RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 MAP7D2Q96T17 732 aa15.67■□□□□ 0.1
TRAPPC9-208ENST00000520857 CWC22Q9HCG8 908 aaKnown RBP15.67■□□□□ 0.1
TRAPPC9-208ENST00000520857 VAMP4O75379 141 aa15.67■□□□□ 0.1
TRAPPC9-208ENST00000520857 GSPT1P15170 499 aaKnown RBP15.67■□□□□ 0.1
TRAPPC9-208ENST00000520857 PLEKHM2Q8IWE5 1019 aa15.67■□□□□ 0.1
TRAPPC9-208ENST00000520857 RILPL2Q969X0 211 aa15.67■□□□□ 0.1
TRAPPC9-208ENST00000520857 MRPL50Q8N5N7 158 aaKnown RBP15.67■□□□□ 0.1
TRAPPC9-208ENST00000520857 SYAP1Q96A49 352 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC9-208ENST00000520857 PHACTR3Q96KR7 559 aa15.67■□□□□ 0.1
TRAPPC9-208ENST00000520857 GDPD2Q9HCC8 539 aa15.66■□□□□ 0.1
TRAPPC9-208ENST00000520857 PPIP5K1Q6PFW1 1433 aa15.66■□□□□ 0.1
TRAPPC9-208ENST00000520857 CFAP65Q6ZU64 1925 aaKnown RBP15.66■□□□□ 0.1
TRAPPC9-208ENST00000520857 MCCP23508 829 aa15.66■□□□□ 0.1
TRAPPC9-208ENST00000520857 ZNF445P59923 1031 aa15.66■□□□□ 0.1
TRAPPC9-208ENST00000520857 TTC22Q5TAA0 569 aa15.66■□□□□ 0.1
TRAPPC9-208ENST00000520857 ANO2Q9NQ90 1003 aa15.66■□□□□ 0.1
TRAPPC9-208ENST00000520857 ZKSCAN5Q9Y2L8 839 aa15.66■□□□□ 0.1
TRAPPC9-208ENST00000520857 NFE2L2Q16236 605 aa15.65■□□□□ 0.1
TRAPPC9-208ENST00000520857 MBIPQ9NS73 344 aa15.65■□□□□ 0.1
TRAPPC9-208ENST00000520857 NOL7Q9UMY1 257 aaKnown RBP15.65■□□□□ 0.1
TRAPPC9-208ENST00000520857 FAM83GA6ND36 823 aa15.65■□□□□ 0.1
TRAPPC9-208ENST00000520857 SDSP20132 328 aa15.65■□□□□ 0.1
TRAPPC9-208ENST00000520857 SIRT2Q8IXJ6 389 aa15.65■□□□□ 0.1
TRAPPC9-208ENST00000520857 IQSEC2Q5JU85 1478 aa15.65■□□□□ 0.1
TRAPPC9-208ENST00000520857 CD109Q6YHK3 1445 aa15.65■□□□□ 0.1
TRAPPC9-208ENST00000520857 A0A1W2PP64 1363 aa15.65■□□□□ 0.1
TRAPPC9-208ENST00000520857 NCOA3Q9Y6Q9 1424 aa15.65■□□□□ 0.1
TRAPPC9-208ENST00000520857 SBNO2Q9Y2G9 1366 aa15.64■□□□□ 0.09
TRAPPC9-208ENST00000520857 C8orf58Q8NAV2 365 aa15.64■□□□□ 0.09
TRAPPC9-208ENST00000520857 USP26Q9BXU7 913 aa15.64■□□□□ 0.09
TRAPPC9-208ENST00000520857 MYOM1P52179 1685 aa15.64■□□□□ 0.09
TRAPPC9-208ENST00000520857 NSD2O96028 1365 aa15.64■□□□□ 0.09
TRAPPC9-208ENST00000520857 ZNF428Q96B54 188 aa15.64■□□□□ 0.09
TRAPPC9-208ENST00000520857 TSPY26PQ9H489 355 aa15.64■□□□□ 0.09
TRAPPC9-208ENST00000520857 TMEM63CQ9P1W3 806 aa15.64■□□□□ 0.09
TRAPPC9-208ENST00000520857 MBD3O95983 291 aa15.63■□□□□ 0.09
TRAPPC9-208ENST00000520857 TSHZ3Q63HK5 1081 aa15.63■□□□□ 0.09
TRAPPC9-208ENST00000520857 LRSAM1Q6UWE0 723 aa15.63■□□□□ 0.09
TRAPPC9-208ENST00000520857 ZNF830Q96NB3 372 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC9-208ENST00000520857 ERC2O15083 957 aa15.63■□□□□ 0.09
TRAPPC9-208ENST00000520857 GPT2Q8TD30 523 aa15.63■□□□□ 0.09
TRAPPC9-208ENST00000520857 EMILIN1Q9Y6C2 1016 aa15.63■□□□□ 0.09
TRAPPC9-208ENST00000520857 CEP152O94986 1710 aa15.62■□□□□ 0.09
TRAPPC9-208ENST00000520857 HMMRO75330 724 aa15.62■□□□□ 0.09
TRAPPC9-208ENST00000520857 NPM1P06748 294 aaKnown RBP eCLIP15.62■□□□□ 0.09
TRAPPC9-208ENST00000520857 LMOD3Q0VAK6 560 aa15.62■□□□□ 0.09
TRAPPC9-208ENST00000520857 UPF3BQ9BZI7 483 aaKnown RBP15.62■□□□□ 0.09
TRAPPC9-208ENST00000520857 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.61■□□□□ 0.09
TRAPPC9-208ENST00000520857 CDK19Q9BWU1 502 aa15.61■□□□□ 0.09
TRAPPC9-208ENST00000520857 KRT24Q2M2I5 525 aa15.61■□□□□ 0.09
TRAPPC9-208ENST00000520857 SASS6Q6UVJ0 657 aa15.61■□□□□ 0.09
TRAPPC9-208ENST00000520857 AK9Q5TCS8 1911 aa15.6■□□□□ 0.09
TRAPPC9-208ENST00000520857 ZHX1Q9UKY1 873 aaPredicted RBP15.6■□□□□ 0.09
TRAPPC9-208ENST00000520857 NSFL1CQ9UNZ2 370 aaKnown RBP15.6■□□□□ 0.09
TRAPPC9-208ENST00000520857 SPHKAPQ2M3C7 1700 aa15.6■□□□□ 0.09
TRAPPC9-208ENST00000520857 HS1BP3Q53T59 392 aa15.6■□□□□ 0.09
TRAPPC9-208ENST00000520857 ARHGAP45Q92619 1136 aa15.6■□□□□ 0.09
TRAPPC9-208ENST00000520857 TSC1Q92574 1164 aa15.59■□□□□ 0.09
TRAPPC9-208ENST00000520857 PHF14O94880 888 aa15.59■□□□□ 0.09
TRAPPC9-208ENST00000520857 RRS1Q15050 365 aaKnown RBP15.59■□□□□ 0.09
TRAPPC9-208ENST00000520857 TMX3Q96JJ7 454 aa15.59■□□□□ 0.09
TRAPPC9-208ENST00000520857 DCTPP1Q9H773 170 aa15.59■□□□□ 0.09
TRAPPC9-208ENST00000520857 NCBP3Q53F19 620 aaKnown RBP15.59■□□□□ 0.09
TRAPPC9-208ENST00000520857 IFT57Q9NWB7 429 aa15.59■□□□□ 0.09
TRAPPC9-208ENST00000520857 USP25Q9UHP3 1055 aa15.59■□□□□ 0.09
TRAPPC9-208ENST00000520857 EXOC6BQ9Y2D4 811 aa15.59■□□□□ 0.09
TRAPPC9-208ENST00000520857 ABCA6Q8N139 1617 aa15.58■□□□□ 0.08
TRAPPC9-208ENST00000520857 FAM177BA6PVY3 158 aa15.58■□□□□ 0.08
TRAPPC9-208ENST00000520857 DYNC1I1O14576 645 aa15.58■□□□□ 0.08
TRAPPC9-208ENST00000520857 MTERF4Q7Z6M4 381 aaKnown RBP15.58■□□□□ 0.08
TRAPPC9-208ENST00000520857 MAP3K4Q9Y6R4 1608 aa15.58■□□□□ 0.08
TRAPPC9-208ENST00000520857 MEIS3Q99687 375 aa15.57■□□□□ 0.08
TRAPPC9-208ENST00000520857 FANCAO15360 1455 aa15.57■□□□□ 0.08
TRAPPC9-208ENST00000520857 ZNF500O60304 480 aaPredicted RBP15.57■□□□□ 0.08
TRAPPC9-208ENST00000520857 ADGRL1O94910 1474 aa15.57■□□□□ 0.08
TRAPPC9-208ENST00000520857 NECTIN2Q92692 538 aa15.57■□□□□ 0.08
TRAPPC9-208ENST00000520857 POLKQ9UBT6 870 aa15.57■□□□□ 0.08
TRAPPC9-208ENST00000520857 RPGRIP1LQ68CZ1 1315 aa15.56■□□□□ 0.08
TRAPPC9-208ENST00000520857 HAP1P54257 671 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC9-208ENST00000520857 CHAF1AQ13111 956 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC9-208ENST00000520857 RPAP2Q8IXW5 612 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC9-208ENST00000520857 MYOM2P54296 1465 aa15.56■□□□□ 0.08
TRAPPC9-208ENST00000520857 IBTKQ9P2D0 1353 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC9-208ENST00000520857 CHMP3Q9Y3E7 222 aa15.56■□□□□ 0.08
TRAPPC9-208ENST00000520857 SLC4A2P04920 1241 aa15.56■□□□□ 0.08
TRAPPC9-208ENST00000520857 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.56■□□□□ 0.08
TRAPPC9-208ENST00000520857 C17orf53Q8N3J3 647 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC9-208ENST00000520857 TTC12Q9H892 705 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC9-208ENST00000520857 ANKRD44Q8N8A2 993 aa15.55■□□□□ 0.08
TRAPPC9-208ENST00000520857 MIS18AQ9NYP9 233 aa15.55■□□□□ 0.08
TRAPPC9-208ENST00000520857 ABCC1P33527 1531 aa15.55■□□□□ 0.08
TRAPPC9-208ENST00000520857 A0A0U1RQG5 324 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC9-208ENST00000520857 F6X3S4 739 aa15.55■□□□□ 0.08
TRAPPC9-208ENST00000520857 CBX1P83916 185 aa15.55■□□□□ 0.08
TRAPPC9-208ENST00000520857 LARP6Q9BRS8 491 aaKnown RBP15.55■□□□□ 0.08
TRAPPC9-208ENST00000520857 BCL11BQ9C0K0 894 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC9-208ENST00000520857 FIBPO43427 364 aa15.54■□□□□ 0.08
TRAPPC9-208ENST00000520857 MCM5P33992 734 aa15.54■□□□□ 0.08
TRAPPC9-208ENST00000520857 IDI1Q13907 227 aa15.54■□□□□ 0.08
TRAPPC9-208ENST00000520857 NUTM2FA1L443 756 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms