RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-223	ENST00000520520	PRDM11	Q9NQV5	511 aa		11.46	□□□□□ -0.57
CTNNA1-223	ENST00000520520	USP35	Q9P2H5	1018 aa		11.46	□□□□□ -0.57
CTNNA1-223	ENST00000520520	COL14A1	Q05707	1796 aa	Known RBP	11.46	□□□□□ -0.58
CTNNA1-223	ENST00000520520	DLC1	Q96QB1	1528 aa		11.45	□□□□□ -0.58
CTNNA1-223	ENST00000520520	WASL	O00401	505 aa	Predicted RBP	11.45	□□□□□ -0.58
CTNNA1-223	ENST00000520520	ONECUT3	O60422	494 aa	Predicted RBP	11.45	□□□□□ -0.58
CTNNA1-223	ENST00000520520	PDE3B	Q13370	1112 aa		11.45	□□□□□ -0.58
CTNNA1-223	ENST00000520520	R3HDM1	Q15032	1099 aa	Known RBP	11.45	□□□□□ -0.58
CTNNA1-223	ENST00000520520	CCDC136	Q96JN2	1154 aa		11.45	□□□□□ -0.58
CTNNA1-223	ENST00000520520	ALS2	Q96Q42	1657 aa		11.45	□□□□□ -0.58
CTNNA1-223	ENST00000520520	ADGRB1	O14514	1584 aa		11.45	□□□□□ -0.58
CTNNA1-223	ENST00000520520	ADGRB2	O60241	1585 aa		11.45	□□□□□ -0.58
CTNNA1-223	ENST00000520520	TULP4	Q9NRJ4	1543 aa		11.45	□□□□□ -0.58
CTNNA1-223	ENST00000520520	ANP32A	P39687	249 aa	Known RBP	11.44	□□□□□ -0.58
CTNNA1-223	ENST00000520520	ZC3H6	P61129	1189 aa	Known RBP	11.44	□□□□□ -0.58
CTNNA1-223	ENST00000520520	EIF3A	Q14152	1382 aa	Known RBP	11.43	□□□□□ -0.58
CTNNA1-223	ENST00000520520	B4GALNT3	Q6L9W6	998 aa		11.43	□□□□□ -0.58
CTNNA1-223	ENST00000520520	NLRP13	Q86W25	1043 aa		11.43	□□□□□ -0.58
CTNNA1-223	ENST00000520520	PNISR	Q8TF01	805 aa	Known RBP	11.43	□□□□□ -0.58
CTNNA1-223	ENST00000520520	RGPD1	P0DJD0	1748 aa		11.43	□□□□□ -0.58
CTNNA1-223	ENST00000520520	KIAA0232	Q92628	1395 aa		11.42	□□□□□ -0.58
CTNNA1-223	ENST00000520520	SPATA31A5	Q5VU36	1347 aa		11.42	□□□□□ -0.58
CTNNA1-223	ENST00000520520	SPATA31A7	Q8IWB4	1347 aa		11.42	□□□□□ -0.58
CTNNA1-223	ENST00000520520	ZBTB7C	A1YPR0	619 aa		11.42	□□□□□ -0.58
CTNNA1-223	ENST00000520520	TRIM37	O94972	964 aa		11.42	□□□□□ -0.58
CTNNA1-223	ENST00000520520	EZH2	Q15910	746 aa	Known RBP	11.42	□□□□□ -0.58
CTNNA1-223	ENST00000520520	LRP5	O75197	1615 aa		11.42	□□□□□ -0.58
CTNNA1-223	ENST00000520520	PARD3	Q8TEW0	1356 aa		11.41	□□□□□ -0.58
CTNNA1-223	ENST00000520520	NUDT16	Q96DE0	195 aa	Known RBP	11.41	□□□□□ -0.58
CTNNA1-223	ENST00000520520	CRYBG1	Q9Y4K1	1723 aa		11.4	□□□□□ -0.58
CTNNA1-223	ENST00000520520	EVA1C	P58658	441 aa		11.4	□□□□□ -0.58
CTNNA1-223	ENST00000520520	NOP58	Q9Y2X3	529 aa	Known RBP	11.4	□□□□□ -0.58
CTNNA1-223	ENST00000520520	ITSN1	Q15811	1721 aa		11.4	□□□□□ -0.58
CTNNA1-223	ENST00000520520	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.4	□□□□□ -0.58
CTNNA1-223	ENST00000520520	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.39	□□□□□ -0.59
CTNNA1-223	ENST00000520520	APBA3	O96018	575 aa		11.39	□□□□□ -0.59
CTNNA1-223	ENST00000520520	RBM42	Q9BTD8	480 aa	Known RBP	11.39	□□□□□ -0.59
CTNNA1-223	ENST00000520520	CDK19	Q9BWU1	502 aa		11.39	□□□□□ -0.59
CTNNA1-223	ENST00000520520	TNS1	Q9HBL0	1735 aa	Known RBP	11.39	□□□□□ -0.59
CTNNA1-223	ENST00000520520	THSD7A	Q9UPZ6	1657 aa		11.39	□□□□□ -0.59
CTNNA1-223	ENST00000520520	ATP7B	P35670	1465 aa		11.38	□□□□□ -0.59
CTNNA1-223	ENST00000520520	SPATA31A1	Q5TZJ5	1347 aa		11.38	□□□□□ -0.59
CTNNA1-223	ENST00000520520	ST20-MTHFS	A0A0A6YYL1	179 aa		11.38	□□□□□ -0.59
CTNNA1-223	ENST00000520520	RRP1	P56182	461 aa	Known RBP	11.37	□□□□□ -0.59
CTNNA1-223	ENST00000520520	ABTB2	Q8N961	1025 aa		11.37	□□□□□ -0.59
CTNNA1-223	ENST00000520520	ACE	P12821	1306 aa		11.36	□□□□□ -0.59
CTNNA1-223	ENST00000520520	LARP1	Q6PKG0	1096 aa	Known RBP	11.36	□□□□□ -0.59
CTNNA1-223	ENST00000520520	FAM196A	Q6ZSG2	479 aa		11.36	□□□□□ -0.59
CTNNA1-223	ENST00000520520	STAC3	Q96MF2	364 aa		11.36	□□□□□ -0.59
CTNNA1-223	ENST00000520520	TCERG1	O14776	1098 aa	Known RBP	11.35	□□□□□ -0.59
CTNNA1-223	ENST00000520520	SRPK2	P78362	688 aa	Known RBP	11.35	□□□□□ -0.59
CTNNA1-223	ENST00000520520	TMF1	P82094	1093 aa		11.35	□□□□□ -0.59
CTNNA1-223	ENST00000520520	AKT1S1	Q96B36	256 aa		11.35	□□□□□ -0.59
CTNNA1-223	ENST00000520520	SSH2	Q76I76	1423 aa		11.35	□□□□□ -0.59
CTNNA1-223	ENST00000520520	CDCA8	Q53HL2	280 aa		11.34	□□□□□ -0.59
CTNNA1-223	ENST00000520520	CAMKK2	Q96RR4	588 aa		11.34	□□□□□ -0.59
CTNNA1-223	ENST00000520520	BCL11A	Q9H165	835 aa		11.34	□□□□□ -0.59
CTNNA1-223	ENST00000520520	RCAN3	Q9UKA8	241 aa		11.34	□□□□□ -0.59
CTNNA1-223	ENST00000520520	KIAA1210	Q9ULL0	1709 aa		11.34	□□□□□ -0.59
CTNNA1-223	ENST00000520520	NRK	Q7Z2Y5	1582 aa		11.33	□□□□□ -0.6
CTNNA1-223	ENST00000520520	MS4A1	P11836	297 aa		11.33	□□□□□ -0.6
CTNNA1-223	ENST00000520520	RTL5	Q5HYW3	569 aa	Predicted RBP	11.33	□□□□□ -0.6
CTNNA1-223	ENST00000520520	CABP2	Q9NPB3	220 aa		11.33	□□□□□ -0.6
CTNNA1-223	ENST00000520520	CCDC61	Q9Y6R9	512 aa		11.33	□□□□□ -0.6
CTNNA1-223	ENST00000520520	TOPAZ1	Q8N9V7	1692 aa		11.33	□□□□□ -0.6
CTNNA1-223	ENST00000520520	SLC24A1	O60721	1099 aa		11.32	□□□□□ -0.6
CTNNA1-223	ENST00000520520	NBPF1	Q3BBV0	1214 aa		11.32	□□□□□ -0.6
CTNNA1-223	ENST00000520520	TCP11L2	Q8N4U5	519 aa		11.32	□□□□□ -0.6
CTNNA1-223	ENST00000520520	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.32	□□□□□ -0.6
CTNNA1-223	ENST00000520520	CAMTA1	Q9Y6Y1	1673 aa		11.32	□□□□□ -0.6
CTNNA1-223	ENST00000520520	DISP2	A7MBM2	1401 aa		11.32	□□□□□ -0.6
CTNNA1-223	ENST00000520520	PPIP5K1	Q6PFW1	1433 aa		11.32	□□□□□ -0.6
CTNNA1-223	ENST00000520520	SOX12	O15370	315 aa		11.31	□□□□□ -0.6
CTNNA1-223	ENST00000520520	NBPF14	Q5TI25	921 aa		11.31	□□□□□ -0.6
CTNNA1-223	ENST00000520520	IPO9	Q96P70	1041 aa	Known RBP	11.31	□□□□□ -0.6
CTNNA1-223	ENST00000520520	POLR3A	O14802	1390 aa	Predicted RBP	11.3	□□□□□ -0.6
CTNNA1-223	ENST00000520520	NUP188	Q5SRE5	1749 aa		11.3	□□□□□ -0.6
CTNNA1-223	ENST00000520520	BARGIN	Q6ZT62	677 aa		11.3	□□□□□ -0.6
CTNNA1-223	ENST00000520520	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.3	□□□□□ -0.6
CTNNA1-223	ENST00000520520	GC	P02774	474 aa		11.29	□□□□□ -0.6
CTNNA1-223	ENST00000520520	CNGB1	Q14028	1251 aa	Predicted RBP	11.29	□□□□□ -0.6
CTNNA1-223	ENST00000520520	RREB1	Q92766	1687 aa		11.29	□□□□□ -0.6
CTNNA1-223	ENST00000520520	LMO7	Q8WWI1	1683 aa		11.28	□□□□□ -0.6
CTNNA1-223	ENST00000520520	PLEKHG3	A1L390	1219 aa		11.28	□□□□□ -0.6
CTNNA1-223	ENST00000520520	NLRP6	P59044	892 aa		11.28	□□□□□ -0.6
CTNNA1-223	ENST00000520520	TOM1L2	Q6ZVM7	507 aa		11.28	□□□□□ -0.6
CTNNA1-223	ENST00000520520	REM2	Q8IYK8	340 aa	Predicted RBP	11.28	□□□□□ -0.6
CTNNA1-223	ENST00000520520	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.28	□□□□□ -0.6
CTNNA1-223	ENST00000520520	QRICH2	Q9H0J4	1663 aa		11.27	□□□□□ -0.6
CTNNA1-223	ENST00000520520	COL5A2	P05997	1499 aa	Predicted RBP	11.27	□□□□□ -0.6
CTNNA1-223	ENST00000520520	YY1	P25490	414 aa		11.27	□□□□□ -0.61
CTNNA1-223	ENST00000520520	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.27	□□□□□ -0.61
CTNNA1-223	ENST00000520520	DDRGK1	Q96HY6	314 aa		11.27	□□□□□ -0.61
CTNNA1-223	ENST00000520520	CABP1	Q9NZU7	370 aa		11.27	□□□□□ -0.61
CTNNA1-223	ENST00000520520	USP19	O94966	1318 aa		11.27	□□□□□ -0.61
CTNNA1-223	ENST00000520520	CPD	O75976	1380 aa		11.26	□□□□□ -0.61
CTNNA1-223	ENST00000520520	NPC1L1	Q9UHC9	1359 aa		11.26	□□□□□ -0.61
CTNNA1-223	ENST00000520520	CRB1	P82279	1406 aa		11.26	□□□□□ -0.61
CTNNA1-223	ENST00000520520	CSB-PGBD3	P0DP91	1061 aa		11.25	□□□□□ -0.61
CTNNA1-223	ENST00000520520	WDR43	Q15061	677 aa	Known RBP eCLIP	11.25	□□□□□ -0.61

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