 ODF2Q5BJF6 829 aa19.42■□□□□ 0.7
PCDHA3-201ENST00000522353 TMOD3Q9NYL9 352 aa19.42■□□□□ 0.7
PCDHA3-201ENST00000522353 SUPT6HQ7KZ85 1726 aaKnown RBP19.41■□□□□ 0.7
PCDHA3-201ENST00000522353 ARHGEF11O15085 1522 aa19.41■□□□□ 0.7
PCDHA3-201ENST00000522353 TMEM132AQ24JP5 1023 aa19.41■□□□□ 0.7
PCDHA3-201ENST00000522353 AMOTQ4VCS5 1084 aa19.4■□□□□ 0.7
PCDHA3-201ENST00000522353 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.4■□□□□ 0.7
PCDHA3-201ENST00000522353 NFE2L2Q16236 605 aa19.4■□□□□ 0.7
PCDHA3-201ENST00000522353 TRIM22Q8IYM9 498 aa19.4■□□□□ 0.7
PCDHA3-201ENST00000522353 ATF7IPQ6VMQ6 1270 aa19.4■□□□□ 0.7
PCDHA3-201ENST00000522353 AMOTL2Q9Y2J4 779 aa19.4■□□□□ 0.7
PCDHA3-201ENST00000522353 C1orf115Q9H7X2 142 aa19.39■□□□□ 0.7
PCDHA3-201ENST00000522353 TMOD2Q9NZR1 351 aa19.39■□□□□ 0.7
PCDHA3-201ENST00000522353 ATP2B1P20020 1258 aa19.39■□□□□ 0.69
PCDHA3-201ENST00000522353 NEK4P51957 841 aa19.39■□□□□ 0.69
PCDHA3-201ENST00000522353 LRPPRCP42704 1394 aaKnown RBP19.39■□□□□ 0.69
PCDHA3-201ENST00000522353 TIAM1Q13009 1591 aa19.39■□□□□ 0.69
PCDHA3-201ENST00000522353 HOMER1Q86YM7 354 aa19.39■□□□□ 0.69
PCDHA3-201ENST00000522353 WAPLQ7Z5K2 1190 aa19.39■□□□□ 0.69
PCDHA3-201ENST00000522353 BICDL1Q6ZP65 573 aa19.38■□□□□ 0.69
PCDHA3-201ENST00000522353 SRGAP3O43295 1099 aa19.38■□□□□ 0.69
PCDHA3-201ENST00000522353 AKNAQ7Z591 1439 aa19.38■□□□□ 0.69
PCDHA3-201ENST00000522353 ZPR1O75312 459 aa19.38■□□□□ 0.69
PCDHA3-201ENST00000522353 CDK13Q14004 1512 aaKnown RBP19.38■□□□□ 0.69
PCDHA3-201ENST00000522353 ZSCAN29Q8IWY8 852 aaPredicted RBP19.38■□□□□ 0.69
PCDHA3-201ENST00000522353 NGLY1Q96IV0 654 aa19.38■□□□□ 0.69
PCDHA3-201ENST00000522353 ANKRD1Q15327 319 aa19.37■□□□□ 0.69
PCDHA3-201ENST00000522353 RABEP1Q15276 862 aa19.37■□□□□ 0.69
PCDHA3-201ENST00000522353 FOXO3O43524 673 aa19.37■□□□□ 0.69
PCDHA3-201ENST00000522353 JMYQ8N9B5 988 aa19.37■□□□□ 0.69
PCDHA3-201ENST00000522353 ZNF592Q92610 1267 aa19.37■□□□□ 0.69
PCDHA3-201ENST00000522353 PDZRN3Q9UPQ7 1066 aa19.37■□□□□ 0.69
PCDHA3-201ENST00000522353 RSPH6AQ9H0K4 717 aa19.37■□□□□ 0.69
PCDHA3-201ENST00000522353 NSD3Q9BZ95 1437 aa19.36■□□□□ 0.69
PCDHA3-201ENST00000522353 ADAMTS2O95450 1211 aa19.36■□□□□ 0.69
PCDHA3-201ENST00000522353 FKBP4Q02790 459 aaKnown RBP eCLIP19.36■□□□□ 0.69
PCDHA3-201ENST00000522353 CTNNA3Q9UI47 895 aa19.36■□□□□ 0.69
PCDHA3-201ENST00000522353 NAP1L1P55209 391 aaKnown RBP19.36■□□□□ 0.69
PCDHA3-201ENST00000522353 ZNF396Q96N95 335 aaPredicted RBP19.36■□□□□ 0.69
PCDHA3-201ENST00000522353 KRT18P05783 430 aaKnown RBP19.36■□□□□ 0.69
PCDHA3-201ENST00000522353 SOGA3Q5TF21 947 aa19.36■□□□□ 0.69
PCDHA3-201ENST00000522353 DENND4BO75064 1496 aaPredicted RBP19.35■□□□□ 0.69
PCDHA3-201ENST00000522353 CYP46A1Q9Y6A2 500 aa19.35■□□□□ 0.69
PCDHA3-201ENST00000522353 PTCD1O75127 700 aaKnown RBP19.35■□□□□ 0.69
PCDHA3-201ENST00000522353 RAI14Q9P0K7 980 aa19.35■□□□□ 0.69
PCDHA3-201ENST00000522353 GRIN2AQ12879 1464 aa19.35■□□□□ 0.69
PCDHA3-201ENST00000522353 KINO60870 393 aaKnown RBP19.35■□□□□ 0.69
PCDHA3-201ENST00000522353 AACSQ86V21 672 aa19.35■□□□□ 0.69
PCDHA3-201ENST00000522353 CCDC69A6NI79 296 aa19.34■□□□□ 0.69
PCDHA3-201ENST00000522353 LRP2BPQ9P2M1 347 aa19.34■□□□□ 0.69
PCDHA3-201ENST00000522353 KDM4AO75164 1064 aa19.33■□□□□ 0.69
PCDHA3-201ENST00000522353 PIP4K2AP48426 406 aaPredicted RBP19.33■□□□□ 0.69
PCDHA3-201ENST00000522353 CADPS2Q86UW7 1296 aa19.33■□□□□ 0.69
PCDHA3-201ENST00000522353 RPAP2Q8IXW5 612 aaPredicted RBP19.33■□□□□ 0.69
PCDHA3-201ENST00000522353 LARP1Q6PKG0 1096 aaKnown RBP19.33■□□□□ 0.68
PCDHA3-201ENST00000522353 TDO2P48775 406 aa19.32■□□□□ 0.68
PCDHA3-201ENST00000522353 STK38Q15208 465 aa19.32■□□□□ 0.68
PCDHA3-201ENST00000522353 CEBPAP49715 358 aaPredicted RBP19.32■□□□□ 0.68
PCDHA3-201ENST00000522353 IDI1Q13907 227 aa19.32■□□□□ 0.68
PCDHA3-201ENST00000522353 HSP90AB3PQ58FF7 597 aa19.32■□□□□ 0.68
PCDHA3-201ENST00000522353 PLB1Q6P1J6 1458 aa19.32■□□□□ 0.68
PCDHA3-201ENST00000522353 TMPOP42166 694 aaKnown RBP19.32■□□□□ 0.68
PCDHA3-201ENST00000522353 HSP90AA2PQ14568 343 aaPredicted RBP19.32■□□□□ 0.68
PCDHA3-201ENST00000522353 WASLO00401 505 aaPredicted RBP19.32■□□□□ 0.68
PCDHA3-201ENST00000522353 EXOC5O00471 708 aa19.31■□□□□ 0.68
PCDHA3-201ENST00000522353 MVPQ14764 893 aaKnown RBP19.31■□□□□ 0.68
PCDHA3-201ENST00000522353 DNAJC5BQ9UF47 199 aa19.31■□□□□ 0.68
PCDHA3-201ENST00000522353 ZFYVE27Q5T4F4 411 aa19.31■□□□□ 0.68
PCDHA3-201ENST00000522353 UBAC1Q9BSL1 405 aa19.31■□□□□ 0.68
PCDHA3-201ENST00000522353 BCAR3O75815 825 aa19.31■□□□□ 0.68
PCDHA3-201ENST00000522353 AKAP2Q9Y2D5 859 aa19.31■□□□□ 0.68
PCDHA3-201ENST00000522353 FBXO31Q5XUX0 539 aaPredicted RBP19.31■□□□□ 0.68
PCDHA3-201ENST00000522353 TAF7Q15545 349 aaPredicted RBP19.3■□□□□ 0.68
PCDHA3-201ENST00000522353 MBD3O95983 291 aa19.3■□□□□ 0.68
PCDHA3-201ENST00000522353 CCDC173Q0VFZ6 552 aa19.3■□□□□ 0.68
PCDHA3-201ENST00000522353 ZNF287Q9HBT7 754 aa19.3■□□□□ 0.68
PCDHA3-201ENST00000522353 WDHD1O75717 1129 aaPredicted RBP19.3■□□□□ 0.68
PCDHA3-201ENST00000522353 CDKL5O76039 1030 aa19.3■□□□□ 0.68
PCDHA3-201ENST00000522353 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.3■□□□□ 0.68
PCDHA3-201ENST00000522353 RDXP35241 583 aaKnown RBP19.29■□□□□ 0.68
PCDHA3-201ENST00000522353 METTL24Q5JXM2 366 aa19.29■□□□□ 0.68
PCDHA3-201ENST00000522353 IFIT1P09914 478 aaKnown RBP19.29■□□□□ 0.68
PCDHA3-201ENST00000522353 KIF14Q15058 1648 aa19.29■□□□□ 0.68
PCDHA3-201ENST00000522353 FILIP1LQ4L180 1135 aa19.29■□□□□ 0.68
PCDHA3-201ENST00000522353 DUSP27Q5VZP5 1158 aa19.29■□□□□ 0.68
PCDHA3-201ENST00000522353 LETM1O95202 739 aaPredicted RBP19.29■□□□□ 0.68
PCDHA3-201ENST00000522353 MAGEC2Q9UBF1 373 aaPredicted RBP19.29■□□□□ 0.68
PCDHA3-201ENST00000522353 CAVIN4Q5BKX8 364 aa19.28■□□□□ 0.68
PCDHA3-201ENST00000522353 NUP133Q8WUM0 1156 aa19.28■□□□□ 0.68
PCDHA3-201ENST00000522353 CAMSAP2Q08AD1 1489 aa19.28■□□□□ 0.68
PCDHA3-201ENST00000522353 KRT32Q14532 448 aa19.28■□□□□ 0.68
PCDHA3-201ENST00000522353 IDH1O75874 414 aaKnown RBP19.28■□□□□ 0.68
PCDHA3-201ENST00000522353 NOL7Q9UMY1 257 aaKnown RBP19.28■□□□□ 0.68
PCDHA3-201ENST00000522353 MPRIPQ6WCQ1 1025 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms