RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 CARD14Q9BXL6 1004 aa10.22□□□□□ -0.77
PCM1-212ENST00000519253 GAS2L2Q8NHY3 880 aa10.22□□□□□ -0.77
PCM1-212ENST00000519253 LRRCC1Q9C099 1032 aa10.22□□□□□ -0.77
PCM1-212ENST00000519253 TSPYL4Q9UJ04 414 aa10.22□□□□□ -0.77
PCM1-212ENST00000519253 DMRT2Q9Y5R5 561 aa10.22□□□□□ -0.77
PCM1-212ENST00000519253 TRIM5Q9C035 493 aa10.22□□□□□ -0.77
PCM1-212ENST00000519253 CCDC183Q5T5S1 534 aa10.22□□□□□ -0.77
PCM1-212ENST00000519253 TTC22Q5TAA0 569 aa10.22□□□□□ -0.77
PCM1-212ENST00000519253 TAF3Q5VWG9 929 aa10.22□□□□□ -0.77
PCM1-212ENST00000519253 ZNF445P59923 1031 aa10.21□□□□□ -0.77
PCM1-212ENST00000519253 CNTROBQ8N137 903 aa10.21□□□□□ -0.77
PCM1-212ENST00000519253 DUOX2Q9NRD8 1548 aa10.21□□□□□ -0.77
PCM1-212ENST00000519253 AMPHP49418 695 aa10.21□□□□□ -0.77
PCM1-212ENST00000519253 TEX35Q5T0J7 233 aa10.21□□□□□ -0.78
PCM1-212ENST00000519253 CHMP3Q9Y3E7 222 aa10.21□□□□□ -0.78
PCM1-212ENST00000519253 ADAMTS12P58397 1594 aa10.21□□□□□ -0.78
PCM1-212ENST00000519253 C14orf93Q9H972 538 aaKnown RBP10.21□□□□□ -0.78
PCM1-212ENST00000519253 ABCC2Q92887 1545 aa10.21□□□□□ -0.78
PCM1-212ENST00000519253 UBTFL1P0CB47 393 aaPredicted RBP10.21□□□□□ -0.78
PCM1-212ENST00000519253 CCDC112Q8NEF3 446 aa10.21□□□□□ -0.78
PCM1-212ENST00000519253 PPP1R9BQ96SB3 815 aa10.21□□□□□ -0.78
PCM1-212ENST00000519253 ANKRD36BQ8N2N9 1353 aa10.2□□□□□ -0.78
PCM1-212ENST00000519253 USP19O94966 1318 aa10.2□□□□□ -0.78
PCM1-212ENST00000519253 SF3A1Q15459 793 aaKnown RBP10.2□□□□□ -0.78
PCM1-212ENST00000519253 TPD52L1Q16890 204 aaPredicted RBP10.2□□□□□ -0.78
PCM1-212ENST00000519253 ARGLU1Q9NWB6 273 aaPredicted RBP10.2□□□□□ -0.78
PCM1-212ENST00000519253 PODXL2Q9NZ53 605 aa10.2□□□□□ -0.78
PCM1-212ENST00000519253 SLC4A2P04920 1241 aa10.2□□□□□ -0.78
PCM1-212ENST00000519253 PSMA5P28066 241 aa10.2□□□□□ -0.78
PCM1-212ENST00000519253 PRAM1Q96QH2 718 aa10.2□□□□□ -0.78
PCM1-212ENST00000519253 IFIT2P09913 472 aaKnown RBP10.2□□□□□ -0.78
PCM1-212ENST00000519253 PRIM1P49642 420 aaKnown RBP10.2□□□□□ -0.78
PCM1-212ENST00000519253 DISP1Q96F81 1524 aa10.2□□□□□ -0.78
PCM1-212ENST00000519253 KRT85P78386 507 aa10.19□□□□□ -0.78
PCM1-212ENST00000519253 MPNDQ8N594 471 aa10.19□□□□□ -0.78
PCM1-212ENST00000519253 ZSCAN31Q96LW9 406 aaPredicted RBP10.19□□□□□ -0.78
PCM1-212ENST00000519253 RBM42Q9BTD8 480 aaKnown RBP10.19□□□□□ -0.78
PCM1-212ENST00000519253 CABP1Q9NZU7 370 aa10.19□□□□□ -0.78
PCM1-212ENST00000519253 CCDC73Q6ZRK6 1079 aa10.19□□□□□ -0.78
PCM1-212ENST00000519253 GPS2Q13227 327 aa10.19□□□□□ -0.78
PCM1-212ENST00000519253 SLC52A1Q9NWF4 448 aa10.19□□□□□ -0.78
PCM1-212ENST00000519253 RBM27Q9P2N5 1060 aaKnown RBP10.19□□□□□ -0.78
PCM1-212ENST00000519253 CCDC30Q5VVM6 783 aa10.18□□□□□ -0.78
PCM1-212ENST00000519253 SPC24Q8NBT2 197 aa10.18□□□□□ -0.78
PCM1-212ENST00000519253 USP25Q9UHP3 1055 aa10.18□□□□□ -0.78
PCM1-212ENST00000519253 GNL2Q13823 731 aaKnown RBP10.18□□□□□ -0.78
PCM1-212ENST00000519253 ZNF608Q9ULD9 1512 aaPredicted RBP10.18□□□□□ -0.78
PCM1-212ENST00000519253 SURF6O75683 361 aaKnown RBP10.18□□□□□ -0.78
PCM1-212ENST00000519253 DHX8Q14562 1220 aaKnown RBP10.18□□□□□ -0.78
PCM1-212ENST00000519253 CCDC34Q96HJ3 373 aa10.18□□□□□ -0.78
PCM1-212ENST00000519253 SMAP1Q8IYB5 467 aaPredicted RBP10.17□□□□□ -0.78
PCM1-212ENST00000519253 NAT10Q9H0A0 1025 aaKnown RBP10.17□□□□□ -0.78
PCM1-212ENST00000519253 CDK19Q9BWU1 502 aa10.17□□□□□ -0.78
PCM1-212ENST00000519253 MAGI2Q86UL8 1455 aa10.17□□□□□ -0.78
PCM1-212ENST00000519253 THUMPD2Q9BTF0 503 aaKnown RBP10.17□□□□□ -0.78
PCM1-212ENST00000519253 CYP46A1Q9Y6A2 500 aa10.17□□□□□ -0.78
PCM1-212ENST00000519253 MX1P20591 662 aa10.17□□□□□ -0.78
PCM1-212ENST00000519253 CLASRPQ8N2M8 674 aaKnown RBP10.17□□□□□ -0.78
PCM1-212ENST00000519253 TMX3Q96JJ7 454 aa10.17□□□□□ -0.78
PCM1-212ENST00000519253 ANAPC15P60006 121 aa10.16□□□□□ -0.78
PCM1-212ENST00000519253 NOLC1Q14978 699 aaKnown RBP eCLIP10.16□□□□□ -0.78
PCM1-212ENST00000519253 NUP62CLQ9H1M0 184 aa10.16□□□□□ -0.78
PCM1-212ENST00000519253 TNMDQ9H2S6 317 aa10.16□□□□□ -0.78
PCM1-212ENST00000519253 HOMER1Q86YM7 354 aa10.16□□□□□ -0.78
PCM1-212ENST00000519253 CCDC94Q9BW85 323 aaPredicted RBP10.16□□□□□ -0.78
PCM1-212ENST00000519253 HIP1O00291 1037 aa10.16□□□□□ -0.78
PCM1-212ENST00000519253 ADCY5O95622 1261 aa10.16□□□□□ -0.78
PCM1-212ENST00000519253 CBX1P83916 185 aa10.16□□□□□ -0.78
PCM1-212ENST00000519253 UPF3BQ9BZI7 483 aaKnown RBP10.16□□□□□ -0.78
PCM1-212ENST00000519253 BCORL1Q5H9F3 1711 aa10.16□□□□□ -0.78
PCM1-212ENST00000519253 ADGBQ8N7X0 1667 aa10.16□□□□□ -0.78
PCM1-212ENST00000519253 ZNF500O60304 480 aaPredicted RBP10.16□□□□□ -0.78
PCM1-212ENST00000519253 SDSP20132 328 aa10.16□□□□□ -0.78
PCM1-212ENST00000519253 DCTPP1Q9H773 170 aa10.16□□□□□ -0.78
PCM1-212ENST00000519253 IBTKQ9P2D0 1353 aaPredicted RBP10.16□□□□□ -0.78
PCM1-212ENST00000519253 A0A0U1RQG5 324 aaPredicted RBP10.16□□□□□ -0.78
PCM1-212ENST00000519253 MAP3K11Q16584 847 aa10.16□□□□□ -0.78
PCM1-212ENST00000519253 ANKRD44Q8N8A2 993 aa10.16□□□□□ -0.78
PCM1-212ENST00000519253 PRDM10Q9NQV6 1147 aa10.16□□□□□ -0.78
PCM1-212ENST00000519253 NOS1P29475 1434 aa10.15□□□□□ -0.78
PCM1-212ENST00000519253 MRPL50Q8N5N7 158 aaKnown RBP10.15□□□□□ -0.78
PCM1-212ENST00000519253 RBSNQ9H1K0 784 aa10.15□□□□□ -0.78
PCM1-212ENST00000519253 C9orf78Q9NZ63 289 aaPredicted RBP10.15□□□□□ -0.78
PCM1-212ENST00000519253 PTPRCP08575 1304 aa10.15□□□□□ -0.78
PCM1-212ENST00000519253 ANKRD1Q15327 319 aa10.15□□□□□ -0.78
PCM1-212ENST00000519253 NGDNQ8NEJ9 315 aaKnown RBP10.15□□□□□ -0.78
PCM1-212ENST00000519253 GAS2L3Q86XJ1 694 aa10.15□□□□□ -0.78
PCM1-212ENST00000519253 GOLGA6L1Q8N7Z2 621 aa10.15□□□□□ -0.78
PCM1-212ENST00000519253 SYCP2Q9BX26 1530 aa10.15□□□□□ -0.78
PCM1-212ENST00000519253 SMARCA5O60264 1052 aaPredicted RBP10.15□□□□□ -0.78
PCM1-212ENST00000519253 MNS1Q8NEH6 495 aa10.15□□□□□ -0.78
PCM1-212ENST00000519253 PPP6R1Q9UPN7 881 aa10.15□□□□□ -0.78
PCM1-212ENST00000519253 UBE2HP62256 183 aa10.15□□□□□ -0.79
PCM1-212ENST00000519253 LARP1BQ659C4 914 aaKnown RBP10.14□□□□□ -0.79
PCM1-212ENST00000519253 SULT6B1Q6IMI4 303 aa10.14□□□□□ -0.79
PCM1-212ENST00000519253 INTS4Q96HW7 963 aaKnown RBP10.14□□□□□ -0.79
PCM1-212ENST00000519253 USP26Q9BXU7 913 aa10.14□□□□□ -0.79
PCM1-212ENST00000519253 WDR7Q9Y4E6 1490 aa10.14□□□□□ -0.79
PCM1-212ENST00000519253 ZBTB7BO15156 539 aaPredicted RBP10.14□□□□□ -0.79
PCM1-212ENST00000519253 G3BP1Q13283 466 aaKnown RBP eCLIP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms