RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 DLG5Q8TDM6 1919 aa32.95■■■□□ 2.86
COL13A1-213ENST00000520267 USP6P35125 1406 aa32.95■■■□□ 2.86
COL13A1-213ENST00000520267 ATF7IPQ6VMQ6 1270 aa32.93■■■□□ 2.86
COL13A1-213ENST00000520267 OVOS2A0A0J9YW53 1432 aa32.93■■■□□ 2.86
COL13A1-213ENST00000520267 OVOS2Q6IE36 1432 aa32.93■■■□□ 2.86
COL13A1-213ENST00000520267 THEMISQ8N1K5 641 aaPredicted RBP32.93■■■□□ 2.86
COL13A1-213ENST00000520267 PTCH1Q13635 1447 aa32.9■■■□□ 2.86
COL13A1-213ENST00000520267 ALDH1L2Q3SY69 923 aa32.89■■■□□ 2.86
COL13A1-213ENST00000520267 RWDD1Q9H446 243 aaPredicted RBP32.89■■■□□ 2.86
COL13A1-213ENST00000520267 NALCNQ8IZF0 1738 aa32.89■■■□□ 2.86
COL13A1-213ENST00000520267 VIRMAQ69YN4 1812 aaKnown RBP32.89■■■□□ 2.85
COL13A1-213ENST00000520267 CALD1Q05682 793 aaKnown RBP32.88■■■□□ 2.85
COL13A1-213ENST00000520267 DIP2AQ14689 1571 aa32.87■■■□□ 2.85
COL13A1-213ENST00000520267 RGPD8O14715 1765 aaPredicted RBP32.87■■■□□ 2.85
COL13A1-213ENST00000520267 SSH2Q76I76 1423 aa32.86■■■□□ 2.85
COL13A1-213ENST00000520267 KIF16BQ96L93 1317 aa32.86■■■□□ 2.85
COL13A1-213ENST00000520267 EIF4A2Q14240 407 aaKnown RBP32.86■■■□□ 2.85
COL13A1-213ENST00000520267 ITPRIPQ8IWB1 547 aa32.85■■■□□ 2.85
COL13A1-213ENST00000520267 PEAK1Q9H792 1746 aa32.85■■■□□ 2.85
COL13A1-213ENST00000520267 TRHP20396 242 aaPredicted RBP32.85■■■□□ 2.85
COL13A1-213ENST00000520267 IFT57Q9NWB7 429 aa32.85■■■□□ 2.85
COL13A1-213ENST00000520267 ZNF853P0CG23 659 aa32.84■■■□□ 2.85
COL13A1-213ENST00000520267 DDX19BQ9UMR2 479 aa32.84■■■□□ 2.85
COL13A1-213ENST00000520267 GNAI1P63096 354 aa32.84■■■□□ 2.85
COL13A1-213ENST00000520267 PDZRN3Q9UPQ7 1066 aa32.84■■■□□ 2.85
COL13A1-213ENST00000520267 TMEM57Q8N5G2 664 aa32.83■■■□□ 2.85
COL13A1-213ENST00000520267 IPO8O15397 1037 aaKnown RBP32.82■■■□□ 2.85
COL13A1-213ENST00000520267 DDRGK1Q96HY6 314 aa32.82■■■□□ 2.85
COL13A1-213ENST00000520267 XRN1Q8IZH2 1706 aaKnown RBP32.82■■■□□ 2.85
COL13A1-213ENST00000520267 MBIPQ9NS73 344 aa32.82■■■□□ 2.84
COL13A1-213ENST00000520267 USP31Q70CQ4 1352 aa32.82■■■□□ 2.84
COL13A1-213ENST00000520267 VAMP4O75379 141 aa32.81■■■□□ 2.84
COL13A1-213ENST00000520267 AEBP1Q8IUX7 1158 aa32.81■■■□□ 2.84
COL13A1-213ENST00000520267 LMOD3Q0VAK6 560 aa32.81■■■□□ 2.84
COL13A1-213ENST00000520267 ZNF428Q96B54 188 aa32.81■■■□□ 2.84
COL13A1-213ENST00000520267 FAM83GA6ND36 823 aa32.8■■■□□ 2.84
COL13A1-213ENST00000520267 TSPYL6Q8N831 410 aa32.8■■■□□ 2.84
COL13A1-213ENST00000520267 NBR1Q14596 966 aa32.79■■■□□ 2.84
COL13A1-213ENST00000520267 SULT6B1Q6IMI4 303 aa32.79■■■□□ 2.84
COL13A1-213ENST00000520267 BRPF1P55201 1214 aaPredicted RBP32.78■■■□□ 2.84
COL13A1-213ENST00000520267 HSP90AB2PQ58FF8 381 aa32.78■■■□□ 2.84
COL13A1-213ENST00000520267 SOX12O15370 315 aa32.77■■■□□ 2.84
COL13A1-213ENST00000520267 TTC21AQ8NDW8 1320 aa32.77■■■□□ 2.84
COL13A1-213ENST00000520267 DCTN1Q14203 1278 aa32.76■■■□□ 2.84
COL13A1-213ENST00000520267 CFAP44Q96MT7 982 aa32.76■■■□□ 2.84
COL13A1-213ENST00000520267 RGPD1P0DJD0 1748 aa32.75■■■□□ 2.83
COL13A1-213ENST00000520267 MRPL50Q8N5N7 158 aaKnown RBP32.75■■■□□ 2.83
COL13A1-213ENST00000520267 CEP170BQ9Y4F5 1589 aaPredicted RBP32.75■■■□□ 2.83
COL13A1-213ENST00000520267 NGDNQ8NEJ9 315 aaKnown RBP32.75■■■□□ 2.83
COL13A1-213ENST00000520267 ELL2O00472 640 aaPredicted RBP32.74■■■□□ 2.83
COL13A1-213ENST00000520267 HDAC1Q13547 482 aaPredicted RBP32.74■■■□□ 2.83
COL13A1-213ENST00000520267 ZBTB40Q9NUA8 1239 aa32.74■■■□□ 2.83
COL13A1-213ENST00000520267 RIMS1Q86UR5 1692 aaKnown RBP32.73■■■□□ 2.83
COL13A1-213ENST00000520267 KCNA6P17658 529 aa32.73■■■□□ 2.83
COL13A1-213ENST00000520267 C8orf58Q8NAV2 365 aa32.71■■■□□ 2.83
COL13A1-213ENST00000520267 FMN2Q9NZ56 1722 aa32.7■■■□□ 2.83
COL13A1-213ENST00000520267 MAP3K19Q56UN5 1328 aa32.7■■■□□ 2.83
COL13A1-213ENST00000520267 TWISTNBQ3B726 338 aaPredicted RBP32.7■■■□□ 2.83
COL13A1-213ENST00000520267 PIK3C2AO00443 1686 aa32.69■■■□□ 2.82
COL13A1-213ENST00000520267 SEC24BO95487 1268 aa32.68■■■□□ 2.82
COL13A1-213ENST00000520267 USP19O94966 1318 aa32.67■■■□□ 2.82
COL13A1-213ENST00000520267 ARHGAP45Q92619 1136 aa32.66■■■□□ 2.82
COL13A1-213ENST00000520267 PIK3R4Q99570 1358 aa32.66■■■□□ 2.82
COL13A1-213ENST00000520267 ANKARQ7Z5J8 1434 aa32.65■■■□□ 2.82
COL13A1-213ENST00000520267 SLC4A3P48751 1232 aa32.64■■■□□ 2.82
COL13A1-213ENST00000520267 SBNO1A3KN83 1393 aa32.63■■■□□ 2.81
COL13A1-213ENST00000520267 SMC5Q8IY18 1101 aa32.62■■■□□ 2.81
COL13A1-213ENST00000520267 ARHGEF10O15013 1369 aa32.62■■■□□ 2.81
COL13A1-213ENST00000520267 FLT4P35916 1363 aa32.62■■■□□ 2.81
COL13A1-213ENST00000520267 MCM10Q7L590 875 aa32.61■■■□□ 2.81
COL13A1-213ENST00000520267 ZBTB7BO15156 539 aaPredicted RBP32.6■■■□□ 2.81
COL13A1-213ENST00000520267 MARF1Q9Y4F3 1742 aaKnown RBP32.58■■■□□ 2.81
COL13A1-213ENST00000520267 ABCC4O15439 1325 aa32.58■■■□□ 2.81
COL13A1-213ENST00000520267 NLRP6P59044 892 aa32.57■■■□□ 2.8
COL13A1-213ENST00000520267 CHD2O14647 1828 aaKnown RBP32.57■■■□□ 2.8
COL13A1-213ENST00000520267 CHL1O00533 1208 aa32.57■■■□□ 2.8
COL13A1-213ENST00000520267 AMPHP49418 695 aa32.57■■■□□ 2.8
COL13A1-213ENST00000520267 DAXXQ9UER7 740 aaPredicted RBP32.55■■■□□ 2.8
COL13A1-213ENST00000520267 KRT24Q2M2I5 525 aa32.54■■■□□ 2.8
COL13A1-213ENST00000520267 ANKLE2Q86XL3 938 aa32.54■■■□□ 2.8
COL13A1-213ENST00000520267 NUTM2GQ5VZR2 741 aa32.53■■■□□ 2.8
COL13A1-213ENST00000520267 ZNF142P52746 1687 aaPredicted RBP32.53■■■□□ 2.8
COL13A1-213ENST00000520267 EYA1Q99502 592 aa32.53■■■□□ 2.8
COL13A1-213ENST00000520267 MTHFSDQ2M296 383 aaKnown RBP32.52■■■□□ 2.8
COL13A1-213ENST00000520267 CRB1P82279 1406 aa32.52■■■□□ 2.8
COL13A1-213ENST00000520267 FOXO3O43524 673 aa32.52■■■□□ 2.8
COL13A1-213ENST00000520267 KDRP35968 1356 aa32.52■■■□□ 2.8
COL13A1-213ENST00000520267 API5Q9BZZ5 524 aaKnown RBP32.51■■■□□ 2.8
COL13A1-213ENST00000520267 IGSF1Q8N6C5 1336 aa32.51■■■□□ 2.79
COL13A1-213ENST00000520267 CHMP4BQ9H444 224 aaKnown RBP32.51■■■□□ 2.79
COL13A1-213ENST00000520267 C1orf115Q9H7X2 142 aa32.51■■■□□ 2.79
COL13A1-213ENST00000520267 USP54Q70EL1 1684 aa32.5■■■□□ 2.79
COL13A1-213ENST00000520267 RTL5Q5HYW3 569 aaPredicted RBP32.49■■■□□ 2.79
COL13A1-213ENST00000520267 NUCB1Q02818 461 aa32.48■■■□□ 2.79
COL13A1-213ENST00000520267 RBM33Q96EV2 1170 aaKnown RBP32.48■■■□□ 2.79
COL13A1-213ENST00000520267 KIAA0232Q92628 1395 aa32.47■■■□□ 2.79
COL13A1-213ENST00000520267 ABTB2Q8N961 1025 aa32.47■■■□□ 2.79
COL13A1-213ENST00000520267 HOXC9P31274 260 aa32.46■■■□□ 2.79
COL13A1-213ENST00000520267 ADAMTSL3P82987 1691 aa32.45■■■□□ 2.78
COL13A1-213ENST00000520267 PHF8Q9UPP1 1060 aa32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms