RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 EDC4Q6P2E9 1401 aaKnown RBP29.89■■■□□ 2.38
ARFGEF1-206ENST00000519436 NFAT5O94916 1531 aa29.89■■■□□ 2.38
ARFGEF1-206ENST00000519436 FAM196AQ6ZSG2 479 aa29.88■■■□□ 2.37
ARFGEF1-206ENST00000519436 NINLQ9Y2I6 1382 aa29.88■■■□□ 2.37
ARFGEF1-206ENST00000519436 WDR17Q8IZU2 1322 aa29.87■■■□□ 2.37
ARFGEF1-206ENST00000519436 PDE3BQ13370 1112 aa29.86■■■□□ 2.37
ARFGEF1-206ENST00000519436 TOM1L2Q6ZVM7 507 aa29.85■■■□□ 2.37
ARFGEF1-206ENST00000519436 BAG6P46379 1132 aa29.84■■■□□ 2.37
ARFGEF1-206ENST00000519436 TMF1P82094 1093 aa29.83■■■□□ 2.37
ARFGEF1-206ENST00000519436 EN1Q05925 392 aaPredicted RBP29.81■■■□□ 2.36
ARFGEF1-206ENST00000519436 USP54Q70EL1 1684 aa29.81■■■□□ 2.36
ARFGEF1-206ENST00000519436 TRIM37O94972 964 aa29.8■■■□□ 2.36
ARFGEF1-206ENST00000519436 CARD10Q9BWT7 1032 aa29.8■■■□□ 2.36
ARFGEF1-206ENST00000519436 OVOS2A0A0J9YW53 1432 aa29.79■■■□□ 2.36
ARFGEF1-206ENST00000519436 DISP2A7MBM2 1401 aa29.79■■■□□ 2.36
ARFGEF1-206ENST00000519436 OVOS2Q6IE36 1432 aa29.79■■■□□ 2.36
ARFGEF1-206ENST00000519436 SRCAPQ6ZRS2 3230 aa29.79■■■□□ 2.36
ARFGEF1-206ENST00000519436 ABCC6O95255 1503 aa29.76■■■□□ 2.36
ARFGEF1-206ENST00000519436 ANKRD36BQ8N2N9 1353 aa29.76■■■□□ 2.35
ARFGEF1-206ENST00000519436 CSB-PGBD3P0DP91 1061 aa29.75■■■□□ 2.35
ARFGEF1-206ENST00000519436 PARP4Q9UKK3 1724 aaKnown RBP29.74■■■□□ 2.35
ARFGEF1-206ENST00000519436 CAMKK2Q96RR4 588 aa29.74■■■□□ 2.35
ARFGEF1-206ENST00000519436 CDCA7Q9BWT1 371 aaPredicted RBP29.74■■■□□ 2.35
ARFGEF1-206ENST00000519436 DDB1Q16531 1140 aa29.73■■■□□ 2.35
ARFGEF1-206ENST00000519436 RGPD1P0DJD0 1748 aa29.73■■■□□ 2.35
ARFGEF1-206ENST00000519436 CDCA8Q53HL2 280 aa29.72■■■□□ 2.35
ARFGEF1-206ENST00000519436 ERBB3P21860 1342 aa29.71■■■□□ 2.35
ARFGEF1-206ENST00000519436 EZH2Q15910 746 aaKnown RBP29.71■■■□□ 2.35
ARFGEF1-206ENST00000519436 RGPD5Q99666 1765 aa29.71■■■□□ 2.35
ARFGEF1-206ENST00000519436 C11orf95C9JLR9 678 aaPredicted RBP29.7■■■□□ 2.35
ARFGEF1-206ENST00000519436 APBA3O96018 575 aa29.7■■■□□ 2.35
ARFGEF1-206ENST00000519436 CCER1Q8TC90 406 aaPredicted RBP29.7■■■□□ 2.35
ARFGEF1-206ENST00000519436 CCDC7Q96M83 1385 aa29.69■■■□□ 2.34
ARFGEF1-206ENST00000519436 TNS1Q9HBL0 1735 aaKnown RBP29.69■■■□□ 2.34
ARFGEF1-206ENST00000519436 COG3Q96JB2 828 aa29.69■■■□□ 2.34
ARFGEF1-206ENST00000519436 FYB1O15117 783 aa29.68■■■□□ 2.34
ARFGEF1-206ENST00000519436 MARCH10Q8NA82 808 aaPredicted RBP29.68■■■□□ 2.34
ARFGEF1-206ENST00000519436 IP6K1Q92551 441 aa29.68■■■□□ 2.34
ARFGEF1-206ENST00000519436 FBLN1P23142 703 aa29.66■■■□□ 2.34
ARFGEF1-206ENST00000519436 ANKRD24Q8TF21 1146 aa29.66■■■□□ 2.34
ARFGEF1-206ENST00000519436 OVOS2A0A0G2JMS6 1433 aa29.65■■■□□ 2.34
ARFGEF1-206ENST00000519436 LRRC37A3O60309 1634 aa29.64■■■□□ 2.34
ARFGEF1-206ENST00000519436 NLRP2Q9NX02 1062 aa29.64■■■□□ 2.34
ARFGEF1-206ENST00000519436 PEAK1Q9H792 1746 aa29.64■■■□□ 2.34
ARFGEF1-206ENST00000519436 EXOC5O00471 708 aa29.63■■■□□ 2.33
ARFGEF1-206ENST00000519436 CARD14Q9BXL6 1004 aa29.63■■■□□ 2.33
ARFGEF1-206ENST00000519436 MAP3K19Q56UN5 1328 aa29.63■■■□□ 2.33
ARFGEF1-206ENST00000519436 PARD3Q8TEW0 1356 aa29.63■■■□□ 2.33
ARFGEF1-206ENST00000519436 BCL9O00512 1426 aa29.62■■■□□ 2.33
ARFGEF1-206ENST00000519436 GGNBP2Q9H3C7 697 aa29.62■■■□□ 2.33
ARFGEF1-206ENST00000519436 PSDA5PKW4 1024 aaPredicted RBP29.6■■■□□ 2.33
ARFGEF1-206ENST00000519436 LTN1O94822 1766 aa29.59■■■□□ 2.33
ARFGEF1-206ENST00000519436 PTF1AQ7RTS3 328 aa29.59■■■□□ 2.33
ARFGEF1-206ENST00000519436 HOXC9P31274 260 aa29.58■■■□□ 2.33
ARFGEF1-206ENST00000519436 BCL11BQ9C0K0 894 aaPredicted RBP29.57■■■□□ 2.32
ARFGEF1-206ENST00000519436 WNK3Q9BYP7 1800 aa29.57■■■□□ 2.32
ARFGEF1-206ENST00000519436 IL2RBP14784 551 aa29.56■■■□□ 2.32
ARFGEF1-206ENST00000519436 PLSCR1O15162 318 aa29.54■■■□□ 2.32
ARFGEF1-206ENST00000519436 AMPHP49418 695 aa29.54■■■□□ 2.32
ARFGEF1-206ENST00000519436 EIF4G2P78344 907 aaKnown RBP eCLIP29.54■■■□□ 2.32
ARFGEF1-206ENST00000519436 R3HDM1Q15032 1099 aaKnown RBP29.54■■■□□ 2.32
ARFGEF1-206ENST00000519436 RRS1Q15050 365 aaKnown RBP29.54■■■□□ 2.32
ARFGEF1-206ENST00000519436 LTV1Q96GA3 475 aaPredicted RBP29.54■■■□□ 2.32
ARFGEF1-206ENST00000519436 TNS2Q63HR2 1409 aa29.54■■■□□ 2.32
ARFGEF1-206ENST00000519436 HSPA5P11021 654 aaKnown RBP29.53■■■□□ 2.32
ARFGEF1-206ENST00000519436 NSD3Q9BZ95 1437 aa29.49■■■□□ 2.31
ARFGEF1-206ENST00000519436 MYOM1P52179 1685 aa29.49■■■□□ 2.31
ARFGEF1-206ENST00000519436 SBF2Q86WG5 1849 aa29.48■■■□□ 2.31
ARFGEF1-206ENST00000519436 RTL1A6NKG5 1358 aa29.48■■■□□ 2.31
ARFGEF1-206ENST00000519436 PROM2Q8N271 834 aa29.47■■■□□ 2.31
ARFGEF1-206ENST00000519436 KCNQ2O43526 872 aa29.46■■■□□ 2.31
ARFGEF1-206ENST00000519436 RREB1Q92766 1687 aa29.45■■■□□ 2.31
ARFGEF1-206ENST00000519436 HSP90AB2PQ58FF8 381 aa29.43■■■□□ 2.3
ARFGEF1-206ENST00000519436 NBPF14Q5TI25 921 aa29.43■■■□□ 2.3
ARFGEF1-206ENST00000519436 NBPF6Q5VWK0 638 aa29.43■■■□□ 2.3
ARFGEF1-206ENST00000519436 NBPF4Q96M43 638 aa29.43■■■□□ 2.3
ARFGEF1-206ENST00000519436 INSRP06213 1382 aa29.41■■■□□ 2.3
ARFGEF1-206ENST00000519436 KIF24Q5T7B8 1368 aa29.41■■■□□ 2.3
ARFGEF1-206ENST00000519436 NUP188Q5SRE5 1749 aa29.4■■■□□ 2.3
ARFGEF1-206ENST00000519436 POLR3GLQ9BT43 218 aa29.4■■■□□ 2.3
ARFGEF1-206ENST00000519436 ACSBG1Q96GR2 724 aa29.39■■■□□ 2.3
ARFGEF1-206ENST00000519436 CGNL1Q0VF96 1302 aa29.39■■■□□ 2.3
ARFGEF1-206ENST00000519436 EMILIN1Q9Y6C2 1016 aa29.38■■■□□ 2.29
ARFGEF1-206ENST00000519436 LRP5O75197 1615 aa29.38■■■□□ 2.29
ARFGEF1-206ENST00000519436 FLT4P35916 1363 aa29.38■■■□□ 2.29
ARFGEF1-206ENST00000519436 FAM208AQ9UK61 1670 aaKnown RBP29.37■■■□□ 2.29
ARFGEF1-206ENST00000519436 KIF20BQ96Q89 1820 aa29.37■■■□□ 2.29
ARFGEF1-206ENST00000519436 DDX54Q8TDD1 881 aaKnown RBP29.37■■■□□ 2.29
ARFGEF1-206ENST00000519436 RGPD3A6NKT7 1758 aaPredicted RBP29.36■■■□□ 2.29
ARFGEF1-206ENST00000519436 RGPD4Q7Z3J3 1758 aa29.36■■■□□ 2.29
ARFGEF1-206ENST00000519436 TXNRD1Q16881 649 aa29.35■■■□□ 2.29
ARFGEF1-206ENST00000519436 PANK3Q9H999 370 aa29.35■■■□□ 2.29
ARFGEF1-206ENST00000519436 ANO8Q9HCE9 1232 aaPredicted RBP29.35■■■□□ 2.29
ARFGEF1-206ENST00000519436 ZCRB1Q8TBF4 217 aaKnown RBP29.34■■■□□ 2.29
ARFGEF1-206ENST00000519436 MEGF6O75095 1541 aa29.34■■■□□ 2.29
ARFGEF1-206ENST00000519436 USHBP1Q8N6Y0 703 aa29.33■■■□□ 2.29
ARFGEF1-206ENST00000519436 POLKQ9UBT6 870 aa29.31■■■□□ 2.28
ARFGEF1-206ENST00000519436 SMG6Q86US8 1419 aaKnown RBP29.3■■■□□ 2.28
ARFGEF1-206ENST00000519436 WASHC2AQ641Q2 1341 aa29.3■■■□□ 2.28
ARFGEF1-206ENST00000519436 RGPD2P0DJD1 1756 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms