RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 USP46P62068 366 aa4.08□□□□□ -1.76
SNORA40.13-201ENST00000516379 MKL2Q9ULH7 1088 aa4.08□□□□□ -1.76
SNORA40.13-201ENST00000516379 FOXJ1Q92949 421 aa4.07□□□□□ -1.76
SNORA40.13-201ENST00000516379 SUV39H2Q9H5I1 410 aa4.07□□□□□ -1.76
SNORA40.13-201ENST00000516379 YBX3P16989 372 aaKnown RBP eCLIP4.06□□□□□ -1.76
SNORA40.13-201ENST00000516379 RSPO4Q2I0M5 234 aaPredicted RBP4.06□□□□□ -1.76
SNORA40.13-201ENST00000516379 C4orf48Q5BLP8 95 aa4.06□□□□□ -1.76
SNORA40.13-201ENST00000516379 Q6ZVU0 165 aa4.06□□□□□ -1.76
SNORA40.13-201ENST00000516379 KRTAP4-5Q9BYR2 181 aa4.06□□□□□ -1.76
SNORA40.13-201ENST00000516379 SHISA8B8ZZ34 492 aa4.05□□□□□ -1.76
SNORA40.13-201ENST00000516379 HOXB4P17483 251 aaPredicted RBP4.05□□□□□ -1.76
SNORA40.13-201ENST00000516379 CTSOP43234 321 aaPredicted RBP4.05□□□□□ -1.76
SNORA40.13-201ENST00000516379 GRIN2CQ14957 1233 aa4.05□□□□□ -1.76
SNORA40.13-201ENST00000516379 LINC00114Q6XXX2 140 aa4.05□□□□□ -1.76
SNORA40.13-201ENST00000516379 GPR25O00155 361 aa4.04□□□□□ -1.76
SNORA40.13-201ENST00000516379 CBLBQ13191 982 aa4.04□□□□□ -1.76
SNORA40.13-201ENST00000516379 LAMC2Q13753 1193 aa4.04□□□□□ -1.76
SNORA40.13-201ENST00000516379 NKAPLQ5M9Q1 402 aa4.04□□□□□ -1.76
SNORA40.13-201ENST00000516379 ZNF837Q96EG3 531 aaPredicted RBP4.04□□□□□ -1.76
SNORA40.13-201ENST00000516379 EMILIN1Q9Y6C2 1016 aa4.04□□□□□ -1.76
SNORA40.13-201ENST00000516379 GNPATO15228 680 aa4.03□□□□□ -1.76
SNORA40.13-201ENST00000516379 FSHRP23945 695 aa4.03□□□□□ -1.76
SNORA40.13-201ENST00000516379 FZD5Q13467 585 aa4.03□□□□□ -1.76
SNORA40.13-201ENST00000516379 RNF217Q8TC41 542 aa4.03□□□□□ -1.76
SNORA40.13-201ENST00000516379 MCTP1Q6DN14 999 aa4.02□□□□□ -1.77
SNORA40.13-201ENST00000516379 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
SNORA40.13-201ENST00000516379 C1orf229Q6ZS94 237 aaPredicted RBP4.02□□□□□ -1.77
SNORA40.13-201ENST00000516379 ARHGEF1Q92888 912 aaKnown RBP4.02□□□□□ -1.77
SNORA40.13-201ENST00000516379 TRIM22Q8IYM9 498 aa4.01□□□□□ -1.77
SNORA40.13-201ENST00000516379 CCDC116Q8IYX3 515 aa4.01□□□□□ -1.77
SNORA40.13-201ENST00000516379 GMCL1Q96IK5 515 aa4.01□□□□□ -1.77
SNORA40.13-201ENST00000516379 FMNL2Q96PY5 1086 aa4.01□□□□□ -1.77
SNORA40.13-201ENST00000516379 INSM2Q96T92 566 aaPredicted RBP4.01□□□□□ -1.77
SNORA40.13-201ENST00000516379 PCDHGC3Q9UN70 934 aa4.01□□□□□ -1.77
SNORA40.13-201ENST00000516379 MAP4K5Q9Y4K4 846 aa4.01□□□□□ -1.77
SNORA40.13-201ENST00000516379 GPR37O15354 613 aa4□□□□□ -1.77
SNORA40.13-201ENST00000516379 TXKP42681 527 aa4□□□□□ -1.77
SNORA40.13-201ENST00000516379 LRP8Q14114 963 aa4□□□□□ -1.77
SNORA40.13-201ENST00000516379 DBN1Q16643 649 aa4□□□□□ -1.77
SNORA40.13-201ENST00000516379 C1QTNF2Q9BXJ5 285 aa4□□□□□ -1.77
SNORA40.13-201ENST00000516379 OXCT2Q9BYC2 517 aaPredicted RBP4□□□□□ -1.77
SNORA40.13-201ENST00000516379 DYRK3O43781 588 aa3.99□□□□□ -1.77
SNORA40.13-201ENST00000516379 HYAL3O43820 417 aaPredicted RBP3.99□□□□□ -1.77
SNORA40.13-201ENST00000516379 GATA4P43694 442 aa3.99□□□□□ -1.77
SNORA40.13-201ENST00000516379 FOXR1Q6PIV2 292 aa3.99□□□□□ -1.77
SNORA40.13-201ENST00000516379 RRAGCQ9HB90 399 aa3.99□□□□□ -1.77
SNORA40.13-201ENST00000516379 C6orf229H3BNL8 230 aa3.98□□□□□ -1.77
SNORA40.13-201ENST00000516379 GNB5O14775 395 aa3.98□□□□□ -1.77
SNORA40.13-201ENST00000516379 MX2P20592 715 aa3.98□□□□□ -1.77
SNORA40.13-201ENST00000516379 PRSS36Q5K4E3 855 aa3.98□□□□□ -1.77
SNORA40.13-201ENST00000516379 DESI1Q6ICB0 168 aa3.98□□□□□ -1.77
SNORA40.13-201ENST00000516379 AGBL1Q96MI9 1066 aa3.98□□□□□ -1.77
SNORA40.13-201ENST00000516379 PAX4O43316 350 aa3.97□□□□□ -1.77
SNORA40.13-201ENST00000516379 PPP1R26Q5T8A7 1209 aaPredicted RBP3.97□□□□□ -1.77
SNORA40.13-201ENST00000516379 FOXD4L5Q5VV16 416 aaPredicted RBP3.97□□□□□ -1.77
SNORA40.13-201ENST00000516379 VASH1Q7L8A9 365 aaPredicted RBP3.97□□□□□ -1.77
SNORA40.13-201ENST00000516379 GTPBP3Q969Y2 492 aaKnown RBP3.97□□□□□ -1.77
SNORA40.13-201ENST00000516379 POLMQ9NP87 494 aaPredicted RBP3.97□□□□□ -1.77
SNORA40.13-201ENST00000516379 COL17A1Q9UMD9 1497 aaPredicted RBP3.97□□□□□ -1.77
SNORA40.13-201ENST00000516379 BPHLQ86WA6 291 aaPredicted RBP3.96□□□□□ -1.78
SNORA40.13-201ENST00000516379 TRMT44Q8IYL2 757 aaKnown RBP3.96□□□□□ -1.78
SNORA40.13-201ENST00000516379 PRR7Q8TB68 274 aa3.96□□□□□ -1.78
SNORA40.13-201ENST00000516379 TPSG1Q9NRR2 321 aa3.96□□□□□ -1.78
SNORA40.13-201ENST00000516379 PGPEP1Q9NXJ5 209 aa3.96□□□□□ -1.78
SNORA40.13-201ENST00000516379 NSFL1CQ9UNZ2 370 aaKnown RBP3.96□□□□□ -1.78
SNORA40.13-201ENST00000516379 FDX1P10109 184 aa3.95□□□□□ -1.78
SNORA40.13-201ENST00000516379 CTHP32929 405 aa3.95□□□□□ -1.78
SNORA40.13-201ENST00000516379 MAP2K3P46734 347 aa3.95□□□□□ -1.78
SNORA40.13-201ENST00000516379 RELBQ01201 579 aa3.95□□□□□ -1.78
SNORA40.13-201ENST00000516379 AGERQ15109 404 aa3.95□□□□□ -1.78
SNORA40.13-201ENST00000516379 EDARADDQ8WWZ3 215 aa3.95□□□□□ -1.78
SNORA40.13-201ENST00000516379 ZNF395Q9H8N7 513 aaPredicted RBP3.95□□□□□ -1.78
SNORA40.13-201ENST00000516379 PIK3R2O00459 728 aa3.94□□□□□ -1.78
SNORA40.13-201ENST00000516379 F12P00748 615 aaPredicted RBP3.94□□□□□ -1.78
SNORA40.13-201ENST00000516379 PRPF38BQ5VTL8 546 aaKnown RBP3.94□□□□□ -1.78
SNORA40.13-201ENST00000516379 LYPD8Q6UX82 237 aa3.94□□□□□ -1.78
SNORA40.13-201ENST00000516379 LYSMD3Q7Z3D4 306 aa3.94□□□□□ -1.78
SNORA40.13-201ENST00000516379 KLRG1Q96E93 195 aa3.94□□□□□ -1.78
SNORA40.13-201ENST00000516379 MAP10Q9P2G4 905 aa3.94□□□□□ -1.78
SNORA40.13-201ENST00000516379 DGKGP49619 791 aa3.93□□□□□ -1.78
SNORA40.13-201ENST00000516379 RBM26Q5T8P6 1007 aaKnown RBP3.93□□□□□ -1.78
SNORA40.13-201ENST00000516379 KCNV2Q8TDN2 545 aa3.93□□□□□ -1.78
SNORA40.13-201ENST00000516379 TRERF1Q96PN7 1200 aa3.93□□□□□ -1.78
SNORA40.13-201ENST00000516379 NOP53Q9NZM5 478 aaKnown RBP3.93□□□□□ -1.78
SNORA40.13-201ENST00000516379 DCAF8L2P0C7V8 631 aa3.92□□□□□ -1.78
SNORA40.13-201ENST00000516379 LCE4AQ5TA78 99 aa3.92□□□□□ -1.78
SNORA40.13-201ENST00000516379 GIGYF2Q6Y7W6 1299 aaKnown RBP3.92□□□□□ -1.78
SNORA40.13-201ENST00000516379 GDF2Q9UK05 429 aaPredicted RBP3.92□□□□□ -1.78
SNORA40.13-201ENST00000516379 H7C1W4 665 aa3.91□□□□□ -1.78
SNORA40.13-201ENST00000516379 SEMA3EO15041 775 aa3.91□□□□□ -1.78
SNORA40.13-201ENST00000516379 RHOQP17081 205 aa3.91□□□□□ -1.78
SNORA40.13-201ENST00000516379 RIPOR1Q6ZS17 1223 aa3.91□□□□□ -1.78
SNORA40.13-201ENST00000516379 RIC3Q7Z5B4 369 aa3.91□□□□□ -1.78
SNORA40.13-201ENST00000516379 KDF1Q8NAX2 398 aaPredicted RBP3.91□□□□□ -1.78
SNORA40.13-201ENST00000516379 KRTAP9-8Q9BYQ0 159 aa3.91□□□□□ -1.78
SNORA40.13-201ENST00000516379 AMPD1P23109 780 aa3.9□□□□□ -1.79
SNORA40.13-201ENST00000516379 SH3BP5LQ7L8J4 393 aa3.9□□□□□ -1.79
SNORA40.13-201ENST00000516379 PRICKLE2Q7Z3G6 844 aa3.9□□□□□ -1.79
SNORA40.13-201ENST00000516379 GOLGA6L1Q8N7Z2 621 aa3.9□□□□□ -1.79
SNORA40.13-201ENST00000516379 BBXQ8WY36 941 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms