RNA–Protein interactions for RNA: ENST00000515818.5

RPS3A-214, Transcript of ribosomal protein S3A, humanhuman

TSL 5

Gene RPS3A, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-214ENST00000515818 ZIC2O95409 532 aaPredicted RBP10.91□□□□□ -0.66
RPS3A-214ENST00000515818 KCTD15Q96SI1 283 aaPredicted RBP10.91□□□□□ -0.66
RPS3A-214ENST00000515818 CDV3Q9UKY7 258 aaKnown RBP10.9□□□□□ -0.66
RPS3A-214ENST00000515818 CCDC116Q8IYX3 515 aa10.89□□□□□ -0.67
RPS3A-214ENST00000515818 TBC1D2BQ9UPU7 963 aa10.89□□□□□ -0.67
RPS3A-214ENST00000515818 INTS6LQ5JSJ4 861 aaKnown RBP10.88□□□□□ -0.67
RPS3A-214ENST00000515818 DZIP3Q86Y13 1208 aaKnown RBP10.88□□□□□ -0.67
RPS3A-214ENST00000515818 C11orf95C9JLR9 678 aaPredicted RBP10.87□□□□□ -0.67
RPS3A-214ENST00000515818 APBB1O00213 710 aa10.87□□□□□ -0.67
RPS3A-214ENST00000515818 SNRPBP14678 240 aaKnown RBP10.87□□□□□ -0.67
RPS3A-214ENST00000515818 MCM6Q14566 821 aa10.87□□□□□ -0.67
RPS3A-214ENST00000515818 TRIM47Q96LD4 638 aa10.87□□□□□ -0.67
RPS3A-214ENST00000515818 NR1H3Q13133 447 aa10.86□□□□□ -0.67
RPS3A-214ENST00000515818 PPP1R26Q5T8A7 1209 aaPredicted RBP10.86□□□□□ -0.67
RPS3A-214ENST00000515818 EMILIN1Q9Y6C2 1016 aa10.86□□□□□ -0.67
RPS3A-214ENST00000515818 ESPNB1AK53 854 aa10.85□□□□□ -0.67
RPS3A-214ENST00000515818 TMEM132AQ24JP5 1023 aa10.85□□□□□ -0.67
RPS3A-214ENST00000515818 IRF5Q13568 498 aa10.84□□□□□ -0.67
RPS3A-214ENST00000515818 NBPF20Q3BBV1 942 aa10.84□□□□□ -0.67
RPS3A-214ENST00000515818 MRPL14Q6P1L8 145 aaKnown RBP10.84□□□□□ -0.67
RPS3A-214ENST00000515818 SENP2Q9HC62 589 aa10.84□□□□□ -0.67
RPS3A-214ENST00000515818 PCDHB9Q9Y5E1 797 aa10.84□□□□□ -0.67
RPS3A-214ENST00000515818 MEIOBQ8N635 442 aa10.83□□□□□ -0.68
RPS3A-214ENST00000515818 ZNF775Q96BV0 537 aaPredicted RBP10.83□□□□□ -0.68
RPS3A-214ENST00000515818 ZFP42Q96MM3 310 aa10.83□□□□□ -0.68
RPS3A-214ENST00000515818 KIFC2Q96AC6 838 aa10.82□□□□□ -0.68
RPS3A-214ENST00000515818 PURBQ96QR8 312 aaKnown RBP10.81□□□□□ -0.68
RPS3A-214ENST00000515818 GDPD2Q9HCC8 539 aa10.81□□□□□ -0.68
RPS3A-214ENST00000515818 TMPRSS4Q9NRS4 437 aa10.81□□□□□ -0.68
RPS3A-214ENST00000515818 GIGYF1O75420 1035 aaPredicted RBP10.8□□□□□ -0.68
RPS3A-214ENST00000515818 RAB15P59190 212 aa10.8□□□□□ -0.68
RPS3A-214ENST00000515818 DHX9Q08211 1270 aaKnown RBP10.8□□□□□ -0.68
RPS3A-214ENST00000515818 CBLBQ13191 982 aa10.8□□□□□ -0.68
RPS3A-214ENST00000515818 PGPEP1Q9NXJ5 209 aa10.8□□□□□ -0.68
RPS3A-214ENST00000515818 ERVH48-1M5A8F1 160 aa10.79□□□□□ -0.68
RPS3A-214ENST00000515818 Q6ZVU0 165 aa10.79□□□□□ -0.68
RPS3A-214ENST00000515818 LINC00528Q8N1L1 170 aa10.78□□□□□ -0.68
RPS3A-214ENST00000515818 SCARF1Q14162 830 aa10.77□□□□□ -0.69
RPS3A-214ENST00000515818 C6orf118Q5T5N4 469 aa10.77□□□□□ -0.69
RPS3A-214ENST00000515818 SEPT12Q8IYM1 358 aa10.77□□□□□ -0.69
RPS3A-214ENST00000515818 ZNF784Q8NCA9 323 aaPredicted RBP10.77□□□□□ -0.69
RPS3A-214ENST00000515818 PRM3Q9NNZ6 103 aa10.77□□□□□ -0.69
RPS3A-214ENST00000515818 LILRA1O75019 489 aa10.76□□□□□ -0.69
RPS3A-214ENST00000515818 ABL2P42684 1182 aa10.76□□□□□ -0.69
RPS3A-214ENST00000515818 COG6Q9Y2V7 657 aa10.76□□□□□ -0.69
RPS3A-214ENST00000515818 MCCD1P59942 119 aaPredicted RBP10.75□□□□□ -0.69
RPS3A-214ENST00000515818 ADD1P35611 737 aaKnown RBP10.74□□□□□ -0.69
RPS3A-214ENST00000515818 TSEN34Q9BSV6 310 aaKnown RBP10.74□□□□□ -0.69
RPS3A-214ENST00000515818 ZNF330Q9Y3S2 320 aaPredicted RBP10.74□□□□□ -0.69
RPS3A-214ENST00000515818 BMP2P12643 396 aa10.73□□□□□ -0.69
RPS3A-214ENST00000515818 VAC14Q08AM6 782 aa10.73□□□□□ -0.69
RPS3A-214ENST00000515818 POM121Q96HA1 1249 aa10.73□□□□□ -0.69
RPS3A-214ENST00000515818 UPP2O95045 317 aa10.72□□□□□ -0.69
RPS3A-214ENST00000515818 AGBL1Q96MI9 1066 aa10.72□□□□□ -0.69
RPS3A-214ENST00000515818 SOBPA7XYQ1 873 aa10.71□□□□□ -0.69
RPS3A-214ENST00000515818 KDF1Q8NAX2 398 aaPredicted RBP10.71□□□□□ -0.69
RPS3A-214ENST00000515818 CYLDQ9NQC7 956 aa10.71□□□□□ -0.69
RPS3A-214ENST00000515818 CEP126Q9P2H0 1117 aa10.71□□□□□ -0.69
RPS3A-214ENST00000515818 SOS2Q07890 1332 aaPredicted RBP10.7□□□□□ -0.7
RPS3A-214ENST00000515818 FLIIQ13045 1269 aa10.7□□□□□ -0.7
RPS3A-214ENST00000515818 ZNF592Q92610 1267 aa10.7□□□□□ -0.7
RPS3A-214ENST00000515818 SPINT1O43278 529 aa10.69□□□□□ -0.7
RPS3A-214ENST00000515818 ADH1AP07327 375 aa10.69□□□□□ -0.7
RPS3A-214ENST00000515818 LCE2AQ5TA79 106 aaPredicted RBP10.69□□□□□ -0.7
RPS3A-214ENST00000515818 RNF20Q5VTR2 975 aa10.69□□□□□ -0.7
RPS3A-214ENST00000515818 EIF4G2P78344 907 aaKnown RBP eCLIP10.68□□□□□ -0.7
RPS3A-214ENST00000515818 RELBQ01201 579 aa10.68□□□□□ -0.7
RPS3A-214ENST00000515818 ERVK-9P63128 1117 aa10.67□□□□□ -0.7
RPS3A-214ENST00000515818 NFX1Q12986 1120 aaKnown RBP10.67□□□□□ -0.7
RPS3A-214ENST00000515818 WASHC4Q2M389 1173 aa10.67□□□□□ -0.7
RPS3A-214ENST00000515818 CCDC125Q86Z20 511 aa10.67□□□□□ -0.7
RPS3A-214ENST00000515818 CCDC85AQ96PX6 553 aaPredicted RBP10.67□□□□□ -0.7
RPS3A-214ENST00000515818 DNMT3LQ9UJW3 386 aa10.67□□□□□ -0.7
RPS3A-214ENST00000515818 SCTRP47872 440 aa10.66□□□□□ -0.7
RPS3A-214ENST00000515818 TREML4Q6UXN2 200 aa10.66□□□□□ -0.7
RPS3A-214ENST00000515818 PHTF2Q8N3S3 785 aa10.66□□□□□ -0.7
RPS3A-214ENST00000515818 PCDHB11Q9Y5F2 797 aa10.66□□□□□ -0.7
RPS3A-214ENST00000515818 TERTO14746 1132 aaKnown RBP10.65□□□□□ -0.7
RPS3A-214ENST00000515818 MAN1A2O60476 641 aa10.65□□□□□ -0.7
RPS3A-214ENST00000515818 PTGIRP43119 386 aa10.65□□□□□ -0.7
RPS3A-214ENST00000515818 LCE2CQ5TA81 110 aa10.65□□□□□ -0.7
RPS3A-214ENST00000515818 ZNF395Q9H8N7 513 aaPredicted RBP10.65□□□□□ -0.7
RPS3A-214ENST00000515818 TTLL8A6PVC2 850 aa10.64□□□□□ -0.71
RPS3A-214ENST00000515818 UBTFP17480 764 aaKnown RBP10.64□□□□□ -0.71
RPS3A-214ENST00000515818 CTSOP43234 321 aaPredicted RBP10.64□□□□□ -0.71
RPS3A-214ENST00000515818 TSGA10IPQ3SY00 556 aa10.64□□□□□ -0.71
RPS3A-214ENST00000515818 CC2D2BQ6DHV5 1058 aa10.64□□□□□ -0.71
RPS3A-214ENST00000515818 INSM2Q96T92 566 aaPredicted RBP10.64□□□□□ -0.71
RPS3A-214ENST00000515818 CDCA7Q9BWT1 371 aaPredicted RBP10.64□□□□□ -0.71
RPS3A-214ENST00000515818 NXF1Q9UBU9 619 aaKnown RBP10.63□□□□□ -0.71
RPS3A-214ENST00000515818 FIGNL2A6NMB9 653 aa10.61□□□□□ -0.71
RPS3A-214ENST00000515818 RAD21O60216 631 aa10.61□□□□□ -0.71
RPS3A-214ENST00000515818 TRAK2O60296 914 aa10.61□□□□□ -0.71
RPS3A-214ENST00000515818 WFS1O76024 890 aa10.61□□□□□ -0.71
RPS3A-214ENST00000515818 OSBPL3Q9H4L5 887 aa10.61□□□□□ -0.71
RPS3A-214ENST00000515818 CHIC2Q9UKJ5 165 aa10.61□□□□□ -0.71
RPS3A-214ENST00000515818 ATP5J2-PTCD1G3V325 749 aa10.6□□□□□ -0.71
RPS3A-214ENST00000515818 VEGFBP49765 207 aa10.6□□□□□ -0.71
RPS3A-214ENST00000515818 FOXD4L5Q5VV16 416 aaPredicted RBP10.6□□□□□ -0.71
RPS3A-214ENST00000515818 SOX11P35716 441 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms