RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 NUP188Q5SRE5 1749 aa21.29■■□□□ 1
PRKDC-204ENST00000521331 PLSCR1O15162 318 aa21.28■■□□□ 1
PRKDC-204ENST00000521331 NEUROD1Q13562 356 aa21.28■■□□□ 1
PRKDC-204ENST00000521331 BCL11BQ9C0K0 894 aaPredicted RBP21.27■■□□□ 1
PRKDC-204ENST00000521331 PEAK1Q9H792 1746 aa21.26■□□□□ 0.99
PRKDC-204ENST00000521331 LRRC37A3O60309 1634 aa21.26■□□□□ 0.99
PRKDC-204ENST00000521331 CARD10Q9BWT7 1032 aa21.26■□□□□ 0.99
PRKDC-204ENST00000521331 COL18A1P39060 1754 aa21.25■□□□□ 0.99
PRKDC-204ENST00000521331 KTN1Q86UP2 1357 aaKnown RBP21.25■□□□□ 0.99
PRKDC-204ENST00000521331 BCL9O00512 1426 aa21.25■□□□□ 0.99
PRKDC-204ENST00000521331 CSB-PGBD3P0DP91 1061 aa21.25■□□□□ 0.99
PRKDC-204ENST00000521331 SPON1Q9HCB6 807 aa21.25■□□□□ 0.99
PRKDC-204ENST00000521331 SOX12O15370 315 aa21.24■□□□□ 0.99
PRKDC-204ENST00000521331 MARCH10Q8NA82 808 aaPredicted RBP21.23■□□□□ 0.99
PRKDC-204ENST00000521331 SBNO2Q9Y2G9 1366 aa21.23■□□□□ 0.99
PRKDC-204ENST00000521331 KCNQ2O43526 872 aa21.22■□□□□ 0.99
PRKDC-204ENST00000521331 PPP1R1BQ9UD71 204 aaPredicted RBP21.22■□□□□ 0.99
PRKDC-204ENST00000521331 RGPD3A6NKT7 1758 aaPredicted RBP21.21■□□□□ 0.99
PRKDC-204ENST00000521331 RGPD4Q7Z3J3 1758 aa21.21■□□□□ 0.99
PRKDC-204ENST00000521331 NFAT5O94916 1531 aa21.21■□□□□ 0.99
PRKDC-204ENST00000521331 ABCC6O95255 1503 aa21.21■□□□□ 0.99
PRKDC-204ENST00000521331 CCDC7Q96M83 1385 aa21.21■□□□□ 0.99
PRKDC-204ENST00000521331 AKAP12Q02952 1782 aa21.2■□□□□ 0.99
PRKDC-204ENST00000521331 EXOC5O00471 708 aa21.19■□□□□ 0.98
PRKDC-204ENST00000521331 USP31Q70CQ4 1352 aa21.19■□□□□ 0.98
PRKDC-204ENST00000521331 PTF1AQ7RTS3 328 aa21.18■□□□□ 0.98
PRKDC-204ENST00000521331 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.17■□□□□ 0.98
PRKDC-204ENST00000521331 CARD11Q9BXL7 1154 aa21.17■□□□□ 0.98
PRKDC-204ENST00000521331 ANO8Q9HCE9 1232 aaPredicted RBP21.17■□□□□ 0.98
PRKDC-204ENST00000521331 NINLQ9Y2I6 1382 aa21.17■□□□□ 0.98
PRKDC-204ENST00000521331 WNK3Q9BYP7 1800 aa21.17■□□□□ 0.98
PRKDC-204ENST00000521331 SBF2Q86WG5 1849 aa21.15■□□□□ 0.98
PRKDC-204ENST00000521331 PROM2Q8N271 834 aa21.15■□□□□ 0.98
PRKDC-204ENST00000521331 TNS2Q63HR2 1409 aa21.14■□□□□ 0.98
PRKDC-204ENST00000521331 DCAF8L1A6NGE4 600 aa21.14■□□□□ 0.97
PRKDC-204ENST00000521331 HDGFL2Q7Z4V5 671 aaPredicted RBP21.14■□□□□ 0.97
PRKDC-204ENST00000521331 MON2Q7Z3U7 1717 aa21.13■□□□□ 0.97
PRKDC-204ENST00000521331 ERBB3P21860 1342 aa21.13■□□□□ 0.97
PRKDC-204ENST00000521331 NME9Q86XW9 330 aa21.13■□□□□ 0.97
PRKDC-204ENST00000521331 TMC1Q8TDI8 760 aa21.13■□□□□ 0.97
PRKDC-204ENST00000521331 CD163L1Q9NR16 1453 aa21.13■□□□□ 0.97
PRKDC-204ENST00000521331 TXNRD1Q16881 649 aa21.12■□□□□ 0.97
PRKDC-204ENST00000521331 NLRP2Q9NX02 1062 aa21.11■□□□□ 0.97
PRKDC-204ENST00000521331 STK32BQ9NY57 414 aa21.11■□□□□ 0.97
PRKDC-204ENST00000521331 EDC4Q6P2E9 1401 aaKnown RBP21.11■□□□□ 0.97
PRKDC-204ENST00000521331 YY1P25490 414 aa21.1■□□□□ 0.97
PRKDC-204ENST00000521331 PUS7Q96PZ0 661 aaKnown RBP21.1■□□□□ 0.97
PRKDC-204ENST00000521331 TERF2IPQ9NYB0 399 aa21.1■□□□□ 0.97
PRKDC-204ENST00000521331 RGPD5Q99666 1765 aa21.1■□□□□ 0.97
PRKDC-204ENST00000521331 USP54Q70EL1 1684 aa21.09■□□□□ 0.97
PRKDC-204ENST00000521331 IL2RBP14784 551 aa21.09■□□□□ 0.97
PRKDC-204ENST00000521331 SLC12A5Q9H2X9 1139 aa21.09■□□□□ 0.97
PRKDC-204ENST00000521331 CASZ1Q86V15 1759 aa21.08■□□□□ 0.96
PRKDC-204ENST00000521331 ZBTB7AO95365 584 aa21.07■□□□□ 0.96
PRKDC-204ENST00000521331 SLC15A2Q16348 729 aa21.07■□□□□ 0.96
PRKDC-204ENST00000521331 ANKRD24Q8TF21 1146 aa21.07■□□□□ 0.96
PRKDC-204ENST00000521331 TONSLQ96HA7 1378 aa21.07■□□□□ 0.96
PRKDC-204ENST00000521331 PDGFDQ9GZP0 370 aaPredicted RBP21.06■□□□□ 0.96
PRKDC-204ENST00000521331 ACSBG1Q96GR2 724 aa21.05■□□□□ 0.96
PRKDC-204ENST00000521331 A0A1W2PP64 1363 aa21.05■□□□□ 0.96
PRKDC-204ENST00000521331 PTGER2P43116 358 aa21.04■□□□□ 0.96
PRKDC-204ENST00000521331 NHSQ6T4R5 1651 aa21.02■□□□□ 0.96
PRKDC-204ENST00000521331 SLC24A1O60721 1099 aa21.02■□□□□ 0.96
PRKDC-204ENST00000521331 MTFR1LQ9H019 292 aa21.02■□□□□ 0.96
PRKDC-204ENST00000521331 ATF5Q9Y2D1 282 aaPredicted RBP21.02■□□□□ 0.96
PRKDC-204ENST00000521331 IP6K1Q92551 441 aa21.01■□□□□ 0.95
PRKDC-204ENST00000521331 LTN1O94822 1766 aa20.99■□□□□ 0.95
PRKDC-204ENST00000521331 TESK2Q96S53 571 aa20.98■□□□□ 0.95
PRKDC-204ENST00000521331 COG3Q96JB2 828 aa20.97■□□□□ 0.95
PRKDC-204ENST00000521331 ST20-MTHFSA0A0A6YYL1 179 aa20.96■□□□□ 0.95
PRKDC-204ENST00000521331 SGIP1Q9BQI5 828 aa20.96■□□□□ 0.95
PRKDC-204ENST00000521331 MYOM1P52179 1685 aa20.96■□□□□ 0.95
PRKDC-204ENST00000521331 DDX54Q8TDD1 881 aaKnown RBP20.95■□□□□ 0.94
PRKDC-204ENST00000521331 LTV1Q96GA3 475 aaPredicted RBP20.95■□□□□ 0.94
PRKDC-204ENST00000521331 SYT17Q9BSW7 474 aa20.95■□□□□ 0.94
PRKDC-204ENST00000521331 FHDC1Q9C0D6 1143 aaPredicted RBP20.95■□□□□ 0.94
PRKDC-204ENST00000521331 SLC27A3Q5K4L6 730 aa20.94■□□□□ 0.94
PRKDC-204ENST00000521331 MAP3K19Q56UN5 1328 aa20.94■□□□□ 0.94
PRKDC-204ENST00000521331 PAPPAQ13219 1627 aa20.93■□□□□ 0.94
PRKDC-204ENST00000521331 HOXC9P31274 260 aa20.93■□□□□ 0.94
PRKDC-204ENST00000521331 AMPHP49418 695 aa20.93■□□□□ 0.94
PRKDC-204ENST00000521331 ZNF827Q17R98 1081 aa20.92■□□□□ 0.94
PRKDC-204ENST00000521331 ARXQ96QS3 562 aa20.92■□□□□ 0.94
PRKDC-204ENST00000521331 LRRC4BQ9NT99 713 aa20.92■□□□□ 0.94
PRKDC-204ENST00000521331 FAM208AQ9UK61 1670 aaKnown RBP20.92■□□□□ 0.94
PRKDC-204ENST00000521331 BTAF1O14981 1849 aa20.91■□□□□ 0.94
PRKDC-204ENST00000521331 ANKRD36BQ8N2N9 1353 aa20.91■□□□□ 0.94
PRKDC-204ENST00000521331 RTL1A6NKG5 1358 aa20.89■□□□□ 0.93
PRKDC-204ENST00000521331 MAP3K5Q99683 1374 aa20.89■□□□□ 0.93
PRKDC-204ENST00000521331 AKT1S1Q96B36 256 aa20.89■□□□□ 0.93
PRKDC-204ENST00000521331 ZCRB1Q8TBF4 217 aaKnown RBP20.88■□□□□ 0.93
PRKDC-204ENST00000521331 SLC16A10Q8TF71 515 aa20.88■□□□□ 0.93
PRKDC-204ENST00000521331 PRIM1P49642 420 aaKnown RBP20.87■□□□□ 0.93
PRKDC-204ENST00000521331 SYTL4Q96C24 671 aaPredicted RBP20.87■□□□□ 0.93
PRKDC-204ENST00000521331 FBLN1P23142 703 aa20.86■□□□□ 0.93
PRKDC-204ENST00000521331 TMF1P82094 1093 aa20.86■□□□□ 0.93
PRKDC-204ENST00000521331 UTRNP46939 3433 aa20.86■□□□□ 0.93
PRKDC-204ENST00000521331 CGNL1Q0VF96 1302 aa20.85■□□□□ 0.93
PRKDC-204ENST00000521331 FYB1O15117 783 aa20.84■□□□□ 0.93
PRKDC-204ENST00000521331 POLD1P28340 1107 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms