RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 POLR3GLQ9BT43 218 aa22.46■■□□□ 1.19
TNPO1-212ENST00000520850 NSD3Q9BZ95 1437 aa22.46■■□□□ 1.19
TNPO1-212ENST00000520850 STRN4Q9NRL3 753 aa22.45■■□□□ 1.18
TNPO1-212ENST00000520850 GGNBP2Q9H3C7 697 aa22.44■■□□□ 1.18
TNPO1-212ENST00000520850 WDR17Q8IZU2 1322 aa22.43■■□□□ 1.18
TNPO1-212ENST00000520850 LARP1Q6PKG0 1096 aaKnown RBP22.43■■□□□ 1.18
TNPO1-212ENST00000520850 SEPT12Q8IYM1 358 aa22.43■■□□□ 1.18
TNPO1-212ENST00000520850 CRB1P82279 1406 aa22.42■■□□□ 1.18
TNPO1-212ENST00000520850 SOX12O15370 315 aa22.42■■□□□ 1.18
TNPO1-212ENST00000520850 IP6K1Q92551 441 aa22.42■■□□□ 1.18
TNPO1-212ENST00000520850 KIF24Q5T7B8 1368 aa22.41■■□□□ 1.18
TNPO1-212ENST00000520850 ZEB1P37275 1124 aaPredicted RBP22.41■■□□□ 1.18
TNPO1-212ENST00000520850 TCP11L2Q8N4U5 519 aa22.41■■□□□ 1.18
TNPO1-212ENST00000520850 KIF20BQ96Q89 1820 aa22.41■■□□□ 1.18
TNPO1-212ENST00000520850 BLMP54132 1417 aaPredicted RBP22.4■■□□□ 1.18
TNPO1-212ENST00000520850 NSD2O96028 1365 aa22.4■■□□□ 1.18
TNPO1-212ENST00000520850 CCDC7Q96M83 1385 aa22.4■■□□□ 1.18
TNPO1-212ENST00000520850 ZBTB7CA1YPR0 619 aa22.39■■□□□ 1.17
TNPO1-212ENST00000520850 FAM98CQ17RN3 349 aaKnown RBP22.39■■□□□ 1.17
TNPO1-212ENST00000520850 CARD10Q9BWT7 1032 aa22.39■■□□□ 1.17
TNPO1-212ENST00000520850 LTN1O94822 1766 aa22.38■■□□□ 1.17
TNPO1-212ENST00000520850 MAP3K19Q56UN5 1328 aa22.38■■□□□ 1.17
TNPO1-212ENST00000520850 WASHC2AQ641Q2 1341 aa22.38■■□□□ 1.17
TNPO1-212ENST00000520850 ERBB3P21860 1342 aa22.37■■□□□ 1.17
TNPO1-212ENST00000520850 PER1O15534 1290 aaPredicted RBP22.37■■□□□ 1.17
TNPO1-212ENST00000520850 TOM1L2Q6ZVM7 507 aa22.37■■□□□ 1.17
TNPO1-212ENST00000520850 CDCA7Q9BWT1 371 aaPredicted RBP22.37■■□□□ 1.17
TNPO1-212ENST00000520850 KNSTRNQ9Y448 316 aa22.37■■□□□ 1.17
TNPO1-212ENST00000520850 RTL1A6NKG5 1358 aa22.37■■□□□ 1.17
TNPO1-212ENST00000520850 THSD7AQ9UPZ6 1657 aa22.36■■□□□ 1.17
TNPO1-212ENST00000520850 RGPD5Q99666 1765 aa22.35■■□□□ 1.17
TNPO1-212ENST00000520850 KRT27Q7Z3Y8 459 aa22.35■■□□□ 1.17
TNPO1-212ENST00000520850 UPF1Q92900 1129 aaKnown RBP eCLIP22.35■■□□□ 1.17
TNPO1-212ENST00000520850 HOXC9P31274 260 aa22.34■■□□□ 1.17
TNPO1-212ENST00000520850 AMPHP49418 695 aa22.34■■□□□ 1.17
TNPO1-212ENST00000520850 CCDC125Q86Z20 511 aa22.34■■□□□ 1.17
TNPO1-212ENST00000520850 USP35Q9P2H5 1018 aa22.33■■□□□ 1.17
TNPO1-212ENST00000520850 CSB-PGBD3P0DP91 1061 aa22.32■■□□□ 1.16
TNPO1-212ENST00000520850 FBLN1P23142 703 aa22.32■■□□□ 1.16
TNPO1-212ENST00000520850 ANKRD24Q8TF21 1146 aa22.32■■□□□ 1.16
TNPO1-212ENST00000520850 BRWD3Q6RI45 1802 aa22.31■■□□□ 1.16
TNPO1-212ENST00000520850 RRS1Q15050 365 aaKnown RBP22.31■■□□□ 1.16
TNPO1-212ENST00000520850 AMER1Q5JTC6 1135 aaPredicted RBP22.31■■□□□ 1.16
TNPO1-212ENST00000520850 ANKRD26Q9UPS8 1709 aa22.31■■□□□ 1.16
TNPO1-212ENST00000520850 NPC1L1Q9UHC9 1359 aa22.3■■□□□ 1.16
TNPO1-212ENST00000520850 INSRP06213 1382 aa22.29■■□□□ 1.16
TNPO1-212ENST00000520850 FLT4P35916 1363 aa22.29■■□□□ 1.16
TNPO1-212ENST00000520850 A0A0G2JS52 829 aa22.28■■□□□ 1.16
TNPO1-212ENST00000520850 MYT1Q01538 1121 aa22.28■■□□□ 1.16
TNPO1-212ENST00000520850 EP400Q96L91 3159 aa22.27■■□□□ 1.16
TNPO1-212ENST00000520850 POLKQ9UBT6 870 aa22.27■■□□□ 1.16
TNPO1-212ENST00000520850 PARP4Q9UKK3 1724 aaKnown RBP22.27■■□□□ 1.16
TNPO1-212ENST00000520850 FAM208AQ9UK61 1670 aaKnown RBP22.26■■□□□ 1.15
TNPO1-212ENST00000520850 DISP2A7MBM2 1401 aa22.26■■□□□ 1.15
TNPO1-212ENST00000520850 NLRP2Q9NX02 1062 aa22.26■■□□□ 1.15
TNPO1-212ENST00000520850 PDE3BQ13370 1112 aa22.25■■□□□ 1.15
TNPO1-212ENST00000520850 MORC1Q86VD1 984 aa22.25■■□□□ 1.15
TNPO1-212ENST00000520850 MAP2P11137 1827 aaKnown RBP22.24■■□□□ 1.15
TNPO1-212ENST00000520850 HSP90AB2PQ58FF8 381 aa22.24■■□□□ 1.15
TNPO1-212ENST00000520850 FAM196AQ6ZSG2 479 aa22.24■■□□□ 1.15
TNPO1-212ENST00000520850 DDB1Q16531 1140 aa22.23■■□□□ 1.15
TNPO1-212ENST00000520850 EMILIN1Q9Y6C2 1016 aa22.23■■□□□ 1.15
TNPO1-212ENST00000520850 SMG6Q86US8 1419 aaKnown RBP22.22■■□□□ 1.15
TNPO1-212ENST00000520850 PEAK1Q9H792 1746 aa22.21■■□□□ 1.15
TNPO1-212ENST00000520850 EXOC5O00471 708 aa22.21■■□□□ 1.15
TNPO1-212ENST00000520850 IL2RBP14784 551 aa22.21■■□□□ 1.15
TNPO1-212ENST00000520850 BCL9O00512 1426 aa22.2■■□□□ 1.14
TNPO1-212ENST00000520850 WNK3Q9BYP7 1800 aa22.2■■□□□ 1.14
TNPO1-212ENST00000520850 LTV1Q96GA3 475 aaPredicted RBP22.19■■□□□ 1.14
TNPO1-212ENST00000520850 NBPF6Q5VWK0 638 aa22.18■■□□□ 1.14
TNPO1-212ENST00000520850 NBPF4Q96M43 638 aa22.18■■□□□ 1.14
TNPO1-212ENST00000520850 PPM1GO15355 546 aaPredicted RBP22.16■■□□□ 1.14
TNPO1-212ENST00000520850 TNNT2P45379 298 aaPredicted RBP22.16■■□□□ 1.14
TNPO1-212ENST00000520850 LRRC37A3O60309 1634 aa22.15■■□□□ 1.14
TNPO1-212ENST00000520850 NCAPD2Q15021 1401 aa22.14■■□□□ 1.14
TNPO1-212ENST00000520850 OVOS2A0A0G2JMS6 1433 aa22.14■■□□□ 1.13
TNPO1-212ENST00000520850 TNS2Q63HR2 1409 aa22.14■■□□□ 1.13
TNPO1-212ENST00000520850 SF3B2Q13435 895 aaKnown RBP22.13■■□□□ 1.13
TNPO1-212ENST00000520850 MARCH10Q8NA82 808 aaPredicted RBP22.13■■□□□ 1.13
TNPO1-212ENST00000520850 PLEKHG2Q9H7P9 1386 aa22.12■■□□□ 1.13
TNPO1-212ENST00000520850 CC2D1BQ5T0F9 858 aaKnown RBP22.12■■□□□ 1.13
TNPO1-212ENST00000520850 FAM182BQ5T319 152 aa22.12■■□□□ 1.13
TNPO1-212ENST00000520850 RGPD2P0DJD1 1756 aa22.1■■□□□ 1.13
TNPO1-212ENST00000520850 EIF4A2Q14240 407 aaKnown RBP22.1■■□□□ 1.13
TNPO1-212ENST00000520850 EYA1Q99502 592 aa22.1■■□□□ 1.13
TNPO1-212ENST00000520850 RAPGEF4Q8WZA2 1011 aa22.09■■□□□ 1.13
TNPO1-212ENST00000520850 MTHFSP49914 203 aa22.08■■□□□ 1.13
TNPO1-212ENST00000520850 ZCRB1Q8TBF4 217 aaKnown RBP22.08■■□□□ 1.13
TNPO1-212ENST00000520850 RGPD1P0DJD0 1748 aa22.08■■□□□ 1.12
TNPO1-212ENST00000520850 TATP17735 454 aaPredicted RBP22.07■■□□□ 1.12
TNPO1-212ENST00000520850 BAG6P46379 1132 aa22.07■■□□□ 1.12
TNPO1-212ENST00000520850 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.07■■□□□ 1.122e-7■■□□□ 14.4
TNPO1-212ENST00000520850 IGSF1Q8N6C5 1336 aa22.06■■□□□ 1.12
TNPO1-212ENST00000520850 TRIM37O94972 964 aa22.06■■□□□ 1.12
TNPO1-212ENST00000520850 BCL11BQ9C0K0 894 aaPredicted RBP22.06■■□□□ 1.12
TNPO1-212ENST00000520850 MEGF6O75095 1541 aa22.05■■□□□ 1.12
TNPO1-212ENST00000520850 IL13P35225 146 aa22.04■■□□□ 1.12
TNPO1-212ENST00000520850 USHBP1Q8N6Y0 703 aa22.03■■□□□ 1.12
TNPO1-212ENST00000520850 SBF2Q86WG5 1849 aa22.03■■□□□ 1.12
TNPO1-212ENST00000520850 PARD3Q8TEW0 1356 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms