RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 TECPR2O15040 1411 aa11.88□□□□□ -0.51
VPS13B-210ENST00000521932 YTHDC2Q9H6S0 1430 aaKnown RBP11.88□□□□□ -0.51
VPS13B-210ENST00000521932 ASXL1Q8IXJ9 1541 aa11.88□□□□□ -0.51
VPS13B-210ENST00000521932 PBX2P40425 430 aa11.88□□□□□ -0.51
VPS13B-210ENST00000521932 GPRASP1Q5JY77 1395 aa11.88□□□□□ -0.51
VPS13B-210ENST00000521932 CPS1P31327 1500 aa11.87□□□□□ -0.51
VPS13B-210ENST00000521932 TRPM1Q7Z4N2 1603 aa11.87□□□□□ -0.51
VPS13B-210ENST00000521932 ANKRD13DQ6ZTN6 518 aa11.87□□□□□ -0.51
VPS13B-210ENST00000521932 NKTRP30414 1462 aaKnown RBP11.87□□□□□ -0.51
VPS13B-210ENST00000521932 STRCP1A6NGW2 1772 aa11.87□□□□□ -0.51
VPS13B-210ENST00000521932 NCOA3Q9Y6Q9 1424 aa11.86□□□□□ -0.51
VPS13B-210ENST00000521932 PSEN2P49810 448 aa11.86□□□□□ -0.51
VPS13B-210ENST00000521932 MAP3K9P80192 1104 aa11.86□□□□□ -0.51
VPS13B-210ENST00000521932 ROCK2O75116 1388 aaKnown RBP11.86□□□□□ -0.51
VPS13B-210ENST00000521932 RALGAPBQ86X10 1494 aa11.86□□□□□ -0.51
VPS13B-210ENST00000521932 XRN1Q8IZH2 1706 aaKnown RBP11.86□□□□□ -0.51
VPS13B-210ENST00000521932 PTCH1Q13635 1447 aa11.86□□□□□ -0.51
VPS13B-210ENST00000521932 ROBO2Q9HCK4 1378 aa11.85□□□□□ -0.51
VPS13B-210ENST00000521932 FOSBP53539 338 aa11.85□□□□□ -0.51
VPS13B-210ENST00000521932 PPP4R3BQ5MIZ7 849 aa11.85□□□□□ -0.51
VPS13B-210ENST00000521932 DMRTA1Q5VZB9 504 aa11.85□□□□□ -0.51
VPS13B-210ENST00000521932 PROSER2Q86WR7 435 aaPredicted RBP11.85□□□□□ -0.51
VPS13B-210ENST00000521932 ZNF454Q8N9F8 522 aa11.85□□□□□ -0.51
VPS13B-210ENST00000521932 STK26Q9P289 416 aa11.85□□□□□ -0.51
VPS13B-210ENST00000521932 TRAK1Q9UPV9 953 aa11.85□□□□□ -0.51
VPS13B-210ENST00000521932 LRRC7Q96NW7 1537 aa11.85□□□□□ -0.51
VPS13B-210ENST00000521932 FAM135BQ49AJ0 1406 aa11.85□□□□□ -0.51
VPS13B-210ENST00000521932 DPYSL4O14531 572 aa11.84□□□□□ -0.51
VPS13B-210ENST00000521932 ARHGAP33O14559 1287 aa11.84□□□□□ -0.51
VPS13B-210ENST00000521932 CARD11Q9BXL7 1154 aa11.84□□□□□ -0.51
VPS13B-210ENST00000521932 DLC1Q96QB1 1528 aa11.84□□□□□ -0.51
VPS13B-210ENST00000521932 TSHZ2Q9NRE2 1034 aa11.83□□□□□ -0.52
VPS13B-210ENST00000521932 KNDC1Q76NI1 1749 aa11.83□□□□□ -0.52
VPS13B-210ENST00000521932 TMEM94Q12767 1356 aa11.82□□□□□ -0.52
VPS13B-210ENST00000521932 WAPLQ7Z5K2 1190 aa11.82□□□□□ -0.52
VPS13B-210ENST00000521932 CERKQ8TCT0 537 aa11.82□□□□□ -0.52
VPS13B-210ENST00000521932 ZEB1P37275 1124 aaPredicted RBP11.81□□□□□ -0.52
VPS13B-210ENST00000521932 RBM33Q96EV2 1170 aaKnown RBP11.81□□□□□ -0.52
VPS13B-210ENST00000521932 PRAM1Q96QH2 718 aa11.81□□□□□ -0.52
VPS13B-210ENST00000521932 C19orf44Q9H6X5 657 aa11.8□□□□□ -0.52
VPS13B-210ENST00000521932 IQSEC2Q5JU85 1478 aa11.8□□□□□ -0.52
VPS13B-210ENST00000521932 PLEKHH1Q9ULM0 1364 aa11.79□□□□□ -0.52
VPS13B-210ENST00000521932 KCNK17Q96T54 332 aa11.79□□□□□ -0.52
VPS13B-210ENST00000521932 POGKQ9P215 609 aa11.79□□□□□ -0.52
VPS13B-210ENST00000521932 ADAM33Q9BZ11 813 aa11.78□□□□□ -0.52
VPS13B-210ENST00000521932 XIRP1Q702N8 1843 aaKnown RBP11.78□□□□□ -0.52
VPS13B-210ENST00000521932 EIF3AQ14152 1382 aaKnown RBP11.78□□□□□ -0.52
VPS13B-210ENST00000521932 ADGRD1Q6QNK2 874 aa11.77□□□□□ -0.53
VPS13B-210ENST00000521932 BCL2L12Q9HB09 334 aa11.77□□□□□ -0.53
VPS13B-210ENST00000521932 PCDHGA10Q9Y5H3 936 aa11.77□□□□□ -0.53
VPS13B-210ENST00000521932 CENPJQ9HC77 1338 aaPredicted RBP11.77□□□□□ -0.53
VPS13B-210ENST00000521932 MSH6P52701 1360 aa11.77□□□□□ -0.53
VPS13B-210ENST00000521932 ARHGEF28Q8N1W1 1705 aaKnown RBP11.77□□□□□ -0.53
VPS13B-210ENST00000521932 ADGRL3Q9HAR2 1447 aa11.77□□□□□ -0.53
VPS13B-210ENST00000521932 C14orf37Q86TY3 774 aa11.76□□□□□ -0.53
VPS13B-210ENST00000521932 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.76□□□□□ -0.53
VPS13B-210ENST00000521932 DCCP43146 1447 aa11.76□□□□□ -0.53
VPS13B-210ENST00000521932 ST20-MTHFSA0A0A6YYL1 179 aa11.75□□□□□ -0.53
VPS13B-210ENST00000521932 SAFB2Q14151 953 aaKnown RBP eCLIP11.75□□□□□ -0.53
VPS13B-210ENST00000521932 RNF166Q96A37 237 aaPredicted RBP11.75□□□□□ -0.53
VPS13B-210ENST00000521932 USP47Q96K76 1375 aa11.75□□□□□ -0.53
VPS13B-210ENST00000521932 SBNO2Q9Y2G9 1366 aa11.75□□□□□ -0.53
VPS13B-210ENST00000521932 ATF3P18847 181 aa11.74□□□□□ -0.53
VPS13B-210ENST00000521932 EIF4G2P78344 907 aaKnown RBP eCLIP11.74□□□□□ -0.53
VPS13B-210ENST00000521932 E2F4Q16254 413 aa11.74□□□□□ -0.53
VPS13B-210ENST00000521932 ZDHHC16Q969W1 377 aa11.74□□□□□ -0.53
VPS13B-210ENST00000521932 TESK2Q96S53 571 aa11.74□□□□□ -0.53
VPS13B-210ENST00000521932 WASLO00401 505 aaPredicted RBP11.73□□□□□ -0.53
VPS13B-210ENST00000521932 TOM1O60784 492 aa11.73□□□□□ -0.53
VPS13B-210ENST00000521932 NALCNQ8IZF0 1738 aa11.73□□□□□ -0.53
VPS13B-210ENST00000521932 MINK1Q8N4C8 1332 aaPredicted RBP11.73□□□□□ -0.53
VPS13B-210ENST00000521932 ADGRB2O60241 1585 aa11.72□□□□□ -0.53
VPS13B-210ENST00000521932 HRO43593 1189 aa11.72□□□□□ -0.53
VPS13B-210ENST00000521932 HIRIP3Q9BW71 556 aaPredicted RBP11.72□□□□□ -0.53
VPS13B-210ENST00000521932 SLAIN2Q9P270 581 aa11.72□□□□□ -0.53
VPS13B-210ENST00000521932 CDC42BPGQ6DT37 1551 aa11.71□□□□□ -0.53
VPS13B-210ENST00000521932 TK2O00142 265 aa11.71□□□□□ -0.53
VPS13B-210ENST00000521932 HSPA5P11021 654 aaKnown RBP11.71□□□□□ -0.53
VPS13B-210ENST00000521932 PTGER2P43116 358 aa11.71□□□□□ -0.53
VPS13B-210ENST00000521932 PDIA6Q15084 440 aa11.71□□□□□ -0.53
VPS13B-210ENST00000521932 CDK19Q9BWU1 502 aa11.71□□□□□ -0.53
VPS13B-210ENST00000521932 PUS7Q96PZ0 661 aaKnown RBP11.7□□□□□ -0.54
VPS13B-210ENST00000521932 MST1RQ04912 1400 aa11.69□□□□□ -0.54
VPS13B-210ENST00000521932 QRICH2Q9H0J4 1663 aa11.69□□□□□ -0.54
VPS13B-210ENST00000521932 EVC2Q86UK5 1308 aa11.69□□□□□ -0.54
VPS13B-210ENST00000521932 UBAP1LF5GYI3 381 aa11.69□□□□□ -0.54
VPS13B-210ENST00000521932 PHF14O94880 888 aa11.69□□□□□ -0.54
VPS13B-210ENST00000521932 WDR70Q9NW82 654 aa11.69□□□□□ -0.54
VPS13B-210ENST00000521932 ARIH1Q9Y4X5 557 aaPredicted RBP11.69□□□□□ -0.54
VPS13B-210ENST00000521932 PTPREP23469 700 aa11.68□□□□□ -0.54
VPS13B-210ENST00000521932 TMF1P82094 1093 aa11.68□□□□□ -0.54
VPS13B-210ENST00000521932 DDX12PQ92771 950 aa11.68□□□□□ -0.54
VPS13B-210ENST00000521932 VPS9D1Q9Y2B5 631 aa11.68□□□□□ -0.54
VPS13B-210ENST00000521932 C1orf167Q5SNV9 1468 aa11.68□□□□□ -0.54
VPS13B-210ENST00000521932 TYW1BQ6NUM6 668 aa11.67□□□□□ -0.54
VPS13B-210ENST00000521932 ANKARQ7Z5J8 1434 aa11.67□□□□□ -0.54
VPS13B-210ENST00000521932 TULP4Q9NRJ4 1543 aa11.66□□□□□ -0.54
VPS13B-210ENST00000521932 PRR36Q9H6K5 1346 aa11.66□□□□□ -0.54
VPS13B-210ENST00000521932 NUTM2FA1L443 756 aa11.66□□□□□ -0.54
VPS13B-210ENST00000521932 COL9A1P20849 921 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms