RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 LTBP4Q8N2S1 1624 aa8.2□□□□□ -1.1
SCARNA6.1-201ENST00000516989 NRXN3Q9Y4C0 1643 aa8.2□□□□□ -1.1
SCARNA6.1-201ENST00000516989 ABCC11Q96J66 1382 aa8.2□□□□□ -1.1
SCARNA6.1-201ENST00000516989 YTHDC2Q9H6S0 1430 aaKnown RBP8.2□□□□□ -1.1
SCARNA6.1-201ENST00000516989 DIP2AQ14689 1571 aa8.19□□□□□ -1.1
SCARNA6.1-201ENST00000516989 TBC1D12O60347 775 aa8.19□□□□□ -1.1
SCARNA6.1-201ENST00000516989 HIC1Q14526 733 aa8.19□□□□□ -1.1
SCARNA6.1-201ENST00000516989 IFT172Q9UG01 1749 aa8.19□□□□□ -1.1
SCARNA6.1-201ENST00000516989 ROCK2O75116 1388 aaKnown RBP8.19□□□□□ -1.1
SCARNA6.1-201ENST00000516989 MSH6P52701 1360 aa8.19□□□□□ -1.1
SCARNA6.1-201ENST00000516989 ROBO2Q9HCK4 1378 aa8.19□□□□□ -1.1
SCARNA6.1-201ENST00000516989 LRRC7Q96NW7 1537 aa8.19□□□□□ -1.1
SCARNA6.1-201ENST00000516989 FECHP22830 423 aa8.18□□□□□ -1.1
SCARNA6.1-201ENST00000516989 PIP4K2BP78356 416 aa8.18□□□□□ -1.1
SCARNA6.1-201ENST00000516989 AMHR2Q16671 573 aa8.18□□□□□ -1.1
SCARNA6.1-201ENST00000516989 TMEM92Q6UXU6 159 aa8.18□□□□□ -1.1
SCARNA6.1-201ENST00000516989 DDRGK1Q96HY6 314 aa8.18□□□□□ -1.1
SCARNA6.1-201ENST00000516989 CHD2O14647 1828 aaKnown RBP8.17□□□□□ -1.1
SCARNA6.1-201ENST00000516989 PLEKHG3A1L390 1219 aa8.17□□□□□ -1.1
SCARNA6.1-201ENST00000516989 PARP9Q8IXQ6 854 aa8.17□□□□□ -1.1
SCARNA6.1-201ENST00000516989 HIRIP3Q9BW71 556 aaPredicted RBP8.17□□□□□ -1.1
SCARNA6.1-201ENST00000516989 PLEKHH1Q9ULM0 1364 aa8.17□□□□□ -1.1
SCARNA6.1-201ENST00000516989 STRCP1A6NGW2 1772 aa8.16□□□□□ -1.1
SCARNA6.1-201ENST00000516989 NKTRP30414 1462 aaKnown RBP8.16□□□□□ -1.1
SCARNA6.1-201ENST00000516989 SLAIN2Q9P270 581 aa8.16□□□□□ -1.1
SCARNA6.1-201ENST00000516989 NCOA3Q9Y6Q9 1424 aa8.15□□□□□ -1.1
SCARNA6.1-201ENST00000516989 EVI5O60447 810 aa8.15□□□□□ -1.1
SCARNA6.1-201ENST00000516989 PRIM1P49642 420 aaKnown RBP8.15□□□□□ -1.1
SCARNA6.1-201ENST00000516989 RSPH6AQ9H0K4 717 aa8.15□□□□□ -1.1
SCARNA6.1-201ENST00000516989 NWD1Q149M9 1564 aa8.14□□□□□ -1.11
SCARNA6.1-201ENST00000516989 ASXL1Q8IXJ9 1541 aa8.14□□□□□ -1.11
SCARNA6.1-201ENST00000516989 TECPR2O15040 1411 aa8.14□□□□□ -1.11
SCARNA6.1-201ENST00000516989 PTCH1Q13635 1447 aa8.14□□□□□ -1.11
SCARNA6.1-201ENST00000516989 CENPJQ9HC77 1338 aaPredicted RBP8.14□□□□□ -1.11
SCARNA6.1-201ENST00000516989 ADGRB1O14514 1584 aa8.14□□□□□ -1.11
SCARNA6.1-201ENST00000516989 FAM135BQ49AJ0 1406 aa8.13□□□□□ -1.11
SCARNA6.1-201ENST00000516989 SETD1AO15047 1707 aaKnown RBP8.13□□□□□ -1.11
SCARNA6.1-201ENST00000516989 ST20-MTHFSA0A0A6YYL1 179 aa8.13□□□□□ -1.11
SCARNA6.1-201ENST00000516989 WASLO00401 505 aaPredicted RBP8.13□□□□□ -1.11
SCARNA6.1-201ENST00000516989 PTGDRQ13258 359 aa8.13□□□□□ -1.11
SCARNA6.1-201ENST00000516989 ESCO1Q5FWF5 840 aa8.13□□□□□ -1.11
SCARNA6.1-201ENST00000516989 CDK19Q9BWU1 502 aa8.13□□□□□ -1.11
SCARNA6.1-201ENST00000516989 IQSEC2Q5JU85 1478 aa8.13□□□□□ -1.11
SCARNA6.1-201ENST00000516989 EIF3AQ14152 1382 aaKnown RBP8.12□□□□□ -1.11
SCARNA6.1-201ENST00000516989 GPRASP1Q5JY77 1395 aa8.12□□□□□ -1.11
SCARNA6.1-201ENST00000516989 LAMC1P11047 1609 aa8.12□□□□□ -1.11
SCARNA6.1-201ENST00000516989 SEC24BO95487 1268 aa8.12□□□□□ -1.11
SCARNA6.1-201ENST00000516989 SRPK2P78362 688 aaKnown RBP8.12□□□□□ -1.11
SCARNA6.1-201ENST00000516989 TTLL12Q14166 644 aaPredicted RBP8.12□□□□□ -1.11
SCARNA6.1-201ENST00000516989 XRN1Q8IZH2 1706 aaKnown RBP8.12□□□□□ -1.11
SCARNA6.1-201ENST00000516989 ADGRL3Q9HAR2 1447 aa8.12□□□□□ -1.11
SCARNA6.1-201ENST00000516989 ORAI2Q96SN7 254 aa8.11□□□□□ -1.11
SCARNA6.1-201ENST00000516989 COLQQ9Y215 455 aaPredicted RBP8.11□□□□□ -1.11
SCARNA6.1-201ENST00000516989 KIAA1210Q9ULL0 1709 aa8.11□□□□□ -1.11
SCARNA6.1-201ENST00000516989 RALGAPBQ86X10 1494 aa8.11□□□□□ -1.11
SCARNA6.1-201ENST00000516989 DLC1Q96QB1 1528 aa8.1□□□□□ -1.11
SCARNA6.1-201ENST00000516989 ZEB1P37275 1124 aaPredicted RBP8.1□□□□□ -1.11
SCARNA6.1-201ENST00000516989 EIF4G2P78344 907 aaKnown RBP eCLIP8.1□□□□□ -1.11
SCARNA6.1-201ENST00000516989 PTCD2Q8WV60 388 aaKnown RBP8.1□□□□□ -1.11
SCARNA6.1-201ENST00000516989 NUDT16Q96DE0 195 aaKnown RBP8.1□□□□□ -1.11
SCARNA6.1-201ENST00000516989 TRPM1Q7Z4N2 1603 aa8.1□□□□□ -1.11
SCARNA6.1-201ENST00000516989 USP47Q96K76 1375 aa8.1□□□□□ -1.11
SCARNA6.1-201ENST00000516989 EVC2Q86UK5 1308 aa8.09□□□□□ -1.11
SCARNA6.1-201ENST00000516989 FOXO3O43524 673 aa8.09□□□□□ -1.11
SCARNA6.1-201ENST00000516989 HSPA1LP34931 641 aa8.09□□□□□ -1.11
SCARNA6.1-201ENST00000516989 BRINP3Q76B58 766 aa8.09□□□□□ -1.11
SCARNA6.1-201ENST00000516989 PELP1Q8IZL8 1130 aaKnown RBP8.09□□□□□ -1.11
SCARNA6.1-201ENST00000516989 PMFBP1Q8TBY8 1022 aa8.09□□□□□ -1.11
SCARNA6.1-201ENST00000516989 DDX17Q92841 729 aaKnown RBP8.09□□□□□ -1.11
SCARNA6.1-201ENST00000516989 ANO8Q9HCE9 1232 aaPredicted RBP8.09□□□□□ -1.11
SCARNA6.1-201ENST00000516989 XIRP1Q702N8 1843 aaKnown RBP8.08□□□□□ -1.12
SCARNA6.1-201ENST00000516989 C1orf167Q5SNV9 1468 aa8.08□□□□□ -1.12
SCARNA6.1-201ENST00000516989 HSPA5P11021 654 aaKnown RBP8.08□□□□□ -1.12
SCARNA6.1-201ENST00000516989 TMF1P82094 1093 aa8.08□□□□□ -1.12
SCARNA6.1-201ENST00000516989 GIGYF2Q6Y7W6 1299 aaKnown RBP8.08□□□□□ -1.12
SCARNA6.1-201ENST00000516989 NGDNQ8NEJ9 315 aaKnown RBP8.08□□□□□ -1.12
SCARNA6.1-201ENST00000516989 TMC1Q8TDI8 760 aa8.08□□□□□ -1.12
SCARNA6.1-201ENST00000516989 POLR3GLQ9BT43 218 aa8.08□□□□□ -1.12
SCARNA6.1-201ENST00000516989 GOPCQ9HD26 462 aa8.08□□□□□ -1.12
SCARNA6.1-201ENST00000516989 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.08□□□□□ -1.12
SCARNA6.1-201ENST00000516989 KNDC1Q76NI1 1749 aa8.07□□□□□ -1.12
SCARNA6.1-201ENST00000516989 DCCP43146 1447 aa8.07□□□□□ -1.12
SCARNA6.1-201ENST00000516989 MST1RQ04912 1400 aa8.07□□□□□ -1.12
SCARNA6.1-201ENST00000516989 XPCQ01831 940 aaPredicted RBP8.07□□□□□ -1.12
SCARNA6.1-201ENST00000516989 PSME1Q06323 249 aa8.07□□□□□ -1.12
SCARNA6.1-201ENST00000516989 TESK2Q96S53 571 aa8.07□□□□□ -1.12
SCARNA6.1-201ENST00000516989 PRR36Q9H6K5 1346 aa8.06□□□□□ -1.12
SCARNA6.1-201ENST00000516989 MS4A1P11836 297 aa8.06□□□□□ -1.12
SCARNA6.1-201ENST00000516989 FLIIQ13045 1269 aa8.06□□□□□ -1.12
SCARNA6.1-201ENST00000516989 KRT28Q7Z3Y7 464 aa8.06□□□□□ -1.12
SCARNA6.1-201ENST00000516989 REPIN1Q9BWE0 567 aaKnown RBP8.06□□□□□ -1.12
SCARNA6.1-201ENST00000516989 NPDC1Q9NQX5 325 aaPredicted RBP8.06□□□□□ -1.12
SCARNA6.1-201ENST00000516989 CABP1Q9NZU7 370 aa8.06□□□□□ -1.12
SCARNA6.1-201ENST00000516989 GABBR2O75899 941 aa8.05□□□□□ -1.12
SCARNA6.1-201ENST00000516989 SLC34A2O95436 690 aa8.05□□□□□ -1.12
SCARNA6.1-201ENST00000516989 CDCA8Q53HL2 280 aa8.05□□□□□ -1.12
SCARNA6.1-201ENST00000516989 PCMTD1Q96MG8 357 aaPredicted RBP8.05□□□□□ -1.12
SCARNA6.1-201ENST00000516989 DCBLD2Q96PD2 775 aa8.05□□□□□ -1.12
SCARNA6.1-201ENST00000516989 EPAS1Q99814 870 aa8.05□□□□□ -1.12
SCARNA6.1-201ENST00000516989 CDHR5Q9HBB8 845 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms