RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 CCDC116Q8IYX3 515 aa6.29□□□□□ -1.4
SCARNA16.2-201ENST00000516520 PURBQ96QR8 312 aaKnown RBP6.29□□□□□ -1.4
SCARNA16.2-201ENST00000516520 ZFAND3Q9H8U3 227 aa6.29□□□□□ -1.4
SCARNA16.2-201ENST00000516520 NXF1Q9UBU9 619 aaKnown RBP6.29□□□□□ -1.4
SCARNA16.2-201ENST00000516520 WIPF1O43516 503 aa6.28□□□□□ -1.4
SCARNA16.2-201ENST00000516520 TMEM259Q4ZIN3 620 aa6.28□□□□□ -1.4
SCARNA16.2-201ENST00000516520 MEIOBQ8N635 442 aa6.28□□□□□ -1.4
SCARNA16.2-201ENST00000516520 PGPEP1Q9NXJ5 209 aa6.28□□□□□ -1.4
SCARNA16.2-201ENST00000516520 LINC00528Q8N1L1 170 aa6.27□□□□□ -1.41
SCARNA16.2-201ENST00000516520 BMP2P12643 396 aa6.26□□□□□ -1.41
SCARNA16.2-201ENST00000516520 INSM1Q01101 510 aaPredicted RBP6.26□□□□□ -1.41
SCARNA16.2-201ENST00000516520 DHX9Q08211 1270 aaKnown RBP6.26□□□□□ -1.41
SCARNA16.2-201ENST00000516520 NBPF20Q3BBV1 942 aa6.26□□□□□ -1.41
SCARNA16.2-201ENST00000516520 IRF7Q92985 503 aa6.26□□□□□ -1.41
SCARNA16.2-201ENST00000516520 KCTD15Q96SI1 283 aaPredicted RBP6.26□□□□□ -1.41
SCARNA16.2-201ENST00000516520 C6orf118Q5T5N4 469 aa6.25□□□□□ -1.41
SCARNA16.2-201ENST00000516520 ADAM32Q8TC27 787 aa6.25□□□□□ -1.41
SCARNA16.2-201ENST00000516520 TSEN34Q9BSV6 310 aaKnown RBP6.25□□□□□ -1.41
SCARNA16.2-201ENST00000516520 HMX1Q9NP08 348 aaPredicted RBP6.25□□□□□ -1.41
SCARNA16.2-201ENST00000516520 H3BM21 787 aa6.24□□□□□ -1.41
SCARNA16.2-201ENST00000516520 MAN1A2O60476 641 aa6.24□□□□□ -1.41
SCARNA16.2-201ENST00000516520 BRPF1P55201 1214 aaPredicted RBP6.24□□□□□ -1.41
SCARNA16.2-201ENST00000516520 PPP1R26Q5T8A7 1209 aaPredicted RBP6.24□□□□□ -1.41
SCARNA16.2-201ENST00000516520 IL27Q8NEV9 243 aa6.24□□□□□ -1.41
SCARNA16.2-201ENST00000516520 INTS6LQ5JSJ4 861 aaKnown RBP6.23□□□□□ -1.41
SCARNA16.2-201ENST00000516520 EPS8L1Q8TE68 723 aa6.23□□□□□ -1.41
SCARNA16.2-201ENST00000516520 TRIM52Q96A61 297 aa6.23□□□□□ -1.41
SCARNA16.2-201ENST00000516520 OCSTAMPQ9BR26 566 aa6.23□□□□□ -1.41
SCARNA16.2-201ENST00000516520 Q6ZVU0 165 aa6.22□□□□□ -1.41
SCARNA16.2-201ENST00000516520 DZIP3Q86Y13 1208 aaKnown RBP6.22□□□□□ -1.41
SCARNA16.2-201ENST00000516520 STK17AQ9UEE5 414 aa6.22□□□□□ -1.41
SCARNA16.2-201ENST00000516520 SOCS7O14512 581 aa6.21□□□□□ -1.42
SCARNA16.2-201ENST00000516520 LCE2CQ5TA81 110 aa6.21□□□□□ -1.42
SCARNA16.2-201ENST00000516520 TRIM34Q9BYJ4 488 aa6.21□□□□□ -1.42
SCARNA16.2-201ENST00000516520 SOS2Q07890 1332 aaPredicted RBP6.21□□□□□ -1.42
SCARNA16.2-201ENST00000516520 SOBPA7XYQ1 873 aa6.2□□□□□ -1.42
SCARNA16.2-201ENST00000516520 APBB1O00213 710 aa6.2□□□□□ -1.42
SCARNA16.2-201ENST00000516520 TPRNQ4KMQ1 711 aa6.2□□□□□ -1.42
SCARNA16.2-201ENST00000516520 BANK1Q8NDB2 785 aa6.2□□□□□ -1.42
SCARNA16.2-201ENST00000516520 TTLL8A6PVC2 850 aa6.19□□□□□ -1.42
SCARNA16.2-201ENST00000516520 ZBBXA8MT70 800 aa6.19□□□□□ -1.42
SCARNA16.2-201ENST00000516520 SPINT1O43278 529 aa6.19□□□□□ -1.42
SCARNA16.2-201ENST00000516520 VEGFBP49765 207 aa6.19□□□□□ -1.42
SCARNA16.2-201ENST00000516520 CBLBQ13191 982 aa6.19□□□□□ -1.42
SCARNA16.2-201ENST00000516520 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.19□□□□□ -1.42
SCARNA16.2-201ENST00000516520 SEPT12Q8IYM1 358 aa6.19□□□□□ -1.42
SCARNA16.2-201ENST00000516520 ZNF592Q92610 1267 aa6.19□□□□□ -1.42
SCARNA16.2-201ENST00000516520 VSIG8P0DPA2 414 aa6.18□□□□□ -1.42
SCARNA16.2-201ENST00000516520 GMPRP36959 345 aa6.18□□□□□ -1.42
SCARNA16.2-201ENST00000516520 CCDC125Q86Z20 511 aa6.18□□□□□ -1.42
SCARNA16.2-201ENST00000516520 GJD4Q96KN9 370 aaPredicted RBP6.18□□□□□ -1.42
SCARNA16.2-201ENST00000516520 DNMT3LQ9UJW3 386 aa6.18□□□□□ -1.42
SCARNA16.2-201ENST00000516520 FAM181BA6NEQ2 426 aa6.17□□□□□ -1.42
SCARNA16.2-201ENST00000516520 ESPNB1AK53 854 aa6.17□□□□□ -1.42
SCARNA16.2-201ENST00000516520 RAB15P59190 212 aa6.17□□□□□ -1.42
SCARNA16.2-201ENST00000516520 MCCD1P59942 119 aaPredicted RBP6.17□□□□□ -1.42
SCARNA16.2-201ENST00000516520 ZNF330Q9Y3S2 320 aaPredicted RBP6.17□□□□□ -1.42
SCARNA16.2-201ENST00000516520 ERVH48-1M5A8F1 160 aa6.16□□□□□ -1.42
SCARNA16.2-201ENST00000516520 PPFIA3O75145 1194 aa6.16□□□□□ -1.42
SCARNA16.2-201ENST00000516520 ADH1AP07327 375 aa6.16□□□□□ -1.42
SCARNA16.2-201ENST00000516520 ZNF784Q8NCA9 323 aaPredicted RBP6.16□□□□□ -1.42
SCARNA16.2-201ENST00000516520 PCDHB9Q9Y5E1 797 aa6.16□□□□□ -1.42
SCARNA16.2-201ENST00000516520 ERBB4Q15303 1308 aa6.16□□□□□ -1.42
SCARNA16.2-201ENST00000516520 FBXO45P0C2W1 286 aa6.15□□□□□ -1.42
SCARNA16.2-201ENST00000516520 RELBQ01201 579 aa6.15□□□□□ -1.42
SCARNA16.2-201ENST00000516520 TMPRSS4Q9NRS4 437 aa6.15□□□□□ -1.42
SCARNA16.2-201ENST00000516520 NDUFB9Q9Y6M9 179 aa6.15□□□□□ -1.42
SCARNA16.2-201ENST00000516520 LILRA1O75019 489 aa6.14□□□□□ -1.43
SCARNA16.2-201ENST00000516520 NR1H3Q13133 447 aa6.14□□□□□ -1.43
SCARNA16.2-201ENST00000516520 RNF20Q5VTR2 975 aa6.14□□□□□ -1.43
SCARNA16.2-201ENST00000516520 ZSCAN1Q8NBB4 408 aa6.14□□□□□ -1.43
SCARNA16.2-201ENST00000516520 AGBL1Q96MI9 1066 aa6.14□□□□□ -1.43
SCARNA16.2-201ENST00000516520 POLMQ9NP87 494 aaPredicted RBP6.14□□□□□ -1.43
SCARNA16.2-201ENST00000516520 FIGNL2A6NMB9 653 aa6.13□□□□□ -1.43
SCARNA16.2-201ENST00000516520 PTSQ03393 145 aa6.13□□□□□ -1.43
SCARNA16.2-201ENST00000516520 MTMR14Q8NCE2 650 aa6.13□□□□□ -1.43
SCARNA16.2-201ENST00000516520 INSM2Q96T92 566 aaPredicted RBP6.13□□□□□ -1.43
SCARNA16.2-201ENST00000516520 PTGIRP43119 386 aa6.12□□□□□ -1.43
SCARNA16.2-201ENST00000516520 CTSOP43234 321 aaPredicted RBP6.12□□□□□ -1.43
SCARNA16.2-201ENST00000516520 PRM3Q9NNZ6 103 aa6.12□□□□□ -1.43
SCARNA16.2-201ENST00000516520 GIGYF1O75420 1035 aaPredicted RBP6.11□□□□□ -1.43
SCARNA16.2-201ENST00000516520 CCDC155Q8N6L0 562 aa6.11□□□□□ -1.43
SCARNA16.2-201ENST00000516520 RNF217Q8TC41 542 aa6.11□□□□□ -1.43
SCARNA16.2-201ENST00000516520 ZNF395Q9H8N7 513 aaPredicted RBP6.11□□□□□ -1.43
SCARNA16.2-201ENST00000516520 CYLDQ9NQC7 956 aa6.11□□□□□ -1.43
SCARNA16.2-201ENST00000516520 SLC35F4A4IF30 521 aa6.1□□□□□ -1.43
SCARNA16.2-201ENST00000516520 ADD1P35611 737 aaKnown RBP6.1□□□□□ -1.43
SCARNA16.2-201ENST00000516520 NANOS1Q8WY41 292 aaKnown RBP6.1□□□□□ -1.43
SCARNA16.2-201ENST00000516520 ATP5J2-PTCD1G3V325 749 aa6.09□□□□□ -1.43
SCARNA16.2-201ENST00000516520 CC2D2BQ6DHV5 1058 aa6.09□□□□□ -1.43
SCARNA16.2-201ENST00000516520 CYP2U1Q7Z449 544 aa6.09□□□□□ -1.43
SCARNA16.2-201ENST00000516520 SNRKQ9NRH2 765 aa6.09□□□□□ -1.43
SCARNA16.2-201ENST00000516520 GPR37L1O60883 481 aa6.08□□□□□ -1.44
SCARNA16.2-201ENST00000516520 ITGA6P23229 1130 aa6.08□□□□□ -1.44
SCARNA16.2-201ENST00000516520 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
SCARNA16.2-201ENST00000516520 RNF144AP50876 292 aaPredicted RBP6.08□□□□□ -1.44
SCARNA16.2-201ENST00000516520 ERVK-9P63128 1117 aa6.08□□□□□ -1.44
SCARNA16.2-201ENST00000516520 FOXD4L5Q5VV16 416 aaPredicted RBP6.08□□□□□ -1.44
SCARNA16.2-201ENST00000516520 LYSMD3Q7Z3D4 306 aa6.08□□□□□ -1.44
SCARNA16.2-201ENST00000516520 KDF1Q8NAX2 398 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms