RNA–Protein interactions for RNA: ENST00000519860.3

ERGIC1-206, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 3 BASIC

Gene ERGIC1, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-206ENST00000519860 PSDA5PKW4 1024 aaPredicted RBP32.16■■■□□ 2.74
ERGIC1-206ENST00000519860 TESK2Q96S53 571 aa32.16■■■□□ 2.74
ERGIC1-206ENST00000519860 WDR17Q8IZU2 1322 aa32.16■■■□□ 2.74
ERGIC1-206ENST00000519860 PARP4Q9UKK3 1724 aaKnown RBP32.15■■■□□ 2.74
ERGIC1-206ENST00000519860 DISP2A7MBM2 1401 aa32.15■■■□□ 2.74
ERGIC1-206ENST00000519860 RGPD5Q99666 1765 aa32.14■■■□□ 2.74
ERGIC1-206ENST00000519860 CSB-PGBD3P0DP91 1061 aa32.14■■■□□ 2.74
ERGIC1-206ENST00000519860 EZH2Q15910 746 aaKnown RBP32.14■■■□□ 2.74
ERGIC1-206ENST00000519860 A0A1W2PP64 1363 aa32.13■■■□□ 2.73
ERGIC1-206ENST00000519860 APBA3O96018 575 aa32.13■■■□□ 2.73
ERGIC1-206ENST00000519860 TERF2IPQ9NYB0 399 aa32.13■■■□□ 2.73
ERGIC1-206ENST00000519860 USP31Q70CQ4 1352 aa32.11■■■□□ 2.73
ERGIC1-206ENST00000519860 EDC4Q6P2E9 1401 aaKnown RBP32.1■■■□□ 2.73
ERGIC1-206ENST00000519860 LRRC37A3O60309 1634 aa32.09■■■□□ 2.73
ERGIC1-206ENST00000519860 PUS7Q96PZ0 661 aaKnown RBP32.09■■■□□ 2.73
ERGIC1-206ENST00000519860 DDB1Q16531 1140 aa32.08■■■□□ 2.73
ERGIC1-206ENST00000519860 CAMKK2Q96RR4 588 aa32.08■■■□□ 2.73
ERGIC1-206ENST00000519860 USP54Q70EL1 1684 aa32.06■■■□□ 2.72
ERGIC1-206ENST00000519860 CARD10Q9BWT7 1032 aa32.05■■■□□ 2.72
ERGIC1-206ENST00000519860 WNK3Q9BYP7 1800 aa32.05■■■□□ 2.72
ERGIC1-206ENST00000519860 OVOS2A0A0G2JMS6 1433 aa32.04■■■□□ 2.72
ERGIC1-206ENST00000519860 OVOS2A0A0J9YW53 1432 aa32.04■■■□□ 2.72
ERGIC1-206ENST00000519860 OVOS2Q6IE36 1432 aa32.04■■■□□ 2.72
ERGIC1-206ENST00000519860 R3HDM1Q15032 1099 aaKnown RBP32.04■■■□□ 2.72
ERGIC1-206ENST00000519860 PCGF6Q9BYE7 350 aa32.04■■■□□ 2.72
ERGIC1-206ENST00000519860 USP47Q96K76 1375 aa32.04■■■□□ 2.72
ERGIC1-206ENST00000519860 ABCC6O95255 1503 aa32.02■■■□□ 2.72
ERGIC1-206ENST00000519860 PEAK1Q9H792 1746 aa32.01■■■□□ 2.72
ERGIC1-206ENST00000519860 NINLQ9Y2I6 1382 aa32.01■■■□□ 2.71
ERGIC1-206ENST00000519860 LTN1O94822 1766 aa32.01■■■□□ 2.71
ERGIC1-206ENST00000519860 CDCA7Q9BWT1 371 aaPredicted RBP32■■■□□ 2.71
ERGIC1-206ENST00000519860 SLC24A1O60721 1099 aa31.99■■■□□ 2.71
ERGIC1-206ENST00000519860 PARD3Q8TEW0 1356 aa31.98■■■□□ 2.71
ERGIC1-206ENST00000519860 MARCH10Q8NA82 808 aaPredicted RBP31.97■■■□□ 2.71
ERGIC1-206ENST00000519860 NLRP2Q9NX02 1062 aa31.97■■■□□ 2.71
ERGIC1-206ENST00000519860 ERBB3P21860 1342 aa31.97■■■□□ 2.71
ERGIC1-206ENST00000519860 CCDC7Q96M83 1385 aa31.96■■■□□ 2.71
ERGIC1-206ENST00000519860 C11orf95C9JLR9 678 aaPredicted RBP31.96■■■□□ 2.71
ERGIC1-206ENST00000519860 TMF1P82094 1093 aa31.96■■■□□ 2.71
ERGIC1-206ENST00000519860 RREB1Q92766 1687 aa31.94■■■□□ 2.7
ERGIC1-206ENST00000519860 LRP5O75197 1615 aa31.93■■■□□ 2.7
ERGIC1-206ENST00000519860 PTF1AQ7RTS3 328 aa31.93■■■□□ 2.7
ERGIC1-206ENST00000519860 ANKRD24Q8TF21 1146 aa31.93■■■□□ 2.7
ERGIC1-206ENST00000519860 SBF2Q86WG5 1849 aa31.92■■■□□ 2.7
ERGIC1-206ENST00000519860 EXOC5O00471 708 aa31.92■■■□□ 2.7
ERGIC1-206ENST00000519860 NUP188Q5SRE5 1749 aa31.92■■■□□ 2.7
ERGIC1-206ENST00000519860 COG3Q96JB2 828 aa31.91■■■□□ 2.7
ERGIC1-206ENST00000519860 ANKRD36BQ8N2N9 1353 aa31.91■■■□□ 2.7
ERGIC1-206ENST00000519860 FBLN1P23142 703 aa31.88■■■□□ 2.69
ERGIC1-206ENST00000519860 TNS2Q63HR2 1409 aa31.88■■■□□ 2.69
ERGIC1-206ENST00000519860 LTV1Q96GA3 475 aaPredicted RBP31.87■■■□□ 2.69
ERGIC1-206ENST00000519860 BCL11BQ9C0K0 894 aaPredicted RBP31.87■■■□□ 2.69
ERGIC1-206ENST00000519860 IP6K1Q92551 441 aa31.86■■■□□ 2.69
ERGIC1-206ENST00000519860 TIMELESSQ9UNS1 1208 aa31.86■■■□□ 2.69
ERGIC1-206ENST00000519860 CLSPNQ9HAW4 1339 aa31.85■■■□□ 2.69
ERGIC1-206ENST00000519860 NBPF14Q5TI25 921 aa31.85■■■□□ 2.69
ERGIC1-206ENST00000519860 MAP3K19Q56UN5 1328 aa31.84■■■□□ 2.69
ERGIC1-206ENST00000519860 IL2RBP14784 551 aa31.84■■■□□ 2.69
ERGIC1-206ENST00000519860 BCL9O00512 1426 aa31.83■■■□□ 2.69
ERGIC1-206ENST00000519860 GGNBP2Q9H3C7 697 aa31.83■■■□□ 2.69
ERGIC1-206ENST00000519860 PLSCR1O15162 318 aa31.81■■■□□ 2.68
ERGIC1-206ENST00000519860 CDCA8Q53HL2 280 aa31.81■■■□□ 2.68
ERGIC1-206ENST00000519860 FYB1O15117 783 aa31.8■■■□□ 2.68
ERGIC1-206ENST00000519860 AMPHP49418 695 aa31.8■■■□□ 2.68
ERGIC1-206ENST00000519860 HOXC9P31274 260 aa31.79■■■□□ 2.68
ERGIC1-206ENST00000519860 RGPD3A6NKT7 1758 aaPredicted RBP31.78■■■□□ 2.68
ERGIC1-206ENST00000519860 RGPD4Q7Z3J3 1758 aa31.78■■■□□ 2.68
ERGIC1-206ENST00000519860 KCNQ2O43526 872 aa31.77■■■□□ 2.68
ERGIC1-206ENST00000519860 RRS1Q15050 365 aaKnown RBP31.77■■■□□ 2.68
ERGIC1-206ENST00000519860 ACSBG1Q96GR2 724 aa31.77■■■□□ 2.68
ERGIC1-206ENST00000519860 PROM2Q8N271 834 aa31.74■■■□□ 2.67
ERGIC1-206ENST00000519860 MYOM1P52179 1685 aa31.73■■■□□ 2.67
ERGIC1-206ENST00000519860 FAM208AQ9UK61 1670 aaKnown RBP31.73■■■□□ 2.67
ERGIC1-206ENST00000519860 CCER1Q8TC90 406 aaPredicted RBP31.72■■■□□ 2.67
ERGIC1-206ENST00000519860 ANO8Q9HCE9 1232 aaPredicted RBP31.72■■■□□ 2.67
ERGIC1-206ENST00000519860 CARD14Q9BXL6 1004 aa31.71■■■□□ 2.67
ERGIC1-206ENST00000519860 KIF20BQ96Q89 1820 aa31.7■■■□□ 2.67
ERGIC1-206ENST00000519860 NHSQ6T4R5 1651 aa31.7■■■□□ 2.66
ERGIC1-206ENST00000519860 DDX54Q8TDD1 881 aaKnown RBP31.69■■■□□ 2.66
ERGIC1-206ENST00000519860 NSD3Q9BZ95 1437 aa31.68■■■□□ 2.66
ERGIC1-206ENST00000519860 TXNRD1Q16881 649 aa31.68■■■□□ 2.66
ERGIC1-206ENST00000519860 RGPD2P0DJD1 1756 aa31.68■■■□□ 2.66
ERGIC1-206ENST00000519860 RTL1A6NKG5 1358 aa31.68■■■□□ 2.66
ERGIC1-206ENST00000519860 POLR3GLQ9BT43 218 aa31.67■■■□□ 2.66
ERGIC1-206ENST00000519860 USHBP1Q8N6Y0 703 aa31.63■■■□□ 2.65
ERGIC1-206ENST00000519860 NBPF6Q5VWK0 638 aa31.62■■■□□ 2.65
ERGIC1-206ENST00000519860 NBPF4Q96M43 638 aa31.62■■■□□ 2.65
ERGIC1-206ENST00000519860 MEGF6O75095 1541 aa31.61■■■□□ 2.65
ERGIC1-206ENST00000519860 PDGFDQ9GZP0 370 aaPredicted RBP31.61■■■□□ 2.65
ERGIC1-206ENST00000519860 KAT6BQ8WYB5 2073 aa31.6■■■□□ 2.65
ERGIC1-206ENST00000519860 HSP90AB2PQ58FF8 381 aa31.6■■■□□ 2.65
ERGIC1-206ENST00000519860 SPON1Q9HCB6 807 aa31.6■■■□□ 2.65
ERGIC1-206ENST00000519860 BTAF1O14981 1849 aa31.6■■■□□ 2.65
ERGIC1-206ENST00000519860 SMG6Q86US8 1419 aaKnown RBP31.59■■■□□ 2.65
ERGIC1-206ENST00000519860 STK32BQ9NY57 414 aa31.58■■■□□ 2.65
ERGIC1-206ENST00000519860 HSPA5P11021 654 aaKnown RBP31.57■■■□□ 2.64
ERGIC1-206ENST00000519860 EIF4G2P78344 907 aaKnown RBP eCLIP31.57■■■□□ 2.64
ERGIC1-206ENST00000519860 EMILIN1Q9Y6C2 1016 aa31.57■■■□□ 2.64
ERGIC1-206ENST00000519860 INSRP06213 1382 aa31.56■■■□□ 2.64
ERGIC1-206ENST00000519860 FLT4P35916 1363 aa31.56■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms